EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005009488 (Gene tree)
Gene ID: 101480001
Gene Symbol: -
Alias: -
Full Name: small nuclear RNA activating complex polypeptide 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 11819 bases
Position: chrLG3:34601032-34612850
Accession: 101480001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005012636	SnAPC_2_like	PF11035.8	1.2e-69	1	1
ENSMZEP00005012644	SnAPC_2_like	PF11035.8	3.5e-60	1	1
ENSMZEP00005012628	SnAPC_2_like	PF11035.8	1.6e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005013080	-	2745	XM_004574809	ENSMZEP00005012636	481 (aa)	XP_004574866	UPI000329FEF0
ENSMZET00005013072	-	3094	-	ENSMZEP00005012628	438 (aa)	-	-
ENSMZET00005013088	-	975	-	ENSMZEP00005012644	324 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005009488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005009488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005009488	-	92	32.827	ENSG00000104976	SNAPC2	98	33.333	Homo_sapiens
ENSMZEG00005009488	-	98	41.765	ENSAPOG00000000954	-	84	66.667	Acanthochromis_polyacanthus
ENSMZEG00005009488	-	58	34.211	ENSAMEG00000008622	SNAPC2	79	34.211	Ailuropoda_melanoleuca
ENSMZEG00005009488	-	100	58.631	ENSACIG00000019919	-	99	59.941	Amphilophus_citrinellus
ENSMZEG00005009488	-	55	49.819	ENSAOCG00000012420	-	65	54.082	Amphiprion_ocellaris
ENSMZEG00005009488	-	98	53.915	ENSAOCG00000013265	-	99	51.077	Amphiprion_ocellaris
ENSMZEG00005009488	-	99	51.594	ENSAPEG00000010950	-	99	51.385	Amphiprion_percula
ENSMZEG00005009488	-	97	48.718	ENSATEG00000003573	-	85	54.245	Anabas_testudineus
ENSMZEG00005009488	-	58	33.333	ENSACAG00000026540	-	80	33.333	Anolis_carolinensis
ENSMZEG00005009488	-	98	33.913	ENSANAG00000029939	SNAPC2	97	37.342	Aotus_nancymaae
ENSMZEG00005009488	-	100	99.383	ENSACLG00000013092	-	100	99.383	Astatotilapia_calliptera
ENSMZEG00005009488	-	80	36.296	ENSAMXG00000038205	snapc2	68	40.196	Astyanax_mexicanus
ENSMZEG00005009488	-	92	32.424	ENSBTAG00000014926	SNAPC2	94	31.515	Bos_taurus
ENSMZEG00005009488	-	92	33.540	ENSCJAG00000006117	SNAPC2	98	33.918	Callithrix_jacchus
ENSMZEG00005009488	-	98	31.287	ENSCAFG00000031676	SNAPC2	76	53.968	Canis_familiaris
ENSMZEG00005009488	-	98	31.287	ENSCAFG00020022851	SNAPC2	76	53.968	Canis_lupus_dingo
ENSMZEG00005009488	-	82	31.636	ENSTSYG00000037088	SNAPC2	72	50.000	Carlito_syrichta
ENSMZEG00005009488	-	92	32.000	ENSCCAG00000034172	SNAPC2	98	32.370	Cebus_capucinus
ENSMZEG00005009488	-	92	32.716	ENSCATG00000037131	SNAPC2	98	33.140	Cercocebus_atys
ENSMZEG00005009488	-	98	30.423	ENSCLAG00000006885	SNAPC2	70	38.462	Chinchilla_lanigera
ENSMZEG00005009488	-	92	32.622	ENSCSAG00000008167	SNAPC2	98	33.721	Chlorocebus_sabaeus
ENSMZEG00005009488	-	74	35.200	ENSCPBG00000002277	SNAPC2	59	34.800	Chrysemys_picta_bellii
ENSMZEG00005009488	-	92	32.827	ENSCANG00000040525	SNAPC2	98	34.756	Colobus_angolensis_palliatus
ENSMZEG00005009488	-	52	51.786	ENSCGRG00001006223	Snapc2	68	50.746	Cricetulus_griseus_chok1gshd
ENSMZEG00005009488	-	78	30.201	ENSCGRG00000005622	Snapc2	66	50.746	Cricetulus_griseus_crigri
ENSMZEG00005009488	-	93	36.774	ENSCSEG00000014882	-	93	34.810	Cynoglossus_semilaevis
ENSMZEG00005009488	-	61	63.934	ENSCVAG00000011360	-	83	63.934	Cyprinodon_variegatus
ENSMZEG00005009488	-	76	37.121	ENSDARG00000036473	snapc2	64	37.121	Danio_rerio
ENSMZEG00005009488	-	58	34.586	ENSDNOG00000036458	SNAPC2	77	33.846	Dasypus_novemcinctus
ENSMZEG00005009488	-	92	31.677	ENSDORG00000009155	Snapc2	92	36.424	Dipodomys_ordii
ENSMZEG00005009488	-	57	33.775	ENSETEG00000012986	SNAPC2	79	33.333	Echinops_telfairi
ENSMZEG00005009488	-	98	31.429	ENSECAG00000011011	SNAPC2	93	30.488	Equus_caballus
ENSMZEG00005009488	-	74	35.989	ENSELUG00000010380	-	72	40.323	Esox_lucius
ENSMZEG00005009488	-	91	32.615	ENSFCAG00000014945	SNAPC2	69	56.604	Felis_catus
ENSMZEG00005009488	-	76	30.935	ENSFDAG00000001564	SNAPC2	95	34.641	Fukomys_damarensis
ENSMZEG00005009488	-	74	34.118	ENSGAGG00000015845	SNAPC2	59	33.333	Gopherus_agassizii
ENSMZEG00005009488	-	92	31.915	ENSGGOG00000022392	SNAPC2	98	32.164	Gorilla_gorilla
ENSMZEG00005009488	-	58	33.113	ENSHGLG00000011707	SNAPC2	74	31.447	Heterocephalus_glaber_female
ENSMZEG00005009488	-	51	33.113	ENSHGLG00100003422	SNAPC2	58	35.659	Heterocephalus_glaber_male
ENSMZEG00005009488	-	100	34.349	ENSHCOG00000002795	-	98	40.000	Hippocampus_comes
ENSMZEG00005009488	-	98	30.986	ENSJJAG00000003060	Snapc2	98	30.286	Jaculus_jaculus
ENSMZEG00005009488	-	99	44.490	ENSKMAG00000007231	-	99	43.238	Kryptolebias_marmoratus
ENSMZEG00005009488	-	77	45.594	ENSLBEG00000009986	-	86	42.647	Labrus_bergylta
ENSMZEG00005009488	-	63	34.722	ENSLOCG00000014065	snapc2	92	32.821	Lepisosteus_oculatus
ENSMZEG00005009488	-	92	32.927	ENSMFAG00000034273	SNAPC2	97	35.366	Macaca_fascicularis
ENSMZEG00005009488	-	92	32.927	ENSMMUG00000006540	SNAPC2	98	33.453	Macaca_mulatta
ENSMZEG00005009488	-	92	32.716	ENSMNEG00000039547	SNAPC2	98	34.466	Macaca_nemestrina
ENSMZEG00005009488	-	92	32.716	ENSMLEG00000031059	SNAPC2	98	33.140	Mandrillus_leucophaeus
ENSMZEG00005009488	-	99	44.808	ENSMAMG00000018195	-	96	44.091	Mastacembelus_armatus
ENSMZEG00005009488	-	98	30.894	ENSMICG00000035695	SNAPC2	98	30.133	Microcebus_murinus
ENSMZEG00005009488	-	58	32.468	ENSMOCG00000019080	Snapc2	54	48.529	Microtus_ochrogaster
ENSMZEG00005009488	-	57	69.767	ENSMMOG00000020608	-	68	68.293	Mola_mola
ENSMZEG00005009488	-	71	37.295	ENSMODG00000005069	-	90	30.904	Monodelphis_domestica
ENSMZEG00005009488	-	98	46.724	ENSMALG00000002335	-	95	57.233	Monopterus_albus
ENSMZEG00005009488	-	58	34.211	MGP_CAROLIEiJ_G0030795	Snapc2	70	32.468	Mus_caroli
ENSMZEG00005009488	-	58	32.680	ENSMUSG00000011837	Snapc2	70	31.169	Mus_musculus
ENSMZEG00005009488	-	58	32.680	MGP_SPRETEiJ_G0031903	Snapc2	70	31.818	Mus_spretus
ENSMZEG00005009488	-	58	34.416	ENSMPUG00000008010	SNAPC2	76	34.091	Mustela_putorius_furo
ENSMZEG00005009488	-	92	31.193	ENSMLUG00000013689	-	98	31.412	Myotis_lucifugus
ENSMZEG00005009488	-	69	32.456	ENSMLUG00000002738	-	59	52.381	Myotis_lucifugus
ENSMZEG00005009488	-	72	30.738	ENSMLUG00000006427	-	76	47.945	Myotis_lucifugus
ENSMZEG00005009488	-	68	32.000	ENSMLUG00000001710	-	64	31.111	Myotis_lucifugus
ENSMZEG00005009488	-	61	32.020	ENSMLUG00000013735	-	62	33.498	Myotis_lucifugus
ENSMZEG00005009488	-	77	30.961	ENSNGAG00000014201	Snapc2	92	30.961	Nannospalax_galili
ENSMZEG00005009488	-	100	95.370	ENSNBRG00000003764	-	100	95.370	Neolamprologus_brichardi
ENSMZEG00005009488	-	92	33.022	ENSNLEG00000001250	SNAPC2	98	33.918	Nomascus_leucogenys
ENSMZEG00005009488	-	89	32.609	ENSMEUG00000014367	SNAPC2	91	32.911	Notamacropus_eugenii
ENSMZEG00005009488	-	98	30.000	ENSODEG00000011415	SNAPC2	73	50.909	Octodon_degus
ENSMZEG00005009488	-	73	90.323	ENSONIG00000002078	-	100	80.660	Oreochromis_niloticus
ENSMZEG00005009488	-	92	30.723	ENSOCUG00000027536	SNAPC2	72	30.723	Oryctolagus_cuniculus
ENSMZEG00005009488	-	99	38.877	ENSORLG00000010375	-	56	71.667	Oryzias_latipes
ENSMZEG00005009488	-	99	39.666	ENSORLG00020015071	-	68	71.667	Oryzias_latipes_hni
ENSMZEG00005009488	-	94	35.449	ENSORLG00015016075	-	92	34.120	Oryzias_latipes_hsok
ENSMZEG00005009488	-	94	38.646	ENSOMEG00000003040	snapc2	91	35.620	Oryzias_melastigma
ENSMZEG00005009488	-	98	30.259	ENSOGAG00000012870	SNAPC2	95	34.000	Otolemur_garnettii
ENSMZEG00005009488	-	77	33.688	ENSOARG00000003045	SNAPC2	98	31.915	Ovis_aries
ENSMZEG00005009488	-	92	32.219	ENSPPAG00000032460	SNAPC2	98	32.749	Pan_paniscus
ENSMZEG00005009488	-	91	32.710	ENSPPRG00000003265	SNAPC2	69	56.604	Panthera_pardus
ENSMZEG00005009488	-	63	35.238	ENSPTIG00000016014	SNAPC2	51	53.968	Panthera_tigris_altaica
ENSMZEG00005009488	-	92	33.131	ENSPTRG00000042034	SNAPC2	98	33.626	Pan_troglodytes
ENSMZEG00005009488	-	92	32.622	ENSPANG00000025882	SNAPC2	98	33.046	Papio_anubis
ENSMZEG00005009488	-	76	35.000	ENSPKIG00000000084	snapc2	56	53.846	Paramormyrops_kingsleyae
ENSMZEG00005009488	-	74	34.137	ENSPSIG00000016099	SNAPC2	55	50.000	Pelodiscus_sinensis
ENSMZEG00005009488	-	91	30.330	ENSPEMG00000009767	Snapc2	94	30.952	Peromyscus_maniculatus_bairdii
ENSMZEG00005009488	-	99	40.657	ENSPFOG00000012045	-	99	41.633	Poecilia_formosa
ENSMZEG00005009488	-	99	41.944	ENSPLAG00000018873	-	99	41.737	Poecilia_latipinna
ENSMZEG00005009488	-	99	42.500	ENSPMEG00000002270	-	99	42.297	Poecilia_mexicana
ENSMZEG00005009488	-	99	40.900	ENSPREG00000003140	-	99	39.754	Poecilia_reticulata
ENSMZEG00005009488	-	92	33.540	ENSPPYG00000009494	SNAPC2	98	33.918	Pongo_abelii
ENSMZEG00005009488	-	98	31.805	ENSPCOG00000026672	SNAPC2	96	35.484	Propithecus_coquereli
ENSMZEG00005009488	-	85	33.714	ENSPNAG00000020947	snapc2	99	31.969	Pygocentrus_nattereri
ENSMZEG00005009488	-	58	34.641	ENSRNOG00000001056	Snapc2	70	32.903	Rattus_norvegicus
ENSMZEG00005009488	-	92	32.219	ENSRBIG00000044314	SNAPC2	98	32.849	Rhinopithecus_bieti
ENSMZEG00005009488	-	92	32.219	ENSRROG00000043480	SNAPC2	98	32.849	Rhinopithecus_roxellana
ENSMZEG00005009488	-	92	33.951	ENSSBOG00000011587	SNAPC2	98	33.721	Saimiri_boliviensis_boliviensis
ENSMZEG00005009488	-	62	34.706	ENSSHAG00000009002	-	79	32.934	Sarcophilus_harrisii
ENSMZEG00005009488	-	99	44.946	ENSSMAG00000009095	-	78	77.419	Scophthalmus_maximus
ENSMZEG00005009488	-	99	49.053	ENSSDUG00000016949	-	100	46.377	Seriola_dumerili
ENSMZEG00005009488	-	50	50.216	ENSSLDG00000006093	-	73	49.787	Seriola_lalandi_dorsalis
ENSMZEG00005009488	-	69	30.894	ENSSARG00000012954	SNAPC2	71	31.048	Sorex_araneus
ENSMZEG00005009488	-	87	45.778	ENSSPAG00000008637	-	97	45.662	Stegastes_partitus
ENSMZEG00005009488	-	90	30.091	ENSSSCG00000013589	SNAPC2	92	30.091	Sus_scrofa
ENSMZEG00005009488	-	60	58.000	ENSTRUG00000005122	-	94	58.000	Takifugu_rubripes
ENSMZEG00005009488	-	92	31.193	ENSTTRG00000010165	SNAPC2	93	31.193	Tursiops_truncatus
ENSMZEG00005009488	-	92	30.247	ENSUAMG00000021489	SNAPC2	93	30.247	Ursus_americanus
ENSMZEG00005009488	-	98	31.579	ENSVVUG00000026998	SNAPC2	98	31.579	Vulpes_vulpes
ENSMZEG00005009488	-	99	41.176	ENSXMAG00000027683	-	80	41.527	Xiphophorus_maculatus