EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005008301 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 140224 bases
Position: chrLG23:37534955-37675178
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005011073	MMR_HSR1	PF01926.23	2.2e-05	1	1
ENSMZEP00005011066	MMR_HSR1	PF01926.23	2.6e-05	1	1
ENSMZEP00005011082	MMR_HSR1	PF01926.23	3.9e-05	1	1
ENSMZEP00005011058	MMR_HSR1	PF01926.23	4.1e-05	1	1
ENSMZEP00005011048	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005011456	-	1222	-	ENSMZEP00005011073	267 (aa)	-	-
ENSMZET00005011465	-	1222	-	ENSMZEP00005011082	267 (aa)	-	-
ENSMZET00005011431	-	1541	-	ENSMZEP00005011048	267 (aa)	-	-
ENSMZET00005011449	-	1410	-	ENSMZEP00005011066	265 (aa)	-	-
ENSMZET00005011441	-	1541	-	ENSMZEP00005011058	267 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005008301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005008301's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005008301	-	93	42.742	ENSACIG00000015237	-	92	43.600	Amphilophus_citrinellus
ENSMZEG00005008301	-	98	70.115	ENSACIG00000004426	-	90	70.115	Amphilophus_citrinellus
ENSMZEG00005008301	-	97	63.320	ENSACIG00000000741	-	92	63.320	Amphilophus_citrinellus
ENSMZEG00005008301	-	98	68.321	ENSACIG00000004521	-	92	68.321	Amphilophus_citrinellus
ENSMZEG00005008301	-	98	70.229	ENSACIG00000004444	-	95	70.229	Amphilophus_citrinellus
ENSMZEG00005008301	-	99	72.243	ENSACIG00000015684	-	95	71.698	Amphilophus_citrinellus
ENSMZEG00005008301	-	96	68.627	ENSACIG00000004501	-	89	68.627	Amphilophus_citrinellus
ENSMZEG00005008301	-	98	68.441	ENSACIG00000004408	-	91	69.349	Amphilophus_citrinellus
ENSMZEG00005008301	-	100	74.717	ENSACIG00000015616	-	97	72.075	Amphilophus_citrinellus
ENSMZEG00005008301	-	99	62.642	ENSAOCG00000002056	-	88	62.642	Amphiprion_ocellaris
ENSMZEG00005008301	-	99	62.500	ENSAPEG00000021053	-	93	62.452	Amphiprion_percula
ENSMZEG00005008301	-	95	47.266	ENSATEG00000002718	-	80	47.266	Anabas_testudineus
ENSMZEG00005008301	-	98	48.649	ENSATEG00000002869	-	93	49.421	Anabas_testudineus
ENSMZEG00005008301	-	100	80.451	ENSACLG00000027615	-	100	80.451	Astatotilapia_calliptera
ENSMZEG00005008301	-	96	50.000	ENSACLG00000002020	-	94	50.000	Astatotilapia_calliptera
ENSMZEG00005008301	-	97	60.385	ENSACLG00000016390	-	94	60.385	Astatotilapia_calliptera
ENSMZEG00005008301	-	97	74.708	ENSACLG00000016487	-	88	73.664	Astatotilapia_calliptera
ENSMZEG00005008301	-	98	47.348	ENSACLG00000018321	-	92	47.348	Astatotilapia_calliptera
ENSMZEG00005008301	-	98	46.617	ENSACLG00000010292	-	94	46.617	Astatotilapia_calliptera
ENSMZEG00005008301	-	91	39.344	ENSAMXG00000037563	-	86	39.344	Astyanax_mexicanus
ENSMZEG00005008301	-	98	51.527	ENSCSEG00000018832	-	97	51.527	Cynoglossus_semilaevis
ENSMZEG00005008301	-	96	45.594	ENSCVAG00000007214	-	98	47.082	Cyprinodon_variegatus
ENSMZEG00005008301	-	95	45.059	ENSCVAG00000023166	-	96	45.455	Cyprinodon_variegatus
ENSMZEG00005008301	-	97	45.385	ENSCVAG00000016719	-	90	45.385	Cyprinodon_variegatus
ENSMZEG00005008301	-	67	43.333	ENSCVAG00000014640	-	83	43.333	Cyprinodon_variegatus
ENSMZEG00005008301	-	98	41.353	ENSDARG00000095673	si:dkey-79f11.8	81	41.353	Danio_rerio
ENSMZEG00005008301	-	88	39.076	ENSDARG00000029720	si:dkeyp-9d4.2	80	39.076	Danio_rerio
ENSMZEG00005008301	-	99	38.113	ENSDARG00000092634	CABZ01000634.1	89	38.113	Danio_rerio
ENSMZEG00005008301	-	92	42.449	ENSDARG00000107486	CR855320.3	82	42.449	Danio_rerio
ENSMZEG00005008301	-	99	38.491	ENSDARG00000093857	si:dkey-79f11.10	82	38.636	Danio_rerio
ENSMZEG00005008301	-	78	46.890	ENSDARG00000015678	si:dkeyp-75b4.9	99	46.890	Danio_rerio
ENSMZEG00005008301	-	67	34.831	ENSDARG00000092361	si:dkey-79f11.7	75	35.393	Danio_rerio
ENSMZEG00005008301	-	92	37.143	ENSDARG00000010729	CABZ01073795.1	85	37.143	Danio_rerio
ENSMZEG00005008301	-	92	37.500	ENSDARG00000095309	si:dkey-79f11.9	88	37.500	Danio_rerio
ENSMZEG00005008301	-	92	40.408	ENSDARG00000075791	si:dkey-79f11.5	78	40.408	Danio_rerio
ENSMZEG00005008301	-	96	48.837	ENSFHEG00000021105	-	87	48.837	Fundulus_heteroclitus
ENSMZEG00005008301	-	96	50.391	ENSFHEG00000018069	-	87	50.391	Fundulus_heteroclitus
ENSMZEG00005008301	-	78	49.057	ENSFHEG00000019992	-	71	49.057	Fundulus_heteroclitus
ENSMZEG00005008301	-	97	41.860	ENSFHEG00000018078	-	94	41.860	Fundulus_heteroclitus
ENSMZEG00005008301	-	98	44.828	ENSGAFG00000019423	-	57	45.594	Gambusia_affinis
ENSMZEG00005008301	-	92	44.130	ENSGAFG00000019422	-	95	44.130	Gambusia_affinis
ENSMZEG00005008301	-	99	54.167	ENSGACG00000012548	-	88	55.172	Gasterosteus_aculeatus
ENSMZEG00005008301	-	99	56.061	ENSGACG00000001319	-	98	56.061	Gasterosteus_aculeatus
ENSMZEG00005008301	-	98	56.322	ENSGACG00000012556	-	84	56.705	Gasterosteus_aculeatus
ENSMZEG00005008301	-	93	86.290	ENSHBUG00000010945	-	92	86.290	Haplochromis_burtoni
ENSMZEG00005008301	-	99	43.182	ENSIPUG00000006852	-	82	43.182	Ictalurus_punctatus
ENSMZEG00005008301	-	72	33.163	ENSIPUG00000006725	-	94	33.163	Ictalurus_punctatus
ENSMZEG00005008301	-	95	43.307	ENSIPUG00000007632	-	70	44.082	Ictalurus_punctatus
ENSMZEG00005008301	-	99	42.105	ENSIPUG00000005624	-	97	42.105	Ictalurus_punctatus
ENSMZEG00005008301	-	94	53.600	ENSKMAG00000006729	-	93	53.600	Kryptolebias_marmoratus
ENSMZEG00005008301	-	94	53.543	ENSKMAG00000000325	-	91	53.543	Kryptolebias_marmoratus
ENSMZEG00005008301	-	95	52.549	ENSKMAG00000000369	-	94	52.549	Kryptolebias_marmoratus
ENSMZEG00005008301	-	96	55.642	ENSMAMG00000003570	-	90	55.642	Mastacembelus_armatus
ENSMZEG00005008301	-	98	44.361	ENSMAMG00000003546	-	86	45.977	Mastacembelus_armatus
ENSMZEG00005008301	-	98	46.212	ENSMZEG00005015498	-	93	46.212	Maylandia_zebra
ENSMZEG00005008301	-	99	75.000	ENSMZEG00005008329	-	100	75.000	Maylandia_zebra
ENSMZEG00005008301	-	99	74.046	ENSNBRG00000022075	-	93	72.414	Neolamprologus_brichardi
ENSMZEG00005008301	-	97	49.425	ENSNBRG00000023290	-	88	49.425	Neolamprologus_brichardi
ENSMZEG00005008301	-	100	88.679	ENSNBRG00000006386	-	100	88.679	Neolamprologus_brichardi
ENSMZEG00005008301	-	99	75.094	ENSNBRG00000020806	-	91	75.094	Neolamprologus_brichardi
ENSMZEG00005008301	-	97	68.726	ENSNBRG00000020744	-	88	68.726	Neolamprologus_brichardi
ENSMZEG00005008301	-	99	74.621	ENSNBRG00000006414	-	89	74.621	Neolamprologus_brichardi
ENSMZEG00005008301	-	98	47.348	ENSNBRG00000024253	-	89	47.348	Neolamprologus_brichardi
ENSMZEG00005008301	-	94	84.677	ENSNBRG00000020781	-	100	84.677	Neolamprologus_brichardi
ENSMZEG00005008301	-	99	82.824	ENSONIG00000015247	-	93	82.824	Oreochromis_niloticus
ENSMZEG00005008301	-	97	82.558	ENSONIG00000015167	-	100	82.558	Oreochromis_niloticus
ENSMZEG00005008301	-	91	51.852	ENSONIG00000016843	-	98	51.852	Oreochromis_niloticus
ENSMZEG00005008301	-	97	43.130	ENSONIG00000018790	-	89	43.893	Oreochromis_niloticus
ENSMZEG00005008301	-	68	90.055	ENSONIG00000013227	-	100	90.055	Oreochromis_niloticus
ENSMZEG00005008301	-	92	77.959	ENSONIG00000012317	-	98	77.959	Oreochromis_niloticus
ENSMZEG00005008301	-	97	86.434	ENSONIG00000012319	-	99	86.434	Oreochromis_niloticus
ENSMZEG00005008301	-	93	81.781	ENSONIG00000017465	-	100	81.781	Oreochromis_niloticus
ENSMZEG00005008301	-	97	75.391	ENSONIG00000015371	-	100	75.391	Oreochromis_niloticus
ENSMZEG00005008301	-	97	48.047	ENSPMGG00000022341	-	77	47.104	Periophthalmus_magnuspinnatus
ENSMZEG00005008301	-	93	49.801	ENSPMGG00000002695	-	95	49.801	Periophthalmus_magnuspinnatus
ENSMZEG00005008301	-	98	51.711	ENSPMGG00000012906	-	93	51.711	Periophthalmus_magnuspinnatus
ENSMZEG00005008301	-	97	44.828	ENSPMGG00000004994	-	90	44.828	Periophthalmus_magnuspinnatus
ENSMZEG00005008301	-	98	45.833	ENSPFOG00000015493	-	89	46.304	Poecilia_formosa
ENSMZEG00005008301	-	96	46.693	ENSPFOG00000003841	-	88	46.693	Poecilia_formosa
ENSMZEG00005008301	-	98	47.308	ENSPFOG00000015455	-	87	47.308	Poecilia_formosa
ENSMZEG00005008301	-	97	47.308	ENSPFOG00000003807	-	91	47.308	Poecilia_formosa
ENSMZEG00005008301	-	98	46.008	ENSPFOG00000015382	-	92	46.768	Poecilia_formosa
ENSMZEG00005008301	-	96	46.899	ENSPLAG00000018274	-	91	46.899	Poecilia_latipinna
ENSMZEG00005008301	-	98	46.923	ENSPMEG00000018626	-	92	46.923	Poecilia_mexicana
ENSMZEG00005008301	-	98	45.833	ENSPMEG00000018635	-	92	46.591	Poecilia_mexicana
ENSMZEG00005008301	-	96	48.756	ENSPREG00000005137	-	90	48.756	Poecilia_reticulata
ENSMZEG00005008301	-	97	46.743	ENSPNYG00000001584	-	91	46.743	Pundamilia_nyererei
ENSMZEG00005008301	-	95	78.740	ENSPNYG00000005478	-	88	78.740	Pundamilia_nyererei
ENSMZEG00005008301	-	98	73.359	ENSPNYG00000024019	-	88	73.359	Pundamilia_nyererei
ENSMZEG00005008301	-	98	39.080	ENSPNAG00000009266	-	95	39.313	Pygocentrus_nattereri
ENSMZEG00005008301	-	95	35.581	ENSPNAG00000006327	-	65	36.330	Pygocentrus_nattereri
ENSMZEG00005008301	-	99	49.621	ENSSDUG00000002417	-	98	50.000	Seriola_dumerili
ENSMZEG00005008301	-	99	49.242	ENSSDUG00000002359	-	98	49.621	Seriola_dumerili
ENSMZEG00005008301	-	97	48.837	ENSSLDG00000016397	-	95	49.612	Seriola_lalandi_dorsalis
ENSMZEG00005008301	-	99	50.566	ENSSLDG00000008952	-	93	50.379	Seriola_lalandi_dorsalis
ENSMZEG00005008301	-	98	61.303	ENSSPAG00000012915	-	98	61.686	Stegastes_partitus
ENSMZEG00005008301	-	97	63.566	ENSSPAG00000012856	-	91	63.566	Stegastes_partitus
ENSMZEG00005008301	-	68	45.109	ENSXCOG00000008517	-	57	45.109	Xiphophorus_couchianus
ENSMZEG00005008301	-	86	43.723	ENSXCOG00000019639	-	88	43.723	Xiphophorus_couchianus
ENSMZEG00005008301	-	62	47.619	ENSXCOG00000003913	-	87	47.619	Xiphophorus_couchianus
ENSMZEG00005008301	-	98	44.487	ENSXMAG00000009971	-	69	44.487	Xiphophorus_maculatus
ENSMZEG00005008301	-	97	50.192	ENSXMAG00000029117	-	92	50.192	Xiphophorus_maculatus
ENSMZEG00005008301	-	98	46.617	ENSXMAG00000009973	-	94	46.617	Xiphophorus_maculatus