EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005008993 (Gene tree)
Gene ID: 101488115
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 22027 bases
Position: chrLG23:38435601-38457627
Accession: 101488115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023096	KH_1	PF00013.29	2.3e-48	1	3
ENSMZEP00005023096	KH_1	PF00013.29	2.3e-48	2	3
ENSMZEP00005023096	KH_1	PF00013.29	2.3e-48	3	3
ENSMZEP00005022875	KH_1	PF00013.29	3.7e-48	1	3
ENSMZEP00005022875	KH_1	PF00013.29	3.7e-48	2	3
ENSMZEP00005022875	KH_1	PF00013.29	3.7e-48	3	3
ENSMZEP00005023196	KH_1	PF00013.29	4.2e-48	1	3
ENSMZEP00005023196	KH_1	PF00013.29	4.2e-48	2	3
ENSMZEP00005023196	KH_1	PF00013.29	4.2e-48	3	3
ENSMZEP00005022904	KH_1	PF00013.29	2.7e-46	1	3
ENSMZEP00005022904	KH_1	PF00013.29	2.7e-46	2	3
ENSMZEP00005022904	KH_1	PF00013.29	2.7e-46	3	3
ENSMZEP00005023190	KH_1	PF00013.29	2.9e-46	1	3
ENSMZEP00005023190	KH_1	PF00013.29	2.9e-46	2	3
ENSMZEP00005023190	KH_1	PF00013.29	2.9e-46	3	3
ENSMZEP00005023203	KH_1	PF00013.29	3.8e-46	1	3
ENSMZEP00005023203	KH_1	PF00013.29	3.8e-46	2	3
ENSMZEP00005023203	KH_1	PF00013.29	3.8e-46	3	3
ENSMZEP00005022522	KH_1	PF00013.29	2.1e-29	1	2
ENSMZEP00005022522	KH_1	PF00013.29	2.1e-29	2	2
ENSMZEP00005023096	KH_2	PF07650.17	2.4e-10	1	1
ENSMZEP00005023190	KH_2	PF07650.17	4.1e-10	1	1
ENSMZEP00005022875	KH_2	PF07650.17	7.3e-10	1	1
ENSMZEP00005023196	KH_2	PF07650.17	1e-09	1	1
ENSMZEP00005022904	KH_2	PF07650.17	1.5e-09	1	1
ENSMZEP00005023203	KH_2	PF07650.17	3.2e-09	1	1
ENSMZEP00005022522	KH_2	PF07650.17	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005023964	-	1047	-	ENSMZEP00005023203	348 (aa)	-	-
ENSMZET00005023271	-	726	-	ENSMZEP00005022522	241 (aa)	-	-
ENSMZET00005023656	-	978	-	ENSMZEP00005022904	325 (aa)	-	-
ENSMZET00005023853	-	927	-	ENSMZEP00005023096	308 (aa)	-	-
ENSMZET00005023951	-	990	-	ENSMZEP00005023190	329 (aa)	-	-
ENSMZET00005023957	-	1053	XM_004575355	ENSMZEP00005023196	350 (aa)	XP_004575412	-
ENSMZET00005023627	-	1023	XM_023155473	ENSMZEP00005022875	340 (aa)	XP_023011241	-

Gene Model

Click here to download ENSMZEG00005008993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005008993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005008993	pcbp3	100	88.286	ENSAPOG00000016582	-	100	88.286	Acanthochromis_polyacanthus
ENSMZEG00005008993	pcbp3	98	89.521	ENSAPOG00000020003	pcbp3	86	90.390	Acanthochromis_polyacanthus
ENSMZEG00005008993	pcbp3	96	84.821	ENSAMEG00000001697	-	96	84.320	Ailuropoda_melanoleuca
ENSMZEG00005008993	pcbp3	98	88.922	ENSACIG00000002739	-	99	88.047	Amphilophus_citrinellus
ENSMZEG00005008993	pcbp3	100	98.000	ENSACIG00000010933	pcbp3	100	98.000	Amphilophus_citrinellus
ENSMZEG00005008993	pcbp3	86	85.809	ENSAOCG00000007806	-	99	84.127	Amphiprion_ocellaris
ENSMZEG00005008993	pcbp3	100	88.304	ENSAOCG00000008592	-	100	88.824	Amphiprion_ocellaris
ENSMZEG00005008993	pcbp3	98	87.725	ENSAPEG00000005209	-	99	86.880	Amphiprion_percula
ENSMZEG00005008993	pcbp3	100	96.307	ENSAPEG00000008011	pcbp3	100	96.307	Amphiprion_percula
ENSMZEG00005008993	pcbp3	98	96.407	ENSATEG00000015787	-	100	97.297	Anabas_testudineus
ENSMZEG00005008993	pcbp3	98	87.725	ENSATEG00000009833	-	99	86.880	Anabas_testudineus
ENSMZEG00005008993	pcbp3	98	75.749	ENSAPLG00000008951	-	82	75.749	Anas_platyrhynchos
ENSMZEG00005008993	pcbp3	96	83.186	ENSAPLG00000002975	-	95	83.186	Anas_platyrhynchos
ENSMZEG00005008993	pcbp3	96	88.406	ENSACAG00000004607	-	96	88.184	Anolis_carolinensis
ENSMZEG00005008993	pcbp3	96	84.049	ENSACAG00000009819	-	95	84.098	Anolis_carolinensis
ENSMZEG00005008993	pcbp3	94	70.896	ENSANAG00000030702	-	91	94.318	Aotus_nancymaae
ENSMZEG00005008993	pcbp3	100	87.714	ENSACLG00000003801	-	100	87.714	Astatotilapia_calliptera
ENSMZEG00005008993	pcbp3	100	97.159	ENSACLG00000011835	pcbp3	100	97.159	Astatotilapia_calliptera
ENSMZEG00005008993	pcbp3	100	94.286	ENSAMXG00000003440	pcbp3	100	94.286	Astyanax_mexicanus
ENSMZEG00005008993	pcbp3	96	65.043	ENSAMXG00000001760	zgc:110045	73	64.756	Astyanax_mexicanus
ENSMZEG00005008993	pcbp3	98	85.285	ENSAMXG00000013588	-	100	85.586	Astyanax_mexicanus
ENSMZEG00005008993	pcbp3	92	92.670	ENSCAFG00020019472	-	83	85.593	Canis_lupus_dingo
ENSMZEG00005008993	pcbp3	96	85.933	ENSCSAG00000007440	-	89	85.119	Chlorocebus_sabaeus
ENSMZEG00005008993	pcbp3	98	82.938	ENSCPBG00000000733	-	76	80.347	Chrysemys_picta_bellii
ENSMZEG00005008993	pcbp3	96	86.239	ENSCPBG00000012151	-	95	83.673	Chrysemys_picta_bellii
ENSMZEG00005008993	pcbp3	98	89.030	ENSCSEG00000000822	pcbp3	99	88.589	Cynoglossus_semilaevis
ENSMZEG00005008993	pcbp3	94	80.435	ENSCSEG00000016984	-	99	74.016	Cynoglossus_semilaevis
ENSMZEG00005008993	pcbp3	100	96.023	ENSCVAG00000014482	pcbp3	100	96.023	Cyprinodon_variegatus
ENSMZEG00005008993	pcbp3	100	87.714	ENSCVAG00000005262	-	100	87.714	Cyprinodon_variegatus
ENSMZEG00005008993	pcbp3	100	94.571	ENSDARG00000054378	pcbp3	100	94.571	Danio_rerio
ENSMZEG00005008993	pcbp3	96	74.924	ENSETEG00000015988	-	95	75.535	Echinops_telfairi
ENSMZEG00005008993	pcbp3	92	64.220	ENSEBUG00000005495	pcbp3	76	59.783	Eptatretus_burgeri
ENSMZEG00005008993	pcbp3	85	68.621	ENSEBUG00000016192	pcbp3	99	68.729	Eptatretus_burgeri
ENSMZEG00005008993	pcbp3	92	80.105	ENSEBUG00000007485	-	92	70.248	Eptatretus_burgeri
ENSMZEG00005008993	pcbp3	100	94.901	ENSELUG00000003521	pcbp3	100	94.901	Esox_lucius
ENSMZEG00005008993	pcbp3	100	88.000	ENSELUG00000001560	-	96	85.345	Esox_lucius
ENSMZEG00005008993	pcbp3	98	76.022	ENSFALG00000004411	-	77	76.022	Ficedula_albicollis
ENSMZEG00005008993	pcbp3	96	86.196	ENSFALG00000003949	-	93	88.601	Ficedula_albicollis
ENSMZEG00005008993	pcbp3	98	87.761	ENSFHEG00000006539	-	99	86.919	Fundulus_heteroclitus
ENSMZEG00005008993	pcbp3	98	89.790	ENSFHEG00000016615	pcbp3	98	87.755	Fundulus_heteroclitus
ENSMZEG00005008993	pcbp3	98	74.157	ENSGMOG00000011992	pcbp3	96	76.061	Gadus_morhua
ENSMZEG00005008993	pcbp3	97	67.236	ENSGMOG00000008611	-	100	67.139	Gadus_morhua
ENSMZEG00005008993	pcbp3	97	83.587	ENSGALG00000013155	-	98	83.792	Gallus_gallus
ENSMZEG00005008993	pcbp3	96	88.372	ENSGALG00000004394	-	96	87.896	Gallus_gallus
ENSMZEG00005008993	pcbp3	98	94.910	ENSGAFG00000011430	pcbp3	96	95.796	Gambusia_affinis
ENSMZEG00005008993	pcbp3	100	87.714	ENSGAFG00000010274	-	100	87.714	Gambusia_affinis
ENSMZEG00005008993	pcbp3	100	80.447	ENSGACG00000014955	-	99	80.447	Gasterosteus_aculeatus
ENSMZEG00005008993	pcbp3	98	82.102	ENSGACG00000002266	-	99	80.495	Gasterosteus_aculeatus
ENSMZEG00005008993	pcbp3	86	80.756	ENSGAGG00000000271	-	100	81.034	Gopherus_agassizii
ENSMZEG00005008993	pcbp3	90	85.909	ENSGAGG00000006956	-	93	82.479	Gopherus_agassizii
ENSMZEG00005008993	pcbp3	100	87.714	ENSHBUG00000021782	-	100	87.714	Haplochromis_burtoni
ENSMZEG00005008993	pcbp3	100	96.591	ENSHBUG00000010697	pcbp3	100	96.591	Haplochromis_burtoni
ENSMZEG00005008993	pcbp3	98	83.483	ENSHCOG00000006067	-	92	91.753	Hippocampus_comes
ENSMZEG00005008993	pcbp3	100	96.296	ENSHCOG00000017868	pcbp3	100	96.296	Hippocampus_comes
ENSMZEG00005008993	pcbp3	98	93.114	ENSIPUG00000006238	pcbp3	99	92.128	Ictalurus_punctatus
ENSMZEG00005008993	pcbp3	100	96.023	ENSKMAG00000003046	pcbp3	100	96.023	Kryptolebias_marmoratus
ENSMZEG00005008993	pcbp3	100	86.857	ENSKMAG00000018530	-	100	86.857	Kryptolebias_marmoratus
ENSMZEG00005008993	pcbp3	98	89.489	ENSLBEG00000006201	pcbp3	96	89.286	Labrus_bergylta
ENSMZEG00005008993	pcbp3	100	77.143	ENSLBEG00000006542	-	100	79.429	Labrus_bergylta
ENSMZEG00005008993	pcbp3	98	75.824	ENSLACG00000010804	zgc:110045	77	75.824	Latimeria_chalumnae
ENSMZEG00005008993	pcbp3	98	84.746	ENSLACG00000010386	pcbp3	77	84.022	Latimeria_chalumnae
ENSMZEG00005008993	pcbp3	96	83.486	ENSLOCG00000005058	zgc:110045	80	83.486	Lepisosteus_oculatus
ENSMZEG00005008993	pcbp3	96	92.966	ENSLOCG00000009369	pcbp3	98	91.964	Lepisosteus_oculatus
ENSMZEG00005008993	pcbp3	98	86.527	ENSMAMG00000011620	-	99	85.714	Mastacembelus_armatus
ENSMZEG00005008993	pcbp3	100	88.235	ENSMAMG00000022336	pcbp3	95	88.235	Mastacembelus_armatus
ENSMZEG00005008993	pcbp3	100	86.571	ENSMZEG00005014882	-	100	86.686	Maylandia_zebra
ENSMZEG00005008993	pcbp3	98	76.022	ENSMGAG00000006794	-	77	76.022	Meleagris_gallopavo
ENSMZEG00005008993	pcbp3	96	77.681	ENSMGAG00000001883	-	96	77.586	Meleagris_gallopavo
ENSMZEG00005008993	pcbp3	99	87.021	ENSMMOG00000000730	pcbp3	88	88.060	Mola_mola
ENSMZEG00005008993	pcbp3	98	86.826	ENSMMOG00000005216	-	99	86.006	Mola_mola
ENSMZEG00005008993	pcbp3	75	85.253	ENSMODG00000027884	-	95	85.253	Monodelphis_domestica
ENSMZEG00005008993	pcbp3	100	96.296	ENSMALG00000000691	pcbp3	100	96.296	Monopterus_albus
ENSMZEG00005008993	pcbp3	96	78.779	ENSMPUG00000001779	-	88	78.098	Mustela_putorius_furo
ENSMZEG00005008993	pcbp3	100	89.045	ENSNBRG00000016714	-	100	89.045	Neolamprologus_brichardi
ENSMZEG00005008993	pcbp3	100	97.143	ENSNBRG00000016409	-	100	97.143	Neolamprologus_brichardi
ENSMZEG00005008993	pcbp3	96	87.791	ENSOPRG00000003431	-	99	87.791	Ochotona_princeps
ENSMZEG00005008993	pcbp3	98	86.826	ENSONIG00000004611	-	99	86.006	Oreochromis_niloticus
ENSMZEG00005008993	pcbp3	98	92.308	ENSONIG00000012122	-	98	91.785	Oreochromis_niloticus
ENSMZEG00005008993	pcbp3	96	85.890	ENSOCUG00000002696	-	87	85.933	Oryctolagus_cuniculus
ENSMZEG00005008993	pcbp3	98	89.521	ENSORLG00000000059	pcbp3	100	90.390	Oryzias_latipes
ENSMZEG00005008993	pcbp3	99	87.679	ENSORLG00000022739	-	99	87.679	Oryzias_latipes
ENSMZEG00005008993	pcbp3	99	88.496	ENSORLG00020012671	pcbp3	99	88.496	Oryzias_latipes_hni
ENSMZEG00005008993	pcbp3	99	87.393	ENSORLG00020006124	-	99	87.393	Oryzias_latipes_hni
ENSMZEG00005008993	pcbp3	99	87.679	ENSORLG00015008051	-	99	87.679	Oryzias_latipes_hsok
ENSMZEG00005008993	pcbp3	99	88.496	ENSORLG00015000429	pcbp3	99	88.496	Oryzias_latipes_hsok
ENSMZEG00005008993	pcbp3	98	86.527	ENSOMEG00000020162	-	97	87.126	Oryzias_melastigma
ENSMZEG00005008993	pcbp3	90	89.869	ENSOMEG00000020811	pcbp3	96	92.000	Oryzias_melastigma
ENSMZEG00005008993	pcbp3	96	80.342	ENSOGAG00000008044	-	96	79.944	Otolemur_garnettii
ENSMZEG00005008993	pcbp3	100	87.143	ENSPKIG00000019329	pcbp3	100	87.143	Paramormyrops_kingsleyae
ENSMZEG00005008993	pcbp3	92	78.972	ENSPKIG00000020913	-	96	76.682	Paramormyrops_kingsleyae
ENSMZEG00005008993	pcbp3	72	84.553	ENSPSIG00000008350	-	72	81.226	Pelodiscus_sinensis
ENSMZEG00005008993	pcbp3	96	74.854	ENSPSIG00000014970	-	95	75.439	Pelodiscus_sinensis
ENSMZEG00005008993	pcbp3	100	96.000	ENSPMGG00000022383	pcbp3	100	96.000	Periophthalmus_magnuspinnatus
ENSMZEG00005008993	pcbp3	92	84.574	ENSPMAG00000004637	-	97	85.027	Petromyzon_marinus
ENSMZEG00005008993	pcbp3	96	66.970	ENSPMAG00000004551	pcbp3	90	66.172	Petromyzon_marinus
ENSMZEG00005008993	pcbp3	96	92.661	ENSPCIG00000028092	-	96	93.272	Phascolarctos_cinereus
ENSMZEG00005008993	pcbp3	97	84.706	ENSPLAG00000004074	-	89	84.706	Poecilia_latipinna
ENSMZEG00005008993	pcbp3	98	90.598	ENSPLAG00000011449	pcbp3	100	83.500	Poecilia_latipinna
ENSMZEG00005008993	pcbp3	100	96.045	ENSPMEG00000021239	pcbp3	100	96.045	Poecilia_mexicana
ENSMZEG00005008993	pcbp3	100	87.714	ENSPMEG00000006653	-	100	87.714	Poecilia_mexicana
ENSMZEG00005008993	pcbp3	94	92.308	ENSPREG00000020585	-	97	87.425	Poecilia_reticulata
ENSMZEG00005008993	pcbp3	98	87.798	ENSPREG00000015736	pcbp3	99	88.657	Poecilia_reticulata
ENSMZEG00005008993	pcbp3	98	86.826	ENSPNYG00000013205	-	99	86.006	Pundamilia_nyererei
ENSMZEG00005008993	pcbp3	99	91.445	ENSPNYG00000012326	pcbp3	97	91.445	Pundamilia_nyererei
ENSMZEG00005008993	pcbp3	98	87.425	ENSPNAG00000015104	pcbp3	99	86.589	Pygocentrus_nattereri
ENSMZEG00005008993	pcbp3	100	92.023	ENSPNAG00000008541	-	100	92.023	Pygocentrus_nattereri
ENSMZEG00005008993	pcbp3	96	85.933	ENSRNOG00000001245	Pcbp3	95	86.544	Rattus_norvegicus
ENSMZEG00005008993	pcbp3	96	79.775	ENSRBIG00000028177	-	98	78.261	Rhinopithecus_bieti
ENSMZEG00005008993	pcbp3	96	82.235	ENSSHAG00000007890	-	96	81.268	Sarcophilus_harrisii
ENSMZEG00005008993	pcbp3	97	77.576	ENSSFOG00015007118	-	94	77.576	Scleropages_formosus
ENSMZEG00005008993	pcbp3	98	93.994	ENSSFOG00015010205	pcbp3	100	94.294	Scleropages_formosus
ENSMZEG00005008993	pcbp3	100	92.571	ENSSFOG00015014706	pcbp3	100	92.571	Scleropages_formosus
ENSMZEG00005008993	pcbp3	100	87.429	ENSSMAG00000003135	-	100	87.429	Scophthalmus_maximus
ENSMZEG00005008993	pcbp3	99	88.496	ENSSMAG00000011929	pcbp3	99	88.496	Scophthalmus_maximus
ENSMZEG00005008993	pcbp3	99	96.726	ENSSDUG00000011608	pcbp3	99	96.726	Seriola_dumerili
ENSMZEG00005008993	pcbp3	100	88.857	ENSSDUG00000008502	-	100	88.857	Seriola_dumerili
ENSMZEG00005008993	pcbp3	100	88.286	ENSSLDG00000020161	-	100	88.286	Seriola_lalandi_dorsalis
ENSMZEG00005008993	pcbp3	99	96.726	ENSSLDG00000008518	pcbp3	99	96.726	Seriola_lalandi_dorsalis
ENSMZEG00005008993	pcbp3	92	87.097	ENSSPUG00000013214	-	92	84.536	Sphenodon_punctatus
ENSMZEG00005008993	pcbp3	100	86.286	ENSSPAG00000023341	-	100	86.286	Stegastes_partitus
ENSMZEG00005008993	pcbp3	86	85.809	ENSSPAG00000004190	-	99	84.127	Stegastes_partitus
ENSMZEG00005008993	pcbp3	96	80.122	ENSTGUG00000008158	-	96	80.428	Taeniopygia_guttata
ENSMZEG00005008993	pcbp3	96	77.841	ENSTGUG00000003316	-	96	77.966	Taeniopygia_guttata
ENSMZEG00005008993	pcbp3	100	92.857	ENSTRUG00000013604	pcbp3	100	92.857	Takifugu_rubripes
ENSMZEG00005008993	pcbp3	88	88.704	ENSTRUG00000006280	-	91	87.742	Takifugu_rubripes
ENSMZEG00005008993	pcbp3	96	86.337	ENSTTRG00000015075	-	96	85.879	Tursiops_truncatus
ENSMZEG00005008993	pcbp3	92	76.855	ENSXETG00000010491	pcbp2	77	74.504	Xenopus_tropicalis
ENSMZEG00005008993	pcbp3	96	80.580	ENSXETG00000011483	pcbp1	96	80.692	Xenopus_tropicalis
ENSMZEG00005008993	pcbp3	100	96.045	ENSXCOG00000020481	pcbp3	100	96.045	Xiphophorus_couchianus
ENSMZEG00005008993	pcbp3	100	88.000	ENSXMAG00000028711	-	100	88.000	Xiphophorus_maculatus
ENSMZEG00005008993	pcbp3	100	96.307	ENSXMAG00000008175	pcbp3	100	96.307	Xiphophorus_maculatus