EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005008649 (Gene tree)
Gene ID: 101476382
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 48750 bases
Position: chrLG5:6703629-6752378
Accession: 101476382
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005011536	SHQ1	PF04925.15	4.9e-67	1	1
ENSMZEP00005011516	SHQ1	PF04925.15	7.3e-61	1	2
ENSMZEP00005011516	SHQ1	PF04925.15	7.3e-61	2	2
ENSMZEP00005011545	SHQ1	PF04925.15	7.3e-61	1	2
ENSMZEP00005011545	SHQ1	PF04925.15	7.3e-61	2	2
ENSMZEP00005011565	SHQ1	PF04925.15	7.3e-61	1	2
ENSMZEP00005011565	SHQ1	PF04925.15	7.3e-61	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005011937	-	3371	XM_012923599	ENSMZEP00005011536	601 (aa)	XP_012779053	UPI000D3222F7
ENSMZET00005011966	-	2795	XM_004567408	ENSMZEP00005011565	630 (aa)	XP_004567465	UPI000D31F4DF
ENSMZET00005011916	-	3458	XM_012923595	ENSMZEP00005011516	630 (aa)	XP_012779049	UPI000D31F4DF
ENSMZET00005011946	-	2936	XM_012923594	ENSMZEP00005011545	630 (aa)	XP_012779048	UPI000D31F4DF

Gene Model

Click here to download ENSMZEG00005008649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005008649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005008649	shq1	68	61.391	ENSG00000144736	SHQ1	96	68.750	Homo_sapiens
ENSMZEG00005008649	shq1	100	77.741	ENSAPOG00000000397	shq1	100	77.414	Acanthochromis_polyacanthus
ENSMZEG00005008649	shq1	74	57.768	ENSAMEG00000015140	SHQ1	76	59.725	Ailuropoda_melanoleuca
ENSMZEG00005008649	shq1	100	84.768	ENSACIG00000021249	shq1	100	84.437	Amphilophus_citrinellus
ENSMZEG00005008649	shq1	100	78.176	ENSAOCG00000023311	shq1	100	77.850	Amphiprion_ocellaris
ENSMZEG00005008649	shq1	100	78.197	ENSAPEG00000021686	shq1	100	77.869	Amphiprion_percula
ENSMZEG00005008649	shq1	99	73.675	ENSATEG00000008475	shq1	99	73.841	Anabas_testudineus
ENSMZEG00005008649	shq1	73	57.111	ENSAPLG00000013926	SHQ1	87	57.684	Anas_platyrhynchos
ENSMZEG00005008649	shq1	70	61.485	ENSACAG00000014809	SHQ1	66	61.211	Anolis_carolinensis
ENSMZEG00005008649	shq1	78	41.578	ENSANAG00000030500	-	74	43.448	Aotus_nancymaae
ENSMZEG00005008649	shq1	79	57.557	ENSANAG00000029241	SHQ1	76	60.090	Aotus_nancymaae
ENSMZEG00005008649	shq1	100	99.842	ENSACLG00000023077	shq1	100	99.842	Astatotilapia_calliptera
ENSMZEG00005008649	shq1	71	64.169	ENSAMXG00000043822	shq1	98	54.801	Astyanax_mexicanus
ENSMZEG00005008649	shq1	94	52.911	ENSBTAG00000005436	SHQ1	76	60.179	Bos_taurus
ENSMZEG00005008649	shq1	68	60.911	ENSCJAG00000015131	SHQ1	76	60.090	Callithrix_jacchus
ENSMZEG00005008649	shq1	65	60.150	ENSCAFG00000006434	SHQ1	76	59.865	Canis_familiaris
ENSMZEG00005008649	shq1	65	60.401	ENSCAFG00020016743	SHQ1	76	60.090	Canis_lupus_dingo
ENSMZEG00005008649	shq1	94	52.487	ENSCHIG00000012271	SHQ1	69	60.811	Capra_hircus
ENSMZEG00005008649	shq1	68	57.627	ENSTSYG00000014439	SHQ1	77	56.885	Carlito_syrichta
ENSMZEG00005008649	shq1	86	46.679	ENSCAPG00000009343	SHQ1	71	54.856	Cavia_aperea
ENSMZEG00005008649	shq1	94	50.680	ENSCPOG00000011443	SHQ1	99	50.594	Cavia_porcellus
ENSMZEG00005008649	shq1	78	43.404	ENSCCAG00000036087	-	74	44.804	Cebus_capucinus
ENSMZEG00005008649	shq1	68	52.644	ENSCCAG00000027080	SHQ1	75	51.345	Cebus_capucinus
ENSMZEG00005008649	shq1	68	62.110	ENSCATG00000041238	SHQ1	76	61.211	Cercocebus_atys
ENSMZEG00005008649	shq1	73	59.326	ENSCLAG00000004206	SHQ1	75	60.046	Chinchilla_lanigera
ENSMZEG00005008649	shq1	53	60.061	ENSCSAG00000011514	SHQ1	72	59.104	Chlorocebus_sabaeus
ENSMZEG00005008649	shq1	72	58.409	ENSCPBG00000006441	SHQ1	71	59.729	Chrysemys_picta_bellii
ENSMZEG00005008649	shq1	65	42.278	ENSCING00000008013	-	97	40.498	Ciona_intestinalis
ENSMZEG00005008649	shq1	65	40.051	ENSCSAVG00000002332	-	99	39.540	Ciona_savignyi
ENSMZEG00005008649	shq1	79	56.478	ENSCANG00000039295	SHQ1	77	60.762	Colobus_angolensis_palliatus
ENSMZEG00005008649	shq1	73	58.969	ENSCGRG00001012583	Shq1	78	58.202	Cricetulus_griseus_chok1gshd
ENSMZEG00005008649	shq1	73	58.969	ENSCGRG00000009849	Shq1	78	58.202	Cricetulus_griseus_crigri
ENSMZEG00005008649	shq1	98	69.787	ENSCSEG00000007829	shq1	98	69.787	Cynoglossus_semilaevis
ENSMZEG00005008649	shq1	99	70.805	ENSCVAG00000020049	shq1	99	71.309	Cyprinodon_variegatus
ENSMZEG00005008649	shq1	98	53.105	ENSDARG00000058522	shq1	98	52.827	Danio_rerio
ENSMZEG00005008649	shq1	92	52.105	ENSDNOG00000033937	SHQ1	75	60.731	Dasypus_novemcinctus
ENSMZEG00005008649	shq1	68	54.197	ENSETEG00000005766	SHQ1	76	53.196	Echinops_telfairi
ENSMZEG00005008649	shq1	61	47.861	ENSEBUG00000005445	shq1	79	48.580	Eptatretus_burgeri
ENSMZEG00005008649	shq1	73	60.356	ENSEASG00005002237	SHQ1	76	60.674	Equus_asinus_asinus
ENSMZEG00005008649	shq1	73	60.356	ENSECAG00000015673	SHQ1	75	60.674	Equus_caballus
ENSMZEG00005008649	shq1	72	60.948	ENSEEUG00000010568	SHQ1	76	61.036	Erinaceus_europaeus
ENSMZEG00005008649	shq1	98	61.279	ENSELUG00000003476	shq1	99	61.349	Esox_lucius
ENSMZEG00005008649	shq1	80	56.883	ENSFCAG00000012781	SHQ1	77	60.360	Felis_catus
ENSMZEG00005008649	shq1	68	62.619	ENSFALG00000013428	SHQ1	72	62.500	Ficedula_albicollis
ENSMZEG00005008649	shq1	68	59.712	ENSFDAG00000005595	SHQ1	67	59.361	Fukomys_damarensis
ENSMZEG00005008649	shq1	98	70.370	ENSFHEG00000017552	shq1	100	70.202	Fundulus_heteroclitus
ENSMZEG00005008649	shq1	65	76.093	ENSGMOG00000007350	shq1	100	75.578	Gadus_morhua
ENSMZEG00005008649	shq1	73	59.284	ENSGALG00000007798	SHQ1	71	60.046	Gallus_gallus
ENSMZEG00005008649	shq1	65	80.720	ENSGACG00000011797	shq1	100	80.463	Gasterosteus_aculeatus
ENSMZEG00005008649	shq1	68	61.391	ENSGGOG00000034818	SHQ1	76	60.538	Gorilla_gorilla
ENSMZEG00005008649	shq1	100	99.168	ENSHBUG00000010857	shq1	100	99.168	Haplochromis_burtoni
ENSMZEG00005008649	shq1	92	48.714	ENSHGLG00000003637	SHQ1	68	59.589	Heterocephalus_glaber_female
ENSMZEG00005008649	shq1	92	48.881	ENSHGLG00100011957	SHQ1	68	59.589	Heterocephalus_glaber_male
ENSMZEG00005008649	shq1	99	63.987	ENSHCOG00000010799	shq1	99	63.591	Hippocampus_comes
ENSMZEG00005008649	shq1	73	66.667	ENSIPUG00000001247	shq1	92	56.162	Ictalurus_punctatus
ENSMZEG00005008649	shq1	68	59.189	ENSSTOG00000010043	SHQ1	81	57.399	Ictidomys_tridecemlineatus
ENSMZEG00005008649	shq1	68	60.577	ENSJJAG00000017611	Shq1	76	60.183	Jaculus_jaculus
ENSMZEG00005008649	shq1	100	71.854	ENSKMAG00000004457	shq1	100	71.689	Kryptolebias_marmoratus
ENSMZEG00005008649	shq1	72	63.039	ENSLACG00000014243	SHQ1	66	63.039	Latimeria_chalumnae
ENSMZEG00005008649	shq1	99	55.906	ENSLOCG00000009970	shq1	99	55.906	Lepisosteus_oculatus
ENSMZEG00005008649	shq1	68	61.871	ENSMFAG00000039148	SHQ1	76	60.987	Macaca_fascicularis
ENSMZEG00005008649	shq1	68	43.269	ENSMFAG00000037396	-	74	42.825	Macaca_fascicularis
ENSMZEG00005008649	shq1	60	60.976	ENSMMUG00000009571	SHQ1	71	60.050	Macaca_mulatta
ENSMZEG00005008649	shq1	68	43.198	ENSMMUG00000021761	-	74	42.825	Macaca_mulatta
ENSMZEG00005008649	shq1	68	61.871	ENSMNEG00000032667	SHQ1	76	60.987	Macaca_nemestrina
ENSMZEG00005008649	shq1	68	61.871	ENSMLEG00000038493	SHQ1	76	60.987	Mandrillus_leucophaeus
ENSMZEG00005008649	shq1	99	75.980	ENSMAMG00000023432	shq1	95	75.490	Mastacembelus_armatus
ENSMZEG00005008649	shq1	73	59.152	ENSMGAG00000009640	SHQ1	72	60.183	Meleagris_gallopavo
ENSMZEG00005008649	shq1	73	59.193	ENSMAUG00000022030	Shq1	78	58.427	Mesocricetus_auratus
ENSMZEG00005008649	shq1	88	48.803	ENSMICG00000009224	SHQ1	76	59.641	Microcebus_murinus
ENSMZEG00005008649	shq1	78	58.004	ENSMOCG00000017836	Shq1	78	58.520	Microtus_ochrogaster
ENSMZEG00005008649	shq1	98	69.783	ENSMMOG00000010569	shq1	99	69.449	Mola_mola
ENSMZEG00005008649	shq1	78	55.918	ENSMODG00000003926	SHQ1	78	59.132	Monodelphis_domestica
ENSMZEG00005008649	shq1	99	74.252	ENSMALG00000008870	shq1	99	73.920	Monopterus_albus
ENSMZEG00005008649	shq1	78	56.667	MGP_CAROLIEiJ_G0028689	Shq1	78	57.978	Mus_caroli
ENSMZEG00005008649	shq1	78	56.458	ENSMUSG00000035378	Shq1	78	57.978	Mus_musculus
ENSMZEG00005008649	shq1	74	57.930	MGP_PahariEiJ_G0022440	Shq1	78	58.296	Mus_pahari
ENSMZEG00005008649	shq1	78	56.667	MGP_SPRETEiJ_G0029717	Shq1	78	58.202	Mus_spretus
ENSMZEG00005008649	shq1	92	51.675	ENSMPUG00000017006	SHQ1	75	59.551	Mustela_putorius_furo
ENSMZEG00005008649	shq1	66	58.272	ENSMLUG00000013539	SHQ1	74	59.231	Myotis_lucifugus
ENSMZEG00005008649	shq1	78	49.156	ENSNGAG00000023317	Shq1	77	52.273	Nannospalax_galili
ENSMZEG00005008649	shq1	85	98.438	ENSNBRG00000024004	shq1	100	98.438	Neolamprologus_brichardi
ENSMZEG00005008649	shq1	79	57.085	ENSNLEG00000002731	SHQ1	76	60.762	Nomascus_leucogenys
ENSMZEG00005008649	shq1	69	54.630	ENSMEUG00000009350	-	70	54.630	Notamacropus_eugenii
ENSMZEG00005008649	shq1	74	58.901	ENSODEG00000009192	SHQ1	81	59.865	Octodon_degus
ENSMZEG00005008649	shq1	99	97.504	ENSONIG00000020264	shq1	100	97.504	Oreochromis_niloticus
ENSMZEG00005008649	shq1	95	51.864	ENSOCUG00000016695	SHQ1	76	60.762	Oryctolagus_cuniculus
ENSMZEG00005008649	shq1	99	65.268	ENSORLG00000023538	shq1	99	64.597	Oryzias_latipes
ENSMZEG00005008649	shq1	99	65.993	ENSORLG00020003697	shq1	99	65.320	Oryzias_latipes_hni
ENSMZEG00005008649	shq1	99	64.765	ENSORLG00015021040	shq1	99	64.262	Oryzias_latipes_hsok
ENSMZEG00005008649	shq1	95	68.118	ENSOMEG00000001225	shq1	97	67.596	Oryzias_melastigma
ENSMZEG00005008649	shq1	78	56.965	ENSOGAG00000003898	SHQ1	78	59.688	Otolemur_garnettii
ENSMZEG00005008649	shq1	68	60.859	ENSOARG00000009547	SHQ1	76	60.090	Ovis_aries
ENSMZEG00005008649	shq1	68	61.631	ENSPPAG00000027714	SHQ1	76	60.762	Pan_paniscus
ENSMZEG00005008649	shq1	79	41.615	ENSPPAG00000043263	-	73	42.989	Pan_paniscus
ENSMZEG00005008649	shq1	94	50.761	ENSPPRG00000004769	SHQ1	76	60.360	Panthera_pardus
ENSMZEG00005008649	shq1	94	48.635	ENSPTIG00000011478	SHQ1	75	57.078	Panthera_tigris_altaica
ENSMZEG00005008649	shq1	68	61.631	ENSPTRG00000015106	SHQ1	76	60.762	Pan_troglodytes
ENSMZEG00005008649	shq1	79	40.664	ENSPTRG00000048303	-	73	41.935	Pan_troglodytes
ENSMZEG00005008649	shq1	68	61.058	ENSPANG00000002881	SHQ1	76	61.211	Papio_anubis
ENSMZEG00005008649	shq1	99	56.073	ENSPKIG00000021517	shq1	75	67.898	Paramormyrops_kingsleyae
ENSMZEG00005008649	shq1	72	59.091	ENSPSIG00000005536	SHQ1	72	59.729	Pelodiscus_sinensis
ENSMZEG00005008649	shq1	99	60.570	ENSPMGG00000008838	shq1	100	59.370	Periophthalmus_magnuspinnatus
ENSMZEG00005008649	shq1	65	60.750	ENSPEMG00000000251	Shq1	76	58.581	Peromyscus_maniculatus_bairdii
ENSMZEG00005008649	shq1	72	58.503	ENSPMAG00000005372	shq1	99	57.370	Petromyzon_marinus
ENSMZEG00005008649	shq1	92	68.051	ENSPFOG00000003118	shq1	99	68.829	Poecilia_formosa
ENSMZEG00005008649	shq1	77	66.955	ENSPMEG00000011076	shq1	98	67.407	Poecilia_mexicana
ENSMZEG00005008649	shq1	83	67.265	ENSPREG00000000591	shq1	92	67.530	Poecilia_reticulata
ENSMZEG00005008649	shq1	79	56.907	ENSPPYG00000013717	SHQ1	76	60.538	Pongo_abelii
ENSMZEG00005008649	shq1	68	61.190	ENSPCAG00000009035	SHQ1	77	60.538	Procavia_capensis
ENSMZEG00005008649	shq1	68	61.631	ENSPCOG00000008415	SHQ1	76	60.762	Propithecus_coquereli
ENSMZEG00005008649	shq1	76	57.940	ENSPVAG00000017392	SHQ1	77	60.225	Pteropus_vampyrus
ENSMZEG00005008649	shq1	100	98.837	ENSPNYG00000003878	shq1	100	98.837	Pundamilia_nyererei
ENSMZEG00005008649	shq1	98	57.002	ENSPNAG00000026840	shq1	99	57.003	Pygocentrus_nattereri
ENSMZEG00005008649	shq1	73	59.375	ENSRNOG00000005433	Shq1	73	58.652	Rattus_norvegicus
ENSMZEG00005008649	shq1	81	53.707	ENSRBIG00000026280	SHQ1	76	59.226	Rhinopithecus_bieti
ENSMZEG00005008649	shq1	81	55.731	ENSRROG00000034126	SHQ1	77	61.435	Rhinopithecus_roxellana
ENSMZEG00005008649	shq1	68	54.567	ENSSBOG00000021038	SHQ1	74	53.933	Saimiri_boliviensis_boliviensis
ENSMZEG00005008649	shq1	71	60.274	ENSSHAG00000015077	SHQ1	77	60.045	Sarcophilus_harrisii
ENSMZEG00005008649	shq1	99	59.496	ENSSFOG00015016241	shq1	99	59.664	Scleropages_formosus
ENSMZEG00005008649	shq1	99	74.295	ENSSMAG00000016151	shq1	99	73.798	Scophthalmus_maximus
ENSMZEG00005008649	shq1	99	75.578	ENSSDUG00000011986	shq1	99	75.908	Seriola_dumerili
ENSMZEG00005008649	shq1	99	74.711	ENSSLDG00000013908	shq1	99	74.876	Seriola_lalandi_dorsalis
ENSMZEG00005008649	shq1	56	58.309	ENSSARG00000007119	SHQ1	77	50.452	Sorex_araneus
ENSMZEG00005008649	shq1	85	47.866	ENSSPUG00000011526	-	65	59.259	Sphenodon_punctatus
ENSMZEG00005008649	shq1	80	57.347	ENSSSCG00000011518	SHQ1	76	60.407	Sus_scrofa
ENSMZEG00005008649	shq1	68	62.619	ENSTGUG00000009933	SHQ1	76	61.883	Taeniopygia_guttata
ENSMZEG00005008649	shq1	98	65.767	ENSTRUG00000009446	shq1	99	66.442	Takifugu_rubripes
ENSMZEG00005008649	shq1	77	69.658	ENSTNIG00000007354	shq1	96	72.936	Tetraodon_nigroviridis
ENSMZEG00005008649	shq1	72	59.594	ENSTTRG00000005320	SHQ1	76	59.685	Tursiops_truncatus
ENSMZEG00005008649	shq1	93	50.607	ENSUMAG00000024031	SHQ1	76	59.174	Ursus_maritimus
ENSMZEG00005008649	shq1	69	50.115	ENSVPAG00000004880	SHQ1	59	60.635	Vicugna_pacos
ENSMZEG00005008649	shq1	65	60.150	ENSVVUG00000013906	SHQ1	76	59.641	Vulpes_vulpes
ENSMZEG00005008649	shq1	99	49.029	ENSXETG00000032215	shq1	99	49.109	Xenopus_tropicalis