EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005008949 (Gene tree)
Gene ID: 101470843
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 17410 bases
Position: chrLG6:30158337-30175746
Accession: 101470843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005011936	Suf	PF05843.14	1.5e-09	1	1
ENSMZEP00005011936	S1	PF00575.23	2.8e-63	1	4
ENSMZEP00005011936	S1	PF00575.23	2.8e-63	2	4
ENSMZEP00005011936	S1	PF00575.23	2.8e-63	3	4
ENSMZEP00005011936	S1	PF00575.23	2.8e-63	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005012345	-	8833	XM_004538953	ENSMZEP00005011936	1806 (aa)	XP_004539010	UPI000C238854

Gene Model

Click here to download ENSMZEG00005008949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005008949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005008949	pdcd11	99	44.468	ENSG00000148843	PDCD11	95	60.212	Homo_sapiens
ENSMZEG00005008949	pdcd11	99	79.901	ENSAPOG00000015629	pdcd11	99	79.824	Acanthochromis_polyacanthus
ENSMZEG00005008949	pdcd11	99	44.362	ENSAMEG00000017935	PDCD11	95	61.257	Ailuropoda_melanoleuca
ENSMZEG00005008949	pdcd11	51	76.356	ENSACIG00000006458	-	99	76.356	Amphilophus_citrinellus
ENSMZEG00005008949	pdcd11	99	80.485	ENSAOCG00000015287	pdcd11	99	79.989	Amphiprion_ocellaris
ENSMZEG00005008949	pdcd11	56	76.931	ENSAPEG00000020240	pdcd11	99	76.931	Amphiprion_percula
ENSMZEG00005008949	pdcd11	100	80.022	ENSATEG00000021043	pdcd11	100	80.022	Anabas_testudineus
ENSMZEG00005008949	pdcd11	99	45.161	ENSACAG00000004796	PDCD11	99	45.271	Anolis_carolinensis
ENSMZEG00005008949	pdcd11	99	43.928	ENSANAG00000034576	PDCD11	76	41.300	Aotus_nancymaae
ENSMZEG00005008949	pdcd11	97	92.613	ENSACLG00000018236	pdcd11	100	93.750	Astatotilapia_calliptera
ENSMZEG00005008949	pdcd11	99	50.287	ENSAMXG00000005458	pdcd11	97	53.165	Astyanax_mexicanus
ENSMZEG00005008949	pdcd11	99	44.462	ENSBTAG00000009715	PDCD11	96	60.950	Bos_taurus
ENSMZEG00005008949	pdcd11	99	43.717	ENSCJAG00000018257	PDCD11	76	41.370	Callithrix_jacchus
ENSMZEG00005008949	pdcd11	99	44.155	ENSCAFG00000010411	PDCD11	95	61.111	Canis_familiaris
ENSMZEG00005008949	pdcd11	99	44.690	ENSCAFG00020010369	PDCD11	95	61.111	Canis_lupus_dingo
ENSMZEG00005008949	pdcd11	99	44.262	ENSCHIG00000025218	PDCD11	95	60.963	Capra_hircus
ENSMZEG00005008949	pdcd11	95	43.729	ENSTSYG00000033423	PDCD11	99	43.288	Carlito_syrichta
ENSMZEG00005008949	pdcd11	89	40.531	ENSCAPG00000005386	PDCD11	98	40.182	Cavia_aperea
ENSMZEG00005008949	pdcd11	99	43.422	ENSCPOG00000010957	PDCD11	99	42.889	Cavia_porcellus
ENSMZEG00005008949	pdcd11	99	43.611	ENSCCAG00000018950	PDCD11	76	41.160	Cebus_capucinus
ENSMZEG00005008949	pdcd11	99	44.339	ENSCATG00000044331	PDCD11	96	59.840	Cercocebus_atys
ENSMZEG00005008949	pdcd11	99	43.720	ENSCLAG00000001029	PDCD11	99	43.469	Chinchilla_lanigera
ENSMZEG00005008949	pdcd11	99	44.333	ENSCSAG00000005346	PDCD11	96	59.840	Chlorocebus_sabaeus
ENSMZEG00005008949	pdcd11	71	68.992	ENSCHOG00000004796	PDCD11	75	68.992	Choloepus_hoffmanni
ENSMZEG00005008949	pdcd11	92	60.623	ENSCPBG00000024487	PDCD11	99	61.207	Chrysemys_picta_bellii
ENSMZEG00005008949	pdcd11	99	44.121	ENSCANG00000043300	PDCD11	96	60.160	Colobus_angolensis_palliatus
ENSMZEG00005008949	pdcd11	99	44.077	ENSCGRG00001006458	Pdcd11	99	43.673	Cricetulus_griseus_chok1gshd
ENSMZEG00005008949	pdcd11	99	43.947	ENSCGRG00000003583	Pdcd11	99	43.543	Cricetulus_griseus_crigri
ENSMZEG00005008949	pdcd11	97	72.392	ENSCSEG00000010739	pdcd11	99	72.392	Cynoglossus_semilaevis
ENSMZEG00005008949	pdcd11	95	75.285	ENSCVAG00000018903	pdcd11	99	74.797	Cyprinodon_variegatus
ENSMZEG00005008949	pdcd11	99	44.256	ENSDNOG00000013838	PDCD11	94	62.108	Dasypus_novemcinctus
ENSMZEG00005008949	pdcd11	99	43.989	ENSDORG00000010420	Pdcd11	99	44.391	Dipodomys_ordii
ENSMZEG00005008949	pdcd11	54	31.476	FBgn0039182	CG5728	73	32.295	Drosophila_melanogaster
ENSMZEG00005008949	pdcd11	90	52.941	ENSETEG00000000813	PDCD11	97	46.226	Echinops_telfairi
ENSMZEG00005008949	pdcd11	72	49.175	ENSEBUG00000002358	-	87	51.812	Eptatretus_burgeri
ENSMZEG00005008949	pdcd11	95	44.828	ENSEASG00005015159	PDCD11	74	41.952	Equus_asinus_asinus
ENSMZEG00005008949	pdcd11	99	44.509	ENSECAG00000020507	PDCD11	75	41.498	Equus_caballus
ENSMZEG00005008949	pdcd11	89	44.565	ENSEEUG00000009245	PDCD11	65	44.565	Erinaceus_europaeus
ENSMZEG00005008949	pdcd11	99	60.384	ENSELUG00000004211	pdcd11	99	60.318	Esox_lucius
ENSMZEG00005008949	pdcd11	99	44.345	ENSFCAG00000002384	PDCD11	95	61.111	Felis_catus
ENSMZEG00005008949	pdcd11	99	44.957	ENSFALG00000008775	PDCD11	99	44.818	Ficedula_albicollis
ENSMZEG00005008949	pdcd11	90	89.701	ENSFHEG00000022997	pdcd11	95	89.701	Fundulus_heteroclitus
ENSMZEG00005008949	pdcd11	93	63.071	ENSGMOG00000004186	pdcd11	94	63.071	Gadus_morhua
ENSMZEG00005008949	pdcd11	77	42.547	ENSGALG00000008265	PDCD11	97	42.547	Gallus_gallus
ENSMZEG00005008949	pdcd11	96	74.672	ENSGAFG00000012806	pdcd11	99	73.458	Gambusia_affinis
ENSMZEG00005008949	pdcd11	99	72.703	ENSGACG00000018233	pdcd11	97	83.770	Gasterosteus_aculeatus
ENSMZEG00005008949	pdcd11	95	47.022	ENSGAGG00000024314	PDCD11	99	46.481	Gopherus_agassizii
ENSMZEG00005008949	pdcd11	99	44.544	ENSGGOG00000011621	PDCD11	96	59.840	Gorilla_gorilla
ENSMZEG00005008949	pdcd11	100	99.391	ENSHBUG00000020226	pdcd11	100	99.391	Haplochromis_burtoni
ENSMZEG00005008949	pdcd11	99	70.413	ENSHCOG00000016006	pdcd11	99	70.319	Hippocampus_comes
ENSMZEG00005008949	pdcd11	63	53.415	ENSIPUG00000015102	pdcd11	99	55.303	Ictalurus_punctatus
ENSMZEG00005008949	pdcd11	99	43.817	ENSSTOG00000014553	PDCD11	99	44.105	Ictidomys_tridecemlineatus
ENSMZEG00005008949	pdcd11	99	45.187	ENSJJAG00000015523	Pdcd11	99	45.134	Jaculus_jaculus
ENSMZEG00005008949	pdcd11	50	70.665	ENSKMAG00000021182	pdcd11	98	70.665	Kryptolebias_marmoratus
ENSMZEG00005008949	pdcd11	99	55.647	ENSLOCG00000011818	pdcd11	99	55.537	Lepisosteus_oculatus
ENSMZEG00005008949	pdcd11	99	44.748	ENSLAFG00000008398	PDCD11	99	44.594	Loxodonta_africana
ENSMZEG00005008949	pdcd11	99	44.068	ENSMFAG00000044058	PDCD11	96	59.840	Macaca_fascicularis
ENSMZEG00005008949	pdcd11	99	44.015	ENSMMUG00000007058	PDCD11	96	59.840	Macaca_mulatta
ENSMZEG00005008949	pdcd11	99	44.174	ENSMNEG00000040726	PDCD11	96	59.574	Macaca_nemestrina
ENSMZEG00005008949	pdcd11	99	79.162	ENSMAMG00000009572	pdcd11	99	79.107	Mastacembelus_armatus
ENSMZEG00005008949	pdcd11	99	44.427	ENSMGAG00000010482	PDCD11	96	58.839	Meleagris_gallopavo
ENSMZEG00005008949	pdcd11	91	47.003	ENSMAUG00000014924	Pdcd11	94	60.000	Mesocricetus_auratus
ENSMZEG00005008949	pdcd11	99	44.521	ENSMICG00000012421	PDCD11	76	41.859	Microcebus_murinus
ENSMZEG00005008949	pdcd11	99	44.141	ENSMOCG00000021792	Pdcd11	95	60.106	Microtus_ochrogaster
ENSMZEG00005008949	pdcd11	99	62.800	ENSMMOG00000007572	pdcd11	97	70.549	Mola_mola
ENSMZEG00005008949	pdcd11	93	50.607	ENSMODG00000011077	PDCD11	90	61.067	Monodelphis_domestica
ENSMZEG00005008949	pdcd11	99	64.975	ENSMALG00000003859	pdcd11	99	73.102	Monopterus_albus
ENSMZEG00005008949	pdcd11	99	43.944	MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.518	Mus_caroli
ENSMZEG00005008949	pdcd11	99	43.603	ENSMUSG00000025047	Pdcd11	99	43.757	Mus_musculus
ENSMZEG00005008949	pdcd11	99	43.910	MGP_SPRETEiJ_G0023971	Pdcd11	99	44.017	Mus_spretus
ENSMZEG00005008949	pdcd11	99	44.480	ENSMPUG00000016829	PDCD11	95	61.968	Mustela_putorius_furo
ENSMZEG00005008949	pdcd11	99	44.074	ENSMLUG00000004997	PDCD11	96	60.582	Myotis_lucifugus
ENSMZEG00005008949	pdcd11	99	43.826	ENSNGAG00000018143	Pdcd11	99	43.258	Nannospalax_galili
ENSMZEG00005008949	pdcd11	85	96.166	ENSNBRG00000021596	pdcd11	99	89.415	Neolamprologus_brichardi
ENSMZEG00005008949	pdcd11	99	42.660	ENSNLEG00000026700	PDCD11	95	59.309	Nomascus_leucogenys
ENSMZEG00005008949	pdcd11	70	67.111	ENSMEUG00000013719	-	61	67.111	Notamacropus_eugenii
ENSMZEG00005008949	pdcd11	99	44.789	ENSOPRG00000010593	PDCD11	93	60.000	Ochotona_princeps
ENSMZEG00005008949	pdcd11	99	43.640	ENSODEG00000008079	PDCD11	99	43.291	Octodon_degus
ENSMZEG00005008949	pdcd11	100	97.010	ENSONIG00000018835	pdcd11	100	97.010	Oreochromis_niloticus
ENSMZEG00005008949	pdcd11	99	43.072	ENSOANG00000001636	-	99	42.996	Ornithorhynchus_anatinus
ENSMZEG00005008949	pdcd11	99	44.127	ENSOCUG00000006312	PDCD11	99	43.810	Oryctolagus_cuniculus
ENSMZEG00005008949	pdcd11	99	74.339	ENSORLG00020003642	pdcd11	99	74.229	Oryzias_latipes_hni
ENSMZEG00005008949	pdcd11	99	74.656	ENSORLG00015001618	pdcd11	99	74.215	Oryzias_latipes_hsok
ENSMZEG00005008949	pdcd11	73	74.703	ENSOMEG00000010904	pdcd11	98	74.257	Oryzias_melastigma
ENSMZEG00005008949	pdcd11	99	44.110	ENSOARG00000003719	PDCD11	95	60.477	Ovis_aries
ENSMZEG00005008949	pdcd11	99	44.015	ENSPPAG00000024593	PDCD11	95	60.106	Pan_paniscus
ENSMZEG00005008949	pdcd11	99	44.609	ENSPPRG00000015133	PDCD11	95	61.111	Panthera_pardus
ENSMZEG00005008949	pdcd11	99	44.503	ENSPTIG00000011433	PDCD11	95	61.170	Panthera_tigris_altaica
ENSMZEG00005008949	pdcd11	99	44.544	ENSPTRG00000002911	PDCD11	95	60.106	Pan_troglodytes
ENSMZEG00005008949	pdcd11	99	44.386	ENSPANG00000020959	PDCD11	96	59.309	Papio_anubis
ENSMZEG00005008949	pdcd11	99	55.734	ENSPKIG00000000973	pdcd11	99	55.647	Paramormyrops_kingsleyae
ENSMZEG00005008949	pdcd11	78	43.520	ENSPSIG00000005102	PDCD11	93	44.028	Pelodiscus_sinensis
ENSMZEG00005008949	pdcd11	67	83.175	ENSPMGG00000007289	pdcd11	98	81.734	Periophthalmus_magnuspinnatus
ENSMZEG00005008949	pdcd11	99	43.862	ENSPEMG00000010315	Pdcd11	96	60.000	Peromyscus_maniculatus_bairdii
ENSMZEG00005008949	pdcd11	99	43.083	ENSPCIG00000001118	PDCD11	95	59.249	Phascolarctos_cinereus
ENSMZEG00005008949	pdcd11	99	72.903	ENSPFOG00000006012	pdcd11	99	72.893	Poecilia_formosa
ENSMZEG00005008949	pdcd11	97	75.349	ENSPLAG00000014494	pdcd11	99	75.000	Poecilia_latipinna
ENSMZEG00005008949	pdcd11	90	66.606	ENSPMEG00000018177	pdcd11	98	68.266	Poecilia_mexicana
ENSMZEG00005008949	pdcd11	99	72.372	ENSPREG00000000475	pdcd11	99	72.418	Poecilia_reticulata
ENSMZEG00005008949	pdcd11	99	38.708	ENSPPYG00000002621	PDCD11	95	59.309	Pongo_abelii
ENSMZEG00005008949	pdcd11	99	40.396	ENSPCOG00000023327	PDCD11	94	61.960	Propithecus_coquereli
ENSMZEG00005008949	pdcd11	99	43.584	ENSPVAG00000004176	PDCD11	75	40.769	Pteropus_vampyrus
ENSMZEG00005008949	pdcd11	100	99.225	ENSPNYG00000003979	pdcd11	100	99.225	Pundamilia_nyererei
ENSMZEG00005008949	pdcd11	95	56.831	ENSPNAG00000017225	pdcd11	99	56.889	Pygocentrus_nattereri
ENSMZEG00005008949	pdcd11	99	43.395	ENSRNOG00000020304	Pdcd11	96	60.800	Rattus_norvegicus
ENSMZEG00005008949	pdcd11	99	44.174	ENSRBIG00000011889	PDCD11	96	59.893	Rhinopithecus_bieti
ENSMZEG00005008949	pdcd11	99	44.174	ENSRROG00000030483	PDCD11	96	60.160	Rhinopithecus_roxellana
ENSMZEG00005008949	pdcd11	95	34.503	YMR229C	-	95	43.114	Saccharomyces_cerevisiae
ENSMZEG00005008949	pdcd11	99	37.846	ENSSBOG00000030308	PDCD11	74	33.747	Saimiri_boliviensis_boliviensis
ENSMZEG00005008949	pdcd11	99	42.645	ENSSHAG00000018258	PDCD11	95	57.373	Sarcophilus_harrisii
ENSMZEG00005008949	pdcd11	99	56.298	ENSSFOG00015003881	pdcd11	99	56.060	Scleropages_formosus
ENSMZEG00005008949	pdcd11	99	78.029	ENSSMAG00000006612	pdcd11	99	78.146	Scophthalmus_maximus
ENSMZEG00005008949	pdcd11	97	71.811	ENSSDUG00000021302	pdcd11	99	74.046	Seriola_dumerili
ENSMZEG00005008949	pdcd11	50	78.108	ENSSLDG00000010228	pdcd11	99	78.658	Seriola_lalandi_dorsalis
ENSMZEG00005008949	pdcd11	76	67.347	ENSSARG00000002540	PDCD11	63	67.347	Sorex_araneus
ENSMZEG00005008949	pdcd11	97	79.160	ENSSPAG00000017558	pdcd11	100	79.136	Stegastes_partitus
ENSMZEG00005008949	pdcd11	99	44.662	ENSSSCG00000010599	PDCD11	99	44.889	Sus_scrofa
ENSMZEG00005008949	pdcd11	71	70.086	ENSTRUG00000014291	pdcd11	100	70.086	Takifugu_rubripes
ENSMZEG00005008949	pdcd11	100	70.134	ENSTNIG00000012085	pdcd11	100	70.188	Tetraodon_nigroviridis
ENSMZEG00005008949	pdcd11	97	61.272	ENSTBEG00000001893	PDCD11	94	61.272	Tupaia_belangeri
ENSMZEG00005008949	pdcd11	99	41.465	ENSTTRG00000003356	PDCD11	95	56.764	Tursiops_truncatus
ENSMZEG00005008949	pdcd11	99	44.355	ENSUAMG00000018015	PDCD11	95	61.478	Ursus_americanus
ENSMZEG00005008949	pdcd11	99	43.381	ENSUMAG00000023567	PDCD11	95	61.478	Ursus_maritimus
ENSMZEG00005008949	pdcd11	64	47.778	ENSVPAG00000007405	PDCD11	72	47.778	Vicugna_pacos
ENSMZEG00005008949	pdcd11	99	44.102	ENSVVUG00000004457	PDCD11	95	61.111	Vulpes_vulpes
ENSMZEG00005008949	pdcd11	99	44.279	ENSXETG00000009482	pdcd11	99	43.960	Xenopus_tropicalis
ENSMZEG00005008949	pdcd11	99	61.237	ENSXCOG00000012420	pdcd11	99	61.301	Xiphophorus_couchianus
ENSMZEG00005008949	pdcd11	99	73.344	ENSXMAG00000004638	pdcd11	99	73.554	Xiphophorus_maculatus