EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005008476 (Gene tree)
Gene ID: 101470581
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 21369 bases
Position: chrLG12:22892015-22913383
Accession: 101470581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005011304	PAM2	PF07145.15	7.6e-06	1	1
ENSMZEP00005011282	PAM2	PF07145.15	7.6e-06	1	1
ENSMZEP00005011268	PAM2	PF07145.15	7.7e-06	1	1
ENSMZEP00005011304	LsmAD	PF06741.13	2.7e-14	1	1
ENSMZEP00005011282	LsmAD	PF06741.13	2.7e-14	1	1
ENSMZEP00005011268	LsmAD	PF06741.13	2.7e-14	1	1
ENSMZEP00005011304	SM-ATX	PF14438.6	6.2e-21	1	1
ENSMZEP00005011268	SM-ATX	PF14438.6	6.2e-21	1	1
ENSMZEP00005011282	SM-ATX	PF14438.6	7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005011698	-	5077	XM_012918053	ENSMZEP00005011304	1047 (aa)	XP_012773507	-
ENSMZET00005011674	-	5080	XM_012918052	ENSMZEP00005011282	1048 (aa)	XP_012773506	-
ENSMZET00005011660	-	5095	XM_004547105	ENSMZEP00005011268	1053 (aa)	XP_004547162	UPI000329E93D

Gene Model

Click here to download ENSMZEG00005008476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005008476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005008476	atxn2	76	70.847	ENSG00000204842	ATXN2	90	73.333	Homo_sapiens
ENSMZEG00005008476	atxn2	100	91.132	ENSAPOG00000014663	atxn2	99	92.249	Acanthochromis_polyacanthus
ENSMZEG00005008476	atxn2	96	69.677	ENSAMEG00000013747	ATXN2	95	70.418	Ailuropoda_melanoleuca
ENSMZEG00005008476	atxn2	99	91.292	ENSAOCG00000001107	atxn2	99	91.675	Amphiprion_ocellaris
ENSMZEG00005008476	atxn2	99	91.412	ENSAPEG00000020250	atxn2	99	91.770	Amphiprion_percula
ENSMZEG00005008476	atxn2	93	93.190	ENSATEG00000018587	atxn2	92	93.190	Anabas_testudineus
ENSMZEG00005008476	atxn2	94	71.280	ENSANAG00000022522	ATXN2	95	71.034	Aotus_nancymaae
ENSMZEG00005008476	atxn2	99	73.106	ENSAMXG00000002342	atxn2	99	71.851	Astyanax_mexicanus
ENSMZEG00005008476	atxn2	95	72.535	ENSBTAG00000022069	ATXN2	99	49.174	Bos_taurus
ENSMZEG00005008476	atxn2	96	71.186	ENSCAFG00000008606	ATXN2	81	45.796	Canis_familiaris
ENSMZEG00005008476	atxn2	97	69.937	ENSCHIG00000012141	ATXN2	77	70.000	Capra_hircus
ENSMZEG00005008476	atxn2	73	80.531	ENSCAPG00000013332	ATXN2	83	80.531	Cavia_aperea
ENSMZEG00005008476	atxn2	96	69.667	ENSCSAG00000002590	ATXN2	94	49.425	Chlorocebus_sabaeus
ENSMZEG00005008476	atxn2	75	63.033	ENSCHOG00000004284	ATXN2	78	63.033	Choloepus_hoffmanni
ENSMZEG00005008476	atxn2	95	59.324	ENSCPBG00000003465	ATXN2	99	59.687	Chrysemys_picta_bellii
ENSMZEG00005008476	atxn2	95	61.279	ENSCGRG00001022603	Atxn2	79	62.025	Cricetulus_griseus_chok1gshd
ENSMZEG00005008476	atxn2	97	69.108	ENSCGRG00000015823	Atxn2	94	69.841	Cricetulus_griseus_crigri
ENSMZEG00005008476	atxn2	100	84.594	ENSCSEG00000018366	atxn2	99	84.608	Cynoglossus_semilaevis
ENSMZEG00005008476	atxn2	100	83.822	ENSCSEG00000009072	-	99	83.828	Cynoglossus_semilaevis
ENSMZEG00005008476	atxn2	94	88.645	ENSCVAG00000020160	atxn2	99	84.327	Cyprinodon_variegatus
ENSMZEG00005008476	atxn2	96	69.900	ENSDNOG00000015696	ATXN2	100	47.619	Dasypus_novemcinctus
ENSMZEG00005008476	atxn2	90	61.111	ENSETEG00000005224	ATXN2	72	61.111	Echinops_telfairi
ENSMZEG00005008476	atxn2	96	70.418	ENSEASG00005012077	ATXN2	99	59.824	Equus_asinus_asinus
ENSMZEG00005008476	atxn2	97	70.513	ENSECAG00000014347	ATXN2	80	47.091	Equus_caballus
ENSMZEG00005008476	atxn2	74	69.180	ENSEEUG00000014635	-	71	69.180	Erinaceus_europaeus
ENSMZEG00005008476	atxn2	99	70.217	ENSELUG00000019632	atxn2	99	70.409	Esox_lucius
ENSMZEG00005008476	atxn2	96	71.148	ENSFDAG00000020942	ATXN2	100	49.645	Fukomys_damarensis
ENSMZEG00005008476	atxn2	91	84.984	ENSFHEG00000019561	atxn2	98	85.152	Fundulus_heteroclitus
ENSMZEG00005008476	atxn2	88	90.625	ENSGMOG00000007412	atxn2	92	77.099	Gadus_morhua
ENSMZEG00005008476	atxn2	94	92.708	ENSGAFG00000003302	atxn2	99	84.785	Gambusia_affinis
ENSMZEG00005008476	atxn2	95	60.374	ENSGAGG00000005014	ATXN2	99	60.757	Gopherus_agassizii
ENSMZEG00005008476	atxn2	100	99.905	ENSHBUG00000002921	atxn2	100	99.905	Haplochromis_burtoni
ENSMZEG00005008476	atxn2	96	71.148	ENSHGLG00100019351	ATXN2	100	49.778	Heterocephalus_glaber_male
ENSMZEG00005008476	atxn2	99	82.342	ENSHCOG00000005278	atxn2	95	82.386	Hippocampus_comes
ENSMZEG00005008476	atxn2	97	70.165	ENSIPUG00000016649	atxn2	99	69.991	Ictalurus_punctatus
ENSMZEG00005008476	atxn2	68	53.772	ENSSTOG00000000978	ATXN2	98	54.085	Ictidomys_tridecemlineatus
ENSMZEG00005008476	atxn2	100	86.038	ENSKMAG00000000980	atxn2	99	86.135	Kryptolebias_marmoratus
ENSMZEG00005008476	atxn2	59	79.194	ENSLBEG00000017484	atxn2	95	78.045	Labrus_bergylta
ENSMZEG00005008476	atxn2	96	75.163	ENSLACG00000012531	ATXN2	94	74.679	Latimeria_chalumnae
ENSMZEG00005008476	atxn2	97	80.844	ENSLOCG00000007880	atxn2	91	80.844	Lepisosteus_oculatus
ENSMZEG00005008476	atxn2	97	71.104	ENSLAFG00000007416	ATXN2	96	55.022	Loxodonta_africana
ENSMZEG00005008476	atxn2	95	70.242	ENSMMUG00000002226	ATXN2	100	49.457	Macaca_mulatta
ENSMZEG00005008476	atxn2	89	69.333	ENSMNEG00000035588	ATXN2	100	48.343	Macaca_nemestrina
ENSMZEG00005008476	atxn2	99	89.378	ENSMAMG00000019160	atxn2	98	89.665	Mastacembelus_armatus
ENSMZEG00005008476	atxn2	65	54.585	ENSMAUG00000008223	-	97	53.936	Mesocricetus_auratus
ENSMZEG00005008476	atxn2	58	55.161	ENSMICG00000013541	ATXN2	95	71.724	Microcebus_murinus
ENSMZEG00005008476	atxn2	81	71.905	ENSMOCG00000005219	Atxn2	97	53.499	Microtus_ochrogaster
ENSMZEG00005008476	atxn2	94	91.039	ENSMMOG00000013189	atxn2	93	91.039	Mola_mola
ENSMZEG00005008476	atxn2	99	88.038	ENSMALG00000018529	atxn2	99	87.847	Monopterus_albus
ENSMZEG00005008476	atxn2	95	69.625	MGP_CAROLIEiJ_G0027692	Atxn2	89	68.770	Mus_caroli
ENSMZEG00005008476	atxn2	95	68.792	ENSMUSG00000042605	Atxn2	94	58.147	Mus_musculus
ENSMZEG00005008476	atxn2	65	53.648	MGP_PahariEiJ_G0024272	Atxn2	96	52.770	Mus_pahari
ENSMZEG00005008476	atxn2	95	69.966	MGP_SPRETEiJ_G0028690	Atxn2	91	68.981	Mus_spretus
ENSMZEG00005008476	atxn2	96	63.548	ENSMPUG00000002212	ATXN2	100	47.420	Mustela_putorius_furo
ENSMZEG00005008476	atxn2	97	71.429	ENSMLUG00000015559	ATXN2	99	48.743	Myotis_lucifugus
ENSMZEG00005008476	atxn2	94	99.283	ENSNBRG00000015794	atxn2	92	99.283	Neolamprologus_brichardi
ENSMZEG00005008476	atxn2	83	73.885	ENSMEUG00000012244	-	79	73.006	Notamacropus_eugenii
ENSMZEG00005008476	atxn2	95	62.799	ENSOPRG00000014599	ATXN2	94	62.542	Ochotona_princeps
ENSMZEG00005008476	atxn2	95	71.831	ENSODEG00000010798	ATXN2	100	45.570	Octodon_degus
ENSMZEG00005008476	atxn2	68	93.655	ENSONIG00000014521	atxn2	64	92.966	Oreochromis_niloticus
ENSMZEG00005008476	atxn2	96	69.608	ENSOCUG00000002855	ATXN2	66	69.231	Oryctolagus_cuniculus
ENSMZEG00005008476	atxn2	94	84.995	ENSORLG00000003606	atxn2	99	84.717	Oryzias_latipes
ENSMZEG00005008476	atxn2	99	83.923	ENSORLG00020000785	atxn2	99	84.312	Oryzias_latipes_hni
ENSMZEG00005008476	atxn2	99	85.072	ENSORLG00015012345	atxn2	99	84.976	Oryzias_latipes_hsok
ENSMZEG00005008476	atxn2	99	83.381	ENSOMEG00000020080	atxn2	99	84.004	Oryzias_melastigma
ENSMZEG00005008476	atxn2	97	71.429	ENSOARG00000018223	ATXN2	99	49.551	Ovis_aries
ENSMZEG00005008476	atxn2	95	70.934	ENSPTIG00000021122	ATXN2	100	49.139	Panthera_tigris_altaica
ENSMZEG00005008476	atxn2	97	73.223	ENSPKIG00000023134	atxn2	99	71.756	Paramormyrops_kingsleyae
ENSMZEG00005008476	atxn2	96	73.203	ENSPSIG00000002353	-	95	72.756	Pelodiscus_sinensis
ENSMZEG00005008476	atxn2	95	91.756	ENSPMGG00000005074	atxn2	93	91.756	Periophthalmus_magnuspinnatus
ENSMZEG00005008476	atxn2	65	54.363	ENSPEMG00000015340	Atxn2	97	53.790	Peromyscus_maniculatus_bairdii
ENSMZEG00005008476	atxn2	55	57.530	ENSPCIG00000006165	-	89	71.809	Phascolarctos_cinereus
ENSMZEG00005008476	atxn2	97	85.574	ENSPLAG00000015241	atxn2	99	84.504	Poecilia_latipinna
ENSMZEG00005008476	atxn2	97	86.163	ENSPMEG00000016681	atxn2	99	85.082	Poecilia_mexicana
ENSMZEG00005008476	atxn2	95	91.986	ENSPREG00000014825	atxn2	99	85.728	Poecilia_reticulata
ENSMZEG00005008476	atxn2	96	71.525	ENSPVAG00000013179	ATXN2	76	70.662	Pteropus_vampyrus
ENSMZEG00005008476	atxn2	60	81.571	ENSPNYG00000016981	atxn2	98	80.193	Pundamilia_nyererei
ENSMZEG00005008476	atxn2	100	74.578	ENSPNAG00000010889	atxn2	99	72.693	Pygocentrus_nattereri
ENSMZEG00005008476	atxn2	97	69.903	ENSRNOG00000001256	Atxn2	94	69.524	Rattus_norvegicus
ENSMZEG00005008476	atxn2	97	70.455	ENSSHAG00000007304	ATXN2	95	70.064	Sarcophilus_harrisii
ENSMZEG00005008476	atxn2	87	81.071	ENSSFOG00015017229	atxn2	99	57.261	Scleropages_formosus
ENSMZEG00005008476	atxn2	99	88.942	ENSSMAG00000004627	atxn2	99	89.038	Scophthalmus_maximus
ENSMZEG00005008476	atxn2	100	89.963	ENSSDUG00000001223	atxn2	97	91.388	Seriola_dumerili
ENSMZEG00005008476	atxn2	69	67.901	ENSSARG00000006291	ATXN2	60	67.901	Sorex_araneus
ENSMZEG00005008476	atxn2	99	91.889	ENSSPAG00000000377	atxn2	98	92.440	Stegastes_partitus
ENSMZEG00005008476	atxn2	96	71.242	ENSSSCG00000009834	ATXN2	93	59.241	Sus_scrofa
ENSMZEG00005008476	atxn2	96	58.178	ENSTGUG00000006497	ATXN2	99	58.514	Taeniopygia_guttata
ENSMZEG00005008476	atxn2	99	87.427	ENSTRUG00000016801	atxn2	99	83.936	Takifugu_rubripes
ENSMZEG00005008476	atxn2	83	69.231	ENSTBEG00000001985	ATXN2	80	69.231	Tupaia_belangeri
ENSMZEG00005008476	atxn2	84	68.136	ENSTTRG00000000952	ATXN2	71	67.846	Tursiops_truncatus
ENSMZEG00005008476	atxn2	95	70.934	ENSVVUG00000016107	ATXN2	100	48.867	Vulpes_vulpes
ENSMZEG00005008476	atxn2	95	68.771	ENSXETG00000020912	atxn2	99	46.056	Xenopus_tropicalis
ENSMZEG00005008476	atxn2	59	78.837	ENSXCOG00000010001	atxn2	98	78.254	Xiphophorus_couchianus
ENSMZEG00005008476	atxn2	97	85.561	ENSXMAG00000003481	atxn2	99	84.880	Xiphophorus_maculatus