EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005008244 (Gene tree)
Gene ID: 101469236
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: ras-related protein Rab-18-B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 14492 bases
Position: chrLG18:19927265-19941756
Accession: 101469236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005010977	MMR_HSR1	PF01926.23	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005011356	-	2613	XM_004567197	ENSMZEP00005010977	205 (aa)	XP_004567254	UPI000329B90F
ENSMZET00005011369	-	546	-	ENSMZEP00005010990	181 (aa)	-	UPI0003AFB556

Gene Model

Click here to download ENSMZEG00005008244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005008244's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005008244	rab18b	99	85.366	ENSG00000099246	RAB18	99	85.714	Homo_sapiens
ENSMZEG00005008244	rab18b	100	96.585	ENSAPOG00000019881	rab18b	100	96.585	Acanthochromis_polyacanthus
ENSMZEG00005008244	rab18b	99	74.468	ENSAMEG00000015990	RAB18	99	74.468	Ailuropoda_melanoleuca
ENSMZEG00005008244	rab18b	100	98.049	ENSACIG00000008102	rab18b	100	98.049	Amphilophus_citrinellus
ENSMZEG00005008244	rab18b	100	97.073	ENSAOCG00000013479	rab18b	100	97.073	Amphiprion_ocellaris
ENSMZEG00005008244	rab18b	100	97.561	ENSAPEG00000022923	rab18b	100	97.561	Amphiprion_percula
ENSMZEG00005008244	rab18b	100	93.171	ENSATEG00000002952	rab18b	100	93.171	Anabas_testudineus
ENSMZEG00005008244	rab18b	99	85.366	ENSANAG00000035856	RAB18	99	85.366	Aotus_nancymaae
ENSMZEG00005008244	rab18b	100	100.000	ENSACLG00000015289	rab18b	100	100.000	Astatotilapia_calliptera
ENSMZEG00005008244	rab18b	99	87.745	ENSAMXG00000042073	rab18b	99	87.745	Astyanax_mexicanus
ENSMZEG00005008244	rab18b	99	83.415	ENSBTAG00000050873	-	99	83.415	Bos_taurus
ENSMZEG00005008244	rab18b	99	85.366	ENSBTAG00000009871	RAB18	88	85.366	Bos_taurus
ENSMZEG00005008244	rab18b	99	85.366	ENSCJAG00000045749	RAB18	99	85.366	Callithrix_jacchus
ENSMZEG00005008244	rab18b	99	85.366	ENSCAFG00020003253	RAB18	99	85.366	Canis_lupus_dingo
ENSMZEG00005008244	rab18b	99	85.366	ENSCHIG00000008749	RAB18	99	85.366	Capra_hircus
ENSMZEG00005008244	rab18b	99	84.878	ENSTSYG00000013092	RAB18	99	84.878	Carlito_syrichta
ENSMZEG00005008244	rab18b	99	85.366	ENSCPOG00000032827	RAB18	99	85.366	Cavia_porcellus
ENSMZEG00005008244	rab18b	99	85.366	ENSCCAG00000006762	RAB18	99	85.366	Cebus_capucinus
ENSMZEG00005008244	rab18b	99	85.366	ENSCATG00000009672	RAB18	99	85.366	Cercocebus_atys
ENSMZEG00005008244	rab18b	99	85.366	ENSCSAG00000011749	RAB18	99	85.366	Chlorocebus_sabaeus
ENSMZEG00005008244	rab18b	99	85.366	ENSCANG00000035397	RAB18	99	85.366	Colobus_angolensis_palliatus
ENSMZEG00005008244	rab18b	99	85.366	ENSCGRG00001017519	Rab18	99	85.366	Cricetulus_griseus_chok1gshd
ENSMZEG00005008244	rab18b	99	85.366	ENSCGRG00000017201	Rab18	99	85.366	Cricetulus_griseus_crigri
ENSMZEG00005008244	rab18b	95	94.845	ENSCSEG00000016803	rab18b	99	94.845	Cynoglossus_semilaevis
ENSMZEG00005008244	rab18b	99	89.216	ENSDARG00000098344	rab18b	99	89.216	Danio_rerio
ENSMZEG00005008244	rab18b	99	85.366	ENSDNOG00000047713	RAB18	99	85.366	Dasypus_novemcinctus
ENSMZEG00005008244	rab18b	55	87.611	ENSDNOG00000038845	-	75	87.611	Dasypus_novemcinctus
ENSMZEG00005008244	rab18b	99	84.878	ENSDORG00000028596	-	99	84.878	Dipodomys_ordii
ENSMZEG00005008244	rab18b	85	82.184	ENSDORG00000029360	-	83	82.184	Dipodomys_ordii
ENSMZEG00005008244	rab18b	99	85.366	ENSEASG00005007164	RAB18	99	85.366	Equus_asinus_asinus
ENSMZEG00005008244	rab18b	99	85.366	ENSECAG00000017521	RAB18	88	85.366	Equus_caballus
ENSMZEG00005008244	rab18b	100	86.893	ENSELUG00000016450	rab18b	100	86.893	Esox_lucius
ENSMZEG00005008244	rab18b	99	85.366	ENSFCAG00000027161	RAB18	99	85.366	Felis_catus
ENSMZEG00005008244	rab18b	94	86.458	ENSFALG00000007160	RAB18	99	84.466	Ficedula_albicollis
ENSMZEG00005008244	rab18b	100	92.195	ENSFHEG00000020035	rab18b	100	92.195	Fundulus_heteroclitus
ENSMZEG00005008244	rab18b	100	85.366	ENSGMOG00000016608	rab18b	100	85.366	Gadus_morhua
ENSMZEG00005008244	rab18b	99	85.366	ENSGALG00000007435	RAB18	99	85.366	Gallus_gallus
ENSMZEG00005008244	rab18b	100	93.659	ENSGAFG00000008560	rab18b	100	93.659	Gambusia_affinis
ENSMZEG00005008244	rab18b	100	91.220	ENSGACG00000016395	rab18b	100	91.220	Gasterosteus_aculeatus
ENSMZEG00005008244	rab18b	99	85.366	ENSGGOG00000008086	RAB18	99	85.366	Gorilla_gorilla
ENSMZEG00005008244	rab18b	100	100.000	ENSHBUG00000003696	rab18b	100	100.000	Haplochromis_burtoni
ENSMZEG00005008244	rab18b	99	86.408	ENSHGLG00000004365	RAB18	99	86.408	Heterocephalus_glaber_female
ENSMZEG00005008244	rab18b	99	72.059	ENSHGLG00000007301	-	95	72.059	Heterocephalus_glaber_female
ENSMZEG00005008244	rab18b	99	72.059	ENSHGLG00100009117	-	95	72.059	Heterocephalus_glaber_male
ENSMZEG00005008244	rab18b	99	86.408	ENSHGLG00100013089	-	99	86.408	Heterocephalus_glaber_male
ENSMZEG00005008244	rab18b	100	93.659	ENSHCOG00000002217	rab18b	100	93.659	Hippocampus_comes
ENSMZEG00005008244	rab18b	99	85.294	ENSIPUG00000010859	rab18b	99	85.294	Ictalurus_punctatus
ENSMZEG00005008244	rab18b	99	85.366	ENSSTOG00000014560	-	99	85.366	Ictidomys_tridecemlineatus
ENSMZEG00005008244	rab18b	100	92.195	ENSKMAG00000007364	rab18b	100	92.195	Kryptolebias_marmoratus
ENSMZEG00005008244	rab18b	100	93.171	ENSLBEG00000019428	rab18b	100	93.171	Labrus_bergylta
ENSMZEG00005008244	rab18b	99	76.961	ENSLACG00000011256	rab18b	99	76.961	Latimeria_chalumnae
ENSMZEG00005008244	rab18b	94	86.979	ENSLAFG00000015582	RAB18	99	85.366	Loxodonta_africana
ENSMZEG00005008244	rab18b	99	85.366	ENSMFAG00000006430	RAB18	99	85.366	Macaca_fascicularis
ENSMZEG00005008244	rab18b	99	83.902	ENSMMUG00000046971	RAB18	74	83.902	Macaca_mulatta
ENSMZEG00005008244	rab18b	99	85.366	ENSMNEG00000038180	RAB18	99	85.366	Macaca_nemestrina
ENSMZEG00005008244	rab18b	99	85.366	ENSMLEG00000033595	RAB18	99	85.366	Mandrillus_leucophaeus
ENSMZEG00005008244	rab18b	99	94.118	ENSMAMG00000018445	rab18b	99	94.118	Mastacembelus_armatus
ENSMZEG00005008244	rab18b	99	75.980	ENSMAUG00000020698	-	99	75.980	Mesocricetus_auratus
ENSMZEG00005008244	rab18b	94	86.979	ENSMICG00000017280	RAB18	99	85.366	Microcebus_murinus
ENSMZEG00005008244	rab18b	99	85.366	ENSMOCG00000013044	Rab18	99	85.366	Microtus_ochrogaster
ENSMZEG00005008244	rab18b	100	76.498	ENSMMOG00000017849	rab18b	100	77.880	Mola_mola
ENSMZEG00005008244	rab18b	99	86.275	ENSMODG00000008253	RAB18	99	86.275	Monodelphis_domestica
ENSMZEG00005008244	rab18b	99	77.451	ENSMODG00000024936	-	99	77.451	Monodelphis_domestica
ENSMZEG00005008244	rab18b	99	94.118	ENSMALG00000005069	rab18b	99	94.118	Monopterus_albus
ENSMZEG00005008244	rab18b	99	85.854	MGP_CAROLIEiJ_G0021978	Rab18	99	85.854	Mus_caroli
ENSMZEG00005008244	rab18b	99	85.854	ENSMUSG00000073639	Rab18	99	85.854	Mus_musculus
ENSMZEG00005008244	rab18b	99	85.854	MGP_PahariEiJ_G0018716	Rab18	99	85.854	Mus_pahari
ENSMZEG00005008244	rab18b	99	85.854	MGP_SPRETEiJ_G0022894	Rab18	99	85.854	Mus_spretus
ENSMZEG00005008244	rab18b	99	85.366	ENSMPUG00000010592	RAB18	99	85.366	Mustela_putorius_furo
ENSMZEG00005008244	rab18b	99	74.468	ENSMLUG00000027295	RAB18	99	74.468	Myotis_lucifugus
ENSMZEG00005008244	rab18b	99	85.366	ENSNGAG00000001465	Rab18	99	85.366	Nannospalax_galili
ENSMZEG00005008244	rab18b	100	99.512	ENSNBRG00000008137	rab18b	100	99.512	Neolamprologus_brichardi
ENSMZEG00005008244	rab18b	99	85.366	ENSNLEG00000016970	RAB18	99	85.366	Nomascus_leucogenys
ENSMZEG00005008244	rab18b	99	85.366	ENSODEG00000004150	-	99	85.366	Octodon_degus
ENSMZEG00005008244	rab18b	100	99.512	ENSONIG00000018673	rab18b	100	99.512	Oreochromis_niloticus
ENSMZEG00005008244	rab18b	91	89.305	ENSOANG00000021391	RAB18	99	85.922	Ornithorhynchus_anatinus
ENSMZEG00005008244	rab18b	99	84.390	ENSOCUG00000022307	RAB18	99	84.390	Oryctolagus_cuniculus
ENSMZEG00005008244	rab18b	100	91.707	ENSORLG00000009609	rab18b	100	91.707	Oryzias_latipes
ENSMZEG00005008244	rab18b	100	91.707	ENSORLG00020011590	rab18b	100	91.707	Oryzias_latipes_hni
ENSMZEG00005008244	rab18b	100	91.707	ENSORLG00015007182	rab18b	100	91.707	Oryzias_latipes_hsok
ENSMZEG00005008244	rab18b	100	91.707	ENSOMEG00000007546	rab18b	100	91.707	Oryzias_melastigma
ENSMZEG00005008244	rab18b	94	86.979	ENSOGAG00000028015	RAB18	99	85.366	Otolemur_garnettii
ENSMZEG00005008244	rab18b	99	85.366	ENSOARG00000016208	RAB18	99	85.366	Ovis_aries
ENSMZEG00005008244	rab18b	99	85.366	ENSPPAG00000041625	RAB18	99	85.366	Pan_paniscus
ENSMZEG00005008244	rab18b	99	85.366	ENSPPRG00000010314	RAB18	99	85.366	Panthera_pardus
ENSMZEG00005008244	rab18b	99	85.366	ENSPTIG00000011667	RAB18	99	85.366	Panthera_tigris_altaica
ENSMZEG00005008244	rab18b	99	85.366	ENSPTRG00000002384	RAB18	99	85.366	Pan_troglodytes
ENSMZEG00005008244	rab18b	99	85.366	ENSPANG00000023005	RAB18	99	85.366	Papio_anubis
ENSMZEG00005008244	rab18b	98	84.804	ENSPMAG00000005322	rab18b	98	84.804	Petromyzon_marinus
ENSMZEG00005008244	rab18b	99	86.765	ENSPCIG00000028705	-	88	86.765	Phascolarctos_cinereus
ENSMZEG00005008244	rab18b	100	94.146	ENSPFOG00000013491	rab18b	100	94.146	Poecilia_formosa
ENSMZEG00005008244	rab18b	100	94.146	ENSPLAG00000019136	rab18b	100	94.146	Poecilia_latipinna
ENSMZEG00005008244	rab18b	100	94.146	ENSPMEG00000008223	rab18b	100	94.146	Poecilia_mexicana
ENSMZEG00005008244	rab18b	99	85.366	ENSPPYG00000002172	RAB18	99	85.366	Pongo_abelii
ENSMZEG00005008244	rab18b	94	86.979	ENSPCOG00000018906	RAB18	99	85.366	Propithecus_coquereli
ENSMZEG00005008244	rab18b	100	100.000	ENSPNYG00000001751	rab18b	100	100.000	Pundamilia_nyererei
ENSMZEG00005008244	rab18b	99	86.765	ENSPNAG00000002404	rab18b	99	86.765	Pygocentrus_nattereri
ENSMZEG00005008244	rab18b	99	85.366	ENSRNOG00000018972	Rab18	99	85.366	Rattus_norvegicus
ENSMZEG00005008244	rab18b	99	84.878	ENSRBIG00000035948	RAB18	99	84.878	Rhinopithecus_bieti
ENSMZEG00005008244	rab18b	99	85.366	ENSRROG00000040563	RAB18	99	85.366	Rhinopithecus_roxellana
ENSMZEG00005008244	rab18b	99	86.765	ENSSHAG00000007613	RAB18	99	86.765	Sarcophilus_harrisii
ENSMZEG00005008244	rab18b	100	95.122	ENSSMAG00000011814	rab18b	100	95.122	Scophthalmus_maximus
ENSMZEG00005008244	rab18b	100	96.585	ENSSDUG00000005960	rab18b	100	96.585	Seriola_dumerili
ENSMZEG00005008244	rab18b	100	96.585	ENSSLDG00000006014	rab18b	100	96.585	Seriola_lalandi_dorsalis
ENSMZEG00005008244	rab18b	100	97.561	ENSSPAG00000020875	rab18b	100	97.561	Stegastes_partitus
ENSMZEG00005008244	rab18b	99	85.366	ENSSSCG00000028655	RAB18	99	85.366	Sus_scrofa
ENSMZEG00005008244	rab18b	94	75.799	ENSTGUG00000001105	-	99	74.678	Taeniopygia_guttata
ENSMZEG00005008244	rab18b	100	89.268	ENSTRUG00000004283	rab18b	100	89.268	Takifugu_rubripes
ENSMZEG00005008244	rab18b	100	87.864	ENSTNIG00000007882	rab18b	100	87.864	Tetraodon_nigroviridis
ENSMZEG00005008244	rab18b	99	85.366	ENSVVUG00000001705	RAB18	99	85.366	Vulpes_vulpes
ENSMZEG00005008244	rab18b	100	93.171	ENSXMAG00000006945	rab18b	100	93.171	Xiphophorus_maculatus