EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005009141 (Gene tree)
Gene ID: 101471819
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 9982 bases
Position: chrLG5:7297168-7307149
Accession: 101471819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005012166	PolyA_pol	PF01743.20	9.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005012594	-	2561	XM_004567390	ENSMZEP00005012166	427 (aa)	XP_004567447	UPI000329A0D8

Gene Model

Click here to download ENSMZEG00005009141's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005009141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005009141	trnt1	99	67.294	ENSG00000072756	TRNT1	98	67.294	Homo_sapiens
ENSMZEG00005009141	trnt1	99	85.882	ENSAPOG00000013687	trnt1	99	85.882	Acanthochromis_polyacanthus
ENSMZEG00005009141	trnt1	99	66.979	ENSAMEG00000014520	TRNT1	98	66.979	Ailuropoda_melanoleuca
ENSMZEG00005009141	trnt1	99	93.897	ENSACIG00000021706	trnt1	99	93.897	Amphilophus_citrinellus
ENSMZEG00005009141	trnt1	99	88.028	ENSAOCG00000024612	trnt1	99	88.028	Amphiprion_ocellaris
ENSMZEG00005009141	trnt1	96	81.509	ENSAPEG00000022627	trnt1	95	81.509	Amphiprion_percula
ENSMZEG00005009141	trnt1	94	89.082	ENSATEG00000008928	trnt1	99	89.082	Anabas_testudineus
ENSMZEG00005009141	trnt1	94	64.516	ENSAPLG00000004258	TRNT1	99	64.516	Anas_platyrhynchos
ENSMZEG00005009141	trnt1	96	65.037	ENSACAG00000005657	TRNT1	93	65.037	Anolis_carolinensis
ENSMZEG00005009141	trnt1	99	67.136	ENSANAG00000024802	TRNT1	98	67.136	Aotus_nancymaae
ENSMZEG00005009141	trnt1	100	100.000	ENSACLG00000022227	trnt1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005009141	trnt1	99	76.168	ENSAMXG00000003960	trnt1	99	76.168	Astyanax_mexicanus
ENSMZEG00005009141	trnt1	99	65.647	ENSBTAG00000019534	TRNT1	98	65.647	Bos_taurus
ENSMZEG00005009141	trnt1	95	43.301	WBGene00010089	hpo-31	94	43.301	Caenorhabditis_elegans
ENSMZEG00005009141	trnt1	99	67.371	ENSCJAG00000015466	TRNT1	98	67.371	Callithrix_jacchus
ENSMZEG00005009141	trnt1	97	67.943	ENSCAFG00000005985	TRNT1	96	67.943	Canis_familiaris
ENSMZEG00005009141	trnt1	97	67.943	ENSCAFG00020014746	TRNT1	96	67.943	Canis_lupus_dingo
ENSMZEG00005009141	trnt1	99	66.353	ENSCHIG00000007030	TRNT1	97	66.353	Capra_hircus
ENSMZEG00005009141	trnt1	99	67.529	ENSTSYG00000013390	TRNT1	98	67.529	Carlito_syrichta
ENSMZEG00005009141	trnt1	88	55.172	ENSCAPG00000006891	TRNT1	99	55.172	Cavia_aperea
ENSMZEG00005009141	trnt1	99	67.294	ENSCPOG00000007849	TRNT1	98	67.294	Cavia_porcellus
ENSMZEG00005009141	trnt1	96	67.150	ENSCCAG00000002919	TRNT1	99	67.150	Cebus_capucinus
ENSMZEG00005009141	trnt1	99	68.310	ENSCATG00000031985	TRNT1	97	68.310	Cercocebus_atys
ENSMZEG00005009141	trnt1	99	67.529	ENSCLAG00000005186	TRNT1	92	75.510	Chinchilla_lanigera
ENSMZEG00005009141	trnt1	99	68.310	ENSCSAG00000011052	TRNT1	98	68.310	Chlorocebus_sabaeus
ENSMZEG00005009141	trnt1	84	73.846	ENSCHOG00000005712	TRNT1	83	73.846	Choloepus_hoffmanni
ENSMZEG00005009141	trnt1	96	68.382	ENSCPBG00000017636	TRNT1	93	68.382	Chrysemys_picta_bellii
ENSMZEG00005009141	trnt1	94	40.741	ENSCING00000007069	-	99	40.741	Ciona_intestinalis
ENSMZEG00005009141	trnt1	94	40.347	ENSCSAVG00000007494	-	95	40.347	Ciona_savignyi
ENSMZEG00005009141	trnt1	99	68.545	ENSCANG00000039030	TRNT1	98	68.545	Colobus_angolensis_palliatus
ENSMZEG00005009141	trnt1	99	66.588	ENSCGRG00001009998	Trnt1	98	66.588	Cricetulus_griseus_chok1gshd
ENSMZEG00005009141	trnt1	99	66.588	ENSCGRG00000013410	Trnt1	96	72.906	Cricetulus_griseus_crigri
ENSMZEG00005009141	trnt1	100	82.670	ENSCSEG00000008157	trnt1	100	82.670	Cynoglossus_semilaevis
ENSMZEG00005009141	trnt1	99	86.385	ENSCVAG00000019770	trnt1	99	86.385	Cyprinodon_variegatus
ENSMZEG00005009141	trnt1	99	79.108	ENSDARG00000075297	trnt1	99	79.108	Danio_rerio
ENSMZEG00005009141	trnt1	99	68.000	ENSDNOG00000008837	TRNT1	98	68.000	Dasypus_novemcinctus
ENSMZEG00005009141	trnt1	99	66.279	ENSDORG00000014035	Trnt1	99	66.279	Dipodomys_ordii
ENSMZEG00005009141	trnt1	94	48.267	FBgn0037369	CG2100	83	48.267	Drosophila_melanogaster
ENSMZEG00005009141	trnt1	58	71.486	ENSETEG00000018177	TRNT1	100	71.486	Echinops_telfairi
ENSMZEG00005009141	trnt1	99	60.606	ENSEBUG00000012779	-	99	60.606	Eptatretus_burgeri
ENSMZEG00005009141	trnt1	99	68.235	ENSEASG00005003577	TRNT1	98	68.235	Equus_asinus_asinus
ENSMZEG00005009141	trnt1	99	68.471	ENSECAG00000014420	TRNT1	98	68.471	Equus_caballus
ENSMZEG00005009141	trnt1	99	67.765	ENSEEUG00000009567	TRNT1	97	67.765	Erinaceus_europaeus
ENSMZEG00005009141	trnt1	99	78.689	ENSELUG00000003802	trnt1	99	78.689	Esox_lucius
ENSMZEG00005009141	trnt1	99	66.824	ENSFCAG00000026805	TRNT1	97	66.824	Felis_catus
ENSMZEG00005009141	trnt1	90	67.885	ENSFALG00000013539	TRNT1	99	67.885	Ficedula_albicollis
ENSMZEG00005009141	trnt1	99	66.588	ENSFDAG00000018412	TRNT1	98	66.588	Fukomys_damarensis
ENSMZEG00005009141	trnt1	99	84.742	ENSFHEG00000019294	trnt1	99	84.742	Fundulus_heteroclitus
ENSMZEG00005009141	trnt1	99	79.577	ENSGMOG00000007460	trnt1	100	79.577	Gadus_morhua
ENSMZEG00005009141	trnt1	99	64.235	ENSGALG00000017368	TRNT1	97	64.235	Gallus_gallus
ENSMZEG00005009141	trnt1	100	81.733	ENSGAFG00000008647	trnt1	100	81.733	Gambusia_affinis
ENSMZEG00005009141	trnt1	99	84.977	ENSGACG00000011903	trnt1	99	84.977	Gasterosteus_aculeatus
ENSMZEG00005009141	trnt1	99	65.525	ENSGAGG00000020942	TRNT1	99	65.525	Gopherus_agassizii
ENSMZEG00005009141	trnt1	99	67.529	ENSGGOG00000015286	TRNT1	98	67.529	Gorilla_gorilla
ENSMZEG00005009141	trnt1	100	99.766	ENSHBUG00000002797	trnt1	100	99.766	Haplochromis_burtoni
ENSMZEG00005009141	trnt1	99	62.676	ENSHGLG00000000221	-	96	62.676	Heterocephalus_glaber_female
ENSMZEG00005009141	trnt1	99	66.588	ENSHGLG00000003649	TRNT1	98	66.588	Heterocephalus_glaber_female
ENSMZEG00005009141	trnt1	99	65.412	ENSHGLG00100016421	TRNT1	98	65.412	Heterocephalus_glaber_male
ENSMZEG00005009141	trnt1	99	78.169	ENSHCOG00000010618	trnt1	99	78.169	Hippocampus_comes
ENSMZEG00005009141	trnt1	99	77.336	ENSIPUG00000000971	trnt1	99	77.336	Ictalurus_punctatus
ENSMZEG00005009141	trnt1	99	66.744	ENSSTOG00000000150	TRNT1	97	73.632	Ictidomys_tridecemlineatus
ENSMZEG00005009141	trnt1	99	66.432	ENSJJAG00000018561	Trnt1	98	66.432	Jaculus_jaculus
ENSMZEG00005009141	trnt1	100	86.885	ENSKMAG00000011307	trnt1	100	86.885	Kryptolebias_marmoratus
ENSMZEG00005009141	trnt1	96	80.292	ENSLBEG00000019457	trnt1	97	80.292	Labrus_bergylta
ENSMZEG00005009141	trnt1	95	71.499	ENSLACG00000013227	TRNT1	94	71.499	Latimeria_chalumnae
ENSMZEG00005009141	trnt1	99	74.126	ENSLOCG00000011105	trnt1	98	74.126	Lepisosteus_oculatus
ENSMZEG00005009141	trnt1	99	67.059	ENSLAFG00000023191	TRNT1	98	67.059	Loxodonta_africana
ENSMZEG00005009141	trnt1	99	68.310	ENSMFAG00000045113	TRNT1	97	68.310	Macaca_fascicularis
ENSMZEG00005009141	trnt1	99	68.310	ENSMMUG00000017983	TRNT1	97	68.310	Macaca_mulatta
ENSMZEG00005009141	trnt1	99	68.310	ENSMNEG00000037805	TRNT1	97	68.310	Macaca_nemestrina
ENSMZEG00005009141	trnt1	89	70.157	ENSMLEG00000033671	TRNT1	99	70.157	Mandrillus_leucophaeus
ENSMZEG00005009141	trnt1	99	85.915	ENSMAMG00000023401	trnt1	99	85.915	Mastacembelus_armatus
ENSMZEG00005009141	trnt1	75	64.577	ENSMGAG00000009971	TRNT1	99	64.577	Meleagris_gallopavo
ENSMZEG00005009141	trnt1	99	66.353	ENSMAUG00000020707	Trnt1	98	66.353	Mesocricetus_auratus
ENSMZEG00005009141	trnt1	99	67.294	ENSMICG00000016615	TRNT1	98	67.294	Microcebus_murinus
ENSMZEG00005009141	trnt1	99	66.588	ENSMOCG00000004539	Trnt1	98	66.588	Microtus_ochrogaster
ENSMZEG00005009141	trnt1	99	85.446	ENSMMOG00000010742	trnt1	99	85.446	Mola_mola
ENSMZEG00005009141	trnt1	97	66.908	ENSMODG00000004368	TRNT1	95	66.908	Monodelphis_domestica
ENSMZEG00005009141	trnt1	99	83.333	ENSMALG00000008376	trnt1	99	83.333	Monopterus_albus
ENSMZEG00005009141	trnt1	99	66.824	MGP_CAROLIEiJ_G0028698	Trnt1	96	71.648	Mus_caroli
ENSMZEG00005009141	trnt1	99	66.588	ENSMUSG00000013736	Trnt1	91	75.510	Mus_musculus
ENSMZEG00005009141	trnt1	99	67.765	MGP_PahariEiJ_G0022449	Trnt1	97	76.531	Mus_pahari
ENSMZEG00005009141	trnt1	99	66.824	MGP_SPRETEiJ_G0029726	Trnt1	91	75.510	Mus_spretus
ENSMZEG00005009141	trnt1	99	66.353	ENSMPUG00000017017	TRNT1	95	66.353	Mustela_putorius_furo
ENSMZEG00005009141	trnt1	90	69.271	ENSMLUG00000011864	TRNT1	99	69.271	Myotis_lucifugus
ENSMZEG00005009141	trnt1	99	67.059	ENSNGAG00000000537	Trnt1	96	67.059	Nannospalax_galili
ENSMZEG00005009141	trnt1	81	97.977	ENSNBRG00000023606	trnt1	99	97.977	Neolamprologus_brichardi
ENSMZEG00005009141	trnt1	99	68.075	ENSNLEG00000003226	TRNT1	98	68.075	Nomascus_leucogenys
ENSMZEG00005009141	trnt1	97	66.667	ENSMEUG00000004684	TRNT1	95	66.667	Notamacropus_eugenii
ENSMZEG00005009141	trnt1	89	64.136	ENSOPRG00000015067	TRNT1	99	64.136	Ochotona_princeps
ENSMZEG00005009141	trnt1	99	67.529	ENSODEG00000007597	TRNT1	98	67.529	Octodon_degus
ENSMZEG00005009141	trnt1	99	97.418	ENSONIG00000020273	trnt1	98	97.418	Oreochromis_niloticus
ENSMZEG00005009141	trnt1	95	64.128	ENSOANG00000007514	TRNT1	94	64.128	Ornithorhynchus_anatinus
ENSMZEG00005009141	trnt1	99	64.706	ENSOCUG00000008580	TRNT1	99	64.706	Oryctolagus_cuniculus
ENSMZEG00005009141	trnt1	100	79.021	ENSORLG00000003165	trnt1	100	79.021	Oryzias_latipes
ENSMZEG00005009141	trnt1	100	79.254	ENSORLG00020022060	trnt1	100	79.254	Oryzias_latipes_hni
ENSMZEG00005009141	trnt1	100	79.254	ENSORLG00015018915	trnt1	99	79.254	Oryzias_latipes_hsok
ENSMZEG00005009141	trnt1	100	77.518	ENSOMEG00000003331	trnt1	100	77.518	Oryzias_melastigma
ENSMZEG00005009141	trnt1	99	66.353	ENSOARG00000008631	TRNT1	97	66.353	Ovis_aries
ENSMZEG00005009141	trnt1	99	67.294	ENSPPAG00000043566	TRNT1	98	67.294	Pan_paniscus
ENSMZEG00005009141	trnt1	99	66.824	ENSPPRG00000001327	TRNT1	97	66.824	Panthera_pardus
ENSMZEG00005009141	trnt1	99	66.824	ENSPTIG00000011448	TRNT1	97	66.824	Panthera_tigris_altaica
ENSMZEG00005009141	trnt1	99	67.294	ENSPTRG00000014564	TRNT1	98	67.294	Pan_troglodytes
ENSMZEG00005009141	trnt1	99	68.310	ENSPANG00000025944	TRNT1	97	68.310	Papio_anubis
ENSMZEG00005009141	trnt1	99	74.766	ENSPKIG00000020015	trnt1	99	74.766	Paramormyrops_kingsleyae
ENSMZEG00005009141	trnt1	93	68.608	ENSPSIG00000017356	TRNT1	99	69.167	Pelodiscus_sinensis
ENSMZEG00005009141	trnt1	99	79.812	ENSPMGG00000008888	trnt1	98	79.812	Periophthalmus_magnuspinnatus
ENSMZEG00005009141	trnt1	99	66.118	ENSPEMG00000019845	Trnt1	98	66.118	Peromyscus_maniculatus_bairdii
ENSMZEG00005009141	trnt1	99	66.825	ENSPCIG00000030436	TRNT1	97	66.825	Phascolarctos_cinereus
ENSMZEG00005009141	trnt1	99	82.547	ENSPFOG00000006194	trnt1	99	82.547	Poecilia_formosa
ENSMZEG00005009141	trnt1	99	82.547	ENSPLAG00000015623	trnt1	100	84.406	Poecilia_latipinna
ENSMZEG00005009141	trnt1	100	82.436	ENSPMEG00000012216	trnt1	100	84.158	Poecilia_mexicana
ENSMZEG00005009141	trnt1	100	81.967	ENSPREG00000021470	trnt1	100	81.967	Poecilia_reticulata
ENSMZEG00005009141	trnt1	99	67.606	ENSPPYG00000013702	TRNT1	98	67.606	Pongo_abelii
ENSMZEG00005009141	trnt1	89	70.157	ENSPCAG00000001951	TRNT1	99	70.157	Procavia_capensis
ENSMZEG00005009141	trnt1	99	67.294	ENSPCOG00000022228	TRNT1	98	67.294	Propithecus_coquereli
ENSMZEG00005009141	trnt1	89	68.848	ENSPVAG00000008784	TRNT1	99	68.848	Pteropus_vampyrus
ENSMZEG00005009141	trnt1	100	99.063	ENSPNYG00000003120	trnt1	100	99.063	Pundamilia_nyererei
ENSMZEG00005009141	trnt1	99	77.336	ENSPNAG00000000565	trnt1	99	77.336	Pygocentrus_nattereri
ENSMZEG00005009141	trnt1	99	67.059	ENSRNOG00000006432	Trnt1	98	67.059	Rattus_norvegicus
ENSMZEG00005009141	trnt1	99	67.371	ENSRBIG00000042632	TRNT1	98	67.371	Rhinopithecus_bieti
ENSMZEG00005009141	trnt1	99	68.310	ENSRROG00000036866	TRNT1	98	68.310	Rhinopithecus_roxellana
ENSMZEG00005009141	trnt1	99	67.371	ENSSBOG00000021208	TRNT1	98	67.371	Saimiri_boliviensis_boliviensis
ENSMZEG00005009141	trnt1	96	66.667	ENSSHAG00000018861	TRNT1	95	66.667	Sarcophilus_harrisii
ENSMZEG00005009141	trnt1	99	74.126	ENSSFOG00015020844	trnt1	99	74.126	Scleropages_formosus
ENSMZEG00005009141	trnt1	99	85.915	ENSSMAG00000015432	trnt1	98	85.915	Scophthalmus_maximus
ENSMZEG00005009141	trnt1	99	89.906	ENSSDUG00000012320	trnt1	100	89.906	Seriola_dumerili
ENSMZEG00005009141	trnt1	99	89.437	ENSSLDG00000009325	trnt1	100	89.437	Seriola_lalandi_dorsalis
ENSMZEG00005009141	trnt1	56	84.519	ENSSLDG00000016463	-	91	84.519	Seriola_lalandi_dorsalis
ENSMZEG00005009141	trnt1	89	70.157	ENSSPUG00000014153	TRNT1	99	70.157	Sphenodon_punctatus
ENSMZEG00005009141	trnt1	99	86.385	ENSSPAG00000021005	trnt1	99	86.385	Stegastes_partitus
ENSMZEG00005009141	trnt1	99	67.059	ENSSSCG00000011529	TRNT1	98	67.059	Sus_scrofa
ENSMZEG00005009141	trnt1	95	66.832	ENSTGUG00000010192	TRNT1	99	66.832	Taeniopygia_guttata
ENSMZEG00005009141	trnt1	99	84.038	ENSTRUG00000001088	trnt1	99	84.038	Takifugu_rubripes
ENSMZEG00005009141	trnt1	99	82.864	ENSTNIG00000007363	trnt1	98	82.864	Tetraodon_nigroviridis
ENSMZEG00005009141	trnt1	61	60.076	ENSTBEG00000006367	TRNT1	86	60.076	Tupaia_belangeri
ENSMZEG00005009141	trnt1	99	66.353	ENSTTRG00000007803	TRNT1	98	66.353	Tursiops_truncatus
ENSMZEG00005009141	trnt1	99	67.059	ENSUAMG00000022574	TRNT1	97	67.059	Ursus_americanus
ENSMZEG00005009141	trnt1	99	67.294	ENSUMAG00000024092	TRNT1	97	67.294	Ursus_maritimus
ENSMZEG00005009141	trnt1	97	67.943	ENSVVUG00000012810	TRNT1	96	67.943	Vulpes_vulpes
ENSMZEG00005009141	trnt1	98	60.476	ENSXETG00000025091	trnt1	99	61.443	Xenopus_tropicalis
ENSMZEG00005009141	trnt1	100	81.499	ENSXCOG00000010150	trnt1	100	81.499	Xiphophorus_couchianus
ENSMZEG00005009141	trnt1	100	81.967	ENSXMAG00000002227	trnt1	100	81.967	Xiphophorus_maculatus