EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005010421 (Gene tree)
Gene ID: 101463718
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: CXXC-type zinc finger protein 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 12849 bases
Position: chrLG5:8242889-8255737
Accession: 101463718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005013831	MBD	PF01429.19	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005014300	-	5632	XM_004571918	ENSMZEP00005013831	839 (aa)	XP_004571975	UPI00032A230A

Gene Model

Click here to download ENSMZEG00005010421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005010421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005010421	mbd1b	99	74.852	ENSAPOG00000012810	mbd1b	99	74.852	Acanthochromis_polyacanthus
ENSMZEG00005010421	mbd1b	99	68.772	ENSACIG00000010590	mbd1b	99	69.006	Amphilophus_citrinellus
ENSMZEG00005010421	mbd1b	100	76.540	ENSAOCG00000020272	mbd1b	99	76.540	Amphiprion_ocellaris
ENSMZEG00005010421	mbd1b	100	76.659	ENSAPEG00000023230	mbd1b	99	76.659	Amphiprion_percula
ENSMZEG00005010421	mbd1b	96	75.122	ENSATEG00000009608	mbd1b	98	75.366	Anabas_testudineus
ENSMZEG00005010421	mbd1b	100	99.881	ENSACLG00000021383	mbd1b	100	99.881	Astatotilapia_calliptera
ENSMZEG00005010421	mbd1b	50	37.129	ENSBTAG00000003801	MBD1	60	36.782	Bos_taurus
ENSMZEG00005010421	mbd1b	50	37.129	ENSCHIG00000021134	MBD1	59	36.364	Capra_hircus
ENSMZEG00005010421	mbd1b	90	62.203	ENSCSEG00000009082	mbd1b	94	61.952	Cynoglossus_semilaevis
ENSMZEG00005010421	mbd1b	99	63.389	ENSCVAG00000001167	mbd1b	99	63.133	Cyprinodon_variegatus
ENSMZEG00005010421	mbd1b	91	37.178	ENSDARG00000025699	mbd1b	90	35.216	Danio_rerio
ENSMZEG00005010421	mbd1b	99	45.077	ENSELUG00000004375	mbd1b	99	43.791	Esox_lucius
ENSMZEG00005010421	mbd1b	50	34.649	ENSFCAG00000015730	MBD1	60	33.251	Felis_catus
ENSMZEG00005010421	mbd1b	95	65.163	ENSFHEG00000020120	mbd1b	96	64.912	Fundulus_heteroclitus
ENSMZEG00005010421	mbd1b	89	65.333	ENSGAFG00000008975	mbd1b	90	66.312	Gambusia_affinis
ENSMZEG00005010421	mbd1b	78	56.406	ENSGACG00000012106	-	99	56.029	Gasterosteus_aculeatus
ENSMZEG00005010421	mbd1b	100	99.523	ENSHBUG00000014270	mbd1b	100	99.523	Haplochromis_burtoni
ENSMZEG00005010421	mbd1b	99	55.781	ENSHCOG00000009952	mbd1b	99	55.900	Hippocampus_comes
ENSMZEG00005010421	mbd1b	90	38.738	ENSIPUG00000015243	-	94	37.500	Ictalurus_punctatus
ENSMZEG00005010421	mbd1b	96	65.116	ENSKMAG00000020760	mbd1b	97	65.890	Kryptolebias_marmoratus
ENSMZEG00005010421	mbd1b	80	70.162	ENSMAMG00000023341	-	95	70.552	Mastacembelus_armatus
ENSMZEG00005010421	mbd1b	92	93.750	ENSMMOG00000011607	mbd1b	83	93.750	Mola_mola
ENSMZEG00005010421	mbd1b	96	75.366	ENSMALG00000007808	mbd1b	98	75.244	Monopterus_albus
ENSMZEG00005010421	mbd1b	100	96.782	ENSONIG00000020289	mbd1b	99	96.782	Oreochromis_niloticus
ENSMZEG00005010421	mbd1b	99	66.393	ENSORLG00000029390	mbd1b	99	66.393	Oryzias_latipes
ENSMZEG00005010421	mbd1b	99	66.042	ENSORLG00020000575	mbd1b	99	66.159	Oryzias_latipes_hni
ENSMZEG00005010421	mbd1b	99	66.199	ENSORLG00015014812	mbd1b	99	66.199	Oryzias_latipes_hsok
ENSMZEG00005010421	mbd1b	99	64.918	ENSOMEG00000023660	mbd1b	99	64.802	Oryzias_melastigma
ENSMZEG00005010421	mbd1b	50	34.649	ENSPPRG00000021387	MBD1	66	36.782	Panthera_pardus
ENSMZEG00005010421	mbd1b	50	34.649	ENSPTIG00000021231	MBD1	59	36.782	Panthera_tigris_altaica
ENSMZEG00005010421	mbd1b	63	35.862	ENSPCIG00000027937	-	56	61.017	Phascolarctos_cinereus
ENSMZEG00005010421	mbd1b	98	61.772	ENSPFOG00000007511	mbd1b	99	62.424	Poecilia_formosa
ENSMZEG00005010421	mbd1b	98	61.650	ENSPLAG00000021258	mbd1b	99	62.379	Poecilia_latipinna
ENSMZEG00005010421	mbd1b	89	64.753	ENSPMEG00000024145	mbd1b	99	62.500	Poecilia_mexicana
ENSMZEG00005010421	mbd1b	89	65.154	ENSPREG00000021805	mbd1b	99	62.303	Poecilia_reticulata
ENSMZEG00005010421	mbd1b	89	39.529	ENSPNAG00000018075	mbd1b	92	38.529	Pygocentrus_nattereri
ENSMZEG00005010421	mbd1b	100	33.931	ENSSFOG00015008591	-	80	53.797	Scleropages_formosus
ENSMZEG00005010421	mbd1b	93	72.784	ENSSMAG00000014640	mbd1b	82	74.219	Scophthalmus_maximus
ENSMZEG00005010421	mbd1b	90	80.236	ENSSDUG00000012996	mbd1b	99	72.492	Seriola_dumerili
ENSMZEG00005010421	mbd1b	86	60.944	ENSSLDG00000012422	mbd1b	95	86.452	Seriola_lalandi_dorsalis
ENSMZEG00005010421	mbd1b	100	78.410	ENSSPAG00000021447	mbd1b	99	78.529	Stegastes_partitus
ENSMZEG00005010421	mbd1b	96	64.851	ENSTRUG00000013422	mbd1b	98	64.851	Takifugu_rubripes
ENSMZEG00005010421	mbd1b	62	66.667	ENSTNIG00000007326	-	73	66.667	Tetraodon_nigroviridis
ENSMZEG00005010421	mbd1b	50	33.831	ENSUAMG00000004752	MBD1	58	34.302	Ursus_americanus
ENSMZEG00005010421	mbd1b	50	37.931	ENSUMAG00000002947	MBD1	59	36.364	Ursus_maritimus
ENSMZEG00005010421	mbd1b	99	61.520	ENSXMAG00000005628	mbd1b	99	61.922	Xiphophorus_maculatus