EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005010646 (Gene tree)
Gene ID: 101479717
Gene Symbol: chd7
Alias: si:ch211-197o6.2|wu:cegs2051|wu:fb37f10|wu:fb39h04|wu:fd19h06
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 76989 bases
Position: chrLG18:22453731-22530719
Accession: 101479717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014134	ResIII	PF04851.15	9.7e-06	1	1
ENSMZEP00005014134	BRK	PF07533.16	2.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005014610	-	13051	XM_004573985	ENSMZEP00005014134	3316 (aa)	XP_004574042	UPI000D32401A

Gene Model

Click here to download ENSMZEG00005010646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005010646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005010646	chd7	84	80.417	ENSG00000171316	CHD7	97	64.516	Homo_sapiens
ENSMZEG00005010646	chd7	77	88.726	ENSAPOG00000009351	chd7	98	84.258	Acanthochromis_polyacanthus
ENSMZEG00005010646	chd7	83	80.417	ENSAMEG00000005699	CHD7	71	80.257	Ailuropoda_melanoleuca
ENSMZEG00005010646	chd7	56	67.295	ENSAMEG00000006307	CHD8	61	69.261	Ailuropoda_melanoleuca
ENSMZEG00005010646	chd7	71	82.189	ENSACIG00000001590	chd7	99	82.189	Amphilophus_citrinellus
ENSMZEG00005010646	chd7	72	88.930	ENSAOCG00000002337	chd7	100	88.053	Amphiprion_ocellaris
ENSMZEG00005010646	chd7	98	86.695	ENSAPEG00000010332	chd7	77	88.176	Amphiprion_percula
ENSMZEG00005010646	chd7	70	87.946	ENSATEG00000002590	chd7	98	88.651	Anabas_testudineus
ENSMZEG00005010646	chd7	61	80.096	ENSACAG00000005760	CHD7	71	79.856	Anolis_carolinensis
ENSMZEG00005010646	chd7	85	80.417	ENSANAG00000035300	CHD7	70	80.257	Aotus_nancymaae
ENSMZEG00005010646	chd7	75	68.728	ENSAMXG00000006180	chd7	94	69.215	Astyanax_mexicanus
ENSMZEG00005010646	chd7	68	80.337	ENSBTAG00000021841	CHD7	76	80.337	Bos_taurus
ENSMZEG00005010646	chd7	85	80.417	ENSCJAG00000009025	CHD7	71	80.257	Callithrix_jacchus
ENSMZEG00005010646	chd7	51	67.295	ENSCAFG00000005626	CHD8	73	69.427	Canis_familiaris
ENSMZEG00005010646	chd7	89	80.337	ENSCAFG00000007167	CHD7	70	80.177	Canis_familiaris
ENSMZEG00005010646	chd7	89	79.421	ENSCAFG00020015856	CHD7	70	79.180	Canis_lupus_dingo
ENSMZEG00005010646	chd7	50	70.820	ENSCAFG00020014565	CHD8	81	73.942	Canis_lupus_dingo
ENSMZEG00005010646	chd7	87	78.848	ENSCHIG00000011729	CHD7	70	80.417	Capra_hircus
ENSMZEG00005010646	chd7	85	80.177	ENSTSYG00000004018	CHD7	71	80.016	Carlito_syrichta
ENSMZEG00005010646	chd7	51	67.042	ENSTSYG00000011939	CHD8	62	68.908	Carlito_syrichta
ENSMZEG00005010646	chd7	89	75.361	ENSCAPG00000007952	CHD7	70	75.120	Cavia_aperea
ENSMZEG00005010646	chd7	52	51.650	ENSCPOG00000013385	CHD7	71	80.417	Cavia_porcellus
ENSMZEG00005010646	chd7	85	80.417	ENSCATG00000020229	CHD7	74	80.257	Cercocebus_atys
ENSMZEG00005010646	chd7	86	80.257	ENSCLAG00000004679	CHD7	71	80.096	Chinchilla_lanigera
ENSMZEG00005010646	chd7	85	80.337	ENSCSAG00000014349	CHD7	74	80.177	Chlorocebus_sabaeus
ENSMZEG00005010646	chd7	50	81.335	ENSCHOG00000008478	CHD7	77	80.366	Choloepus_hoffmanni
ENSMZEG00005010646	chd7	79	81.793	ENSCPBG00000021517	CHD7	95	80.838	Chrysemys_picta_bellii
ENSMZEG00005010646	chd7	85	80.257	ENSCANG00000041382	CHD7	71	80.096	Colobus_angolensis_palliatus
ENSMZEG00005010646	chd7	51	67.523	ENSCGRG00001014351	Chd8	62	69.506	Cricetulus_griseus_chok1gshd
ENSMZEG00005010646	chd7	87	80.337	ENSCGRG00001011949	Chd7	71	80.177	Cricetulus_griseus_chok1gshd
ENSMZEG00005010646	chd7	51	67.523	ENSCGRG00000009710	Chd8	65	69.506	Cricetulus_griseus_crigri
ENSMZEG00005010646	chd7	90	63.333	ENSCGRG00000000481	Chd7	67	75.281	Cricetulus_griseus_crigri
ENSMZEG00005010646	chd7	71	84.554	ENSCSEG00000017886	chd7	99	84.580	Cynoglossus_semilaevis
ENSMZEG00005010646	chd7	98	82.758	ENSCVAG00000017584	chd7	99	82.824	Cyprinodon_variegatus
ENSMZEG00005010646	chd7	77	69.411	ENSDARG00000075211	chd7	95	70.188	Danio_rerio
ENSMZEG00005010646	chd7	68	80.658	ENSDNOG00000011674	CHD7	71	80.498	Dasypus_novemcinctus
ENSMZEG00005010646	chd7	86	80.177	ENSDORG00000003515	Chd7	71	80.016	Dipodomys_ordii
ENSMZEG00005010646	chd7	53	77.656	ENSETEG00000016689	-	56	78.006	Echinops_telfairi
ENSMZEG00005010646	chd7	56	65.241	ENSEBUG00000007607	chd8	64	70.777	Eptatretus_burgeri
ENSMZEG00005010646	chd7	87	80.674	ENSEASG00005016258	CHD7	71	80.513	Equus_asinus_asinus
ENSMZEG00005010646	chd7	87	80.674	ENSECAG00000001445	CHD7	87	80.513	Equus_caballus
ENSMZEG00005010646	chd7	51	62.933	ENSECAG00000016102	CHD8	62	69.347	Equus_caballus
ENSMZEG00005010646	chd7	82	84.349	ENSEEUG00000013559	CHD7	75	78.947	Erinaceus_europaeus
ENSMZEG00005010646	chd7	82	80.246	ENSELUG00000024442	chd7	90	80.861	Esox_lucius
ENSMZEG00005010646	chd7	87	80.529	ENSFCAG00000003849	CHD7	71	80.369	Felis_catus
ENSMZEG00005010646	chd7	62	80.498	ENSFALG00000005570	CHD7	71	80.337	Ficedula_albicollis
ENSMZEG00005010646	chd7	86	80.500	ENSFDAG00000000528	CHD7	71	79.936	Fukomys_damarensis
ENSMZEG00005010646	chd7	100	81.701	ENSFHEG00000001311	chd7	99	81.813	Fundulus_heteroclitus
ENSMZEG00005010646	chd7	56	86.550	ENSGMOG00000004232	chd7	94	87.131	Gadus_morhua
ENSMZEG00005010646	chd7	80	83.550	ENSGAFG00000006858	chd7	90	86.118	Gambusia_affinis
ENSMZEG00005010646	chd7	66	86.671	ENSGACG00000014897	chd7	99	74.637	Gasterosteus_aculeatus
ENSMZEG00005010646	chd7	75	81.622	ENSGAGG00000017996	CHD7	92	80.769	Gopherus_agassizii
ENSMZEG00005010646	chd7	84	80.498	ENSGGOG00000012224	CHD7	70	80.337	Gorilla_gorilla
ENSMZEG00005010646	chd7	100	99.638	ENSHBUG00000019225	chd7	100	99.638	Haplochromis_burtoni
ENSMZEG00005010646	chd7	67	80.419	ENSHGLG00000017268	CHD7	71	80.258	Heterocephalus_glaber_female
ENSMZEG00005010646	chd7	67	80.419	ENSHGLG00100015649	CHD7	74	80.258	Heterocephalus_glaber_male
ENSMZEG00005010646	chd7	99	77.288	ENSHCOG00000014380	chd7	99	80.268	Hippocampus_comes
ENSMZEG00005010646	chd7	65	78.125	ENSIPUG00000007585	chd7	90	74.398	Ictalurus_punctatus
ENSMZEG00005010646	chd7	56	67.447	ENSSTOG00000001854	CHD8	62	69.427	Ictidomys_tridecemlineatus
ENSMZEG00005010646	chd7	86	80.578	ENSSTOG00000011949	CHD7	71	80.417	Ictidomys_tridecemlineatus
ENSMZEG00005010646	chd7	98	84.496	ENSKMAG00000009724	chd7	99	83.834	Kryptolebias_marmoratus
ENSMZEG00005010646	chd7	100	81.970	ENSLBEG00000020842	chd7	77	84.946	Labrus_bergylta
ENSMZEG00005010646	chd7	81	81.255	ENSLACG00000002461	CHD7	74	73.574	Latimeria_chalumnae
ENSMZEG00005010646	chd7	61	82.292	ENSLOCG00000005062	chd7	88	75.532	Lepisosteus_oculatus
ENSMZEG00005010646	chd7	85	80.417	ENSMFAG00000041825	CHD7	84	80.257	Macaca_fascicularis
ENSMZEG00005010646	chd7	85	80.417	ENSMMUG00000011584	CHD7	71	80.257	Macaca_mulatta
ENSMZEG00005010646	chd7	85	80.417	ENSMNEG00000040978	CHD7	74	80.257	Macaca_nemestrina
ENSMZEG00005010646	chd7	85	80.417	ENSMLEG00000038817	CHD7	74	80.257	Mandrillus_leucophaeus
ENSMZEG00005010646	chd7	100	82.046	ENSMAMG00000011569	chd7	100	82.171	Mastacembelus_armatus
ENSMZEG00005010646	chd7	83	82.616	ENSMAUG00000001000	Chd7	69	82.616	Mesocricetus_auratus
ENSMZEG00005010646	chd7	85	80.498	ENSMICG00000002430	CHD7	71	80.337	Microcebus_murinus
ENSMZEG00005010646	chd7	60	67.523	ENSMICG00000007735	CHD8	69	69.427	Microcebus_murinus
ENSMZEG00005010646	chd7	51	66.591	ENSMMOG00000021538	-	88	82.589	Mola_mola
ENSMZEG00005010646	chd7	51	67.296	ENSMODG00000006219	CHD8	67	69.347	Monodelphis_domestica
ENSMZEG00005010646	chd7	74	85.127	ENSMALG00000004389	chd7	99	84.637	Monopterus_albus
ENSMZEG00005010646	chd7	51	67.372	MGP_CAROLIEiJ_G0019237	Chd8	69	69.347	Mus_caroli
ENSMZEG00005010646	chd7	83	80.177	MGP_CAROLIEiJ_G0025797	Chd7	71	80.016	Mus_caroli
ENSMZEG00005010646	chd7	66	80.337	ENSMUSG00000041235	Chd7	70	80.177	Mus_musculus
ENSMZEG00005010646	chd7	51	67.447	ENSMUSG00000053754	Chd8	80	63.355	Mus_musculus
ENSMZEG00005010646	chd7	71	80.257	MGP_PahariEiJ_G0023920	Chd7	71	80.096	Mus_pahari
ENSMZEG00005010646	chd7	68	80.257	MGP_SPRETEiJ_G0026745	Chd7	71	80.096	Mus_spretus
ENSMZEG00005010646	chd7	57	80.337	ENSMPUG00000002338	CHD7	75	80.177	Mustela_putorius_furo
ENSMZEG00005010646	chd7	84	78.760	ENSMLUG00000015266	CHD7	70	77.867	Myotis_lucifugus
ENSMZEG00005010646	chd7	56	67.447	ENSMLUG00000001878	CHD8	62	69.427	Myotis_lucifugus
ENSMZEG00005010646	chd7	89	71.078	ENSNGAG00000010767	Chd7	71	80.177	Nannospalax_galili
ENSMZEG00005010646	chd7	76	96.216	ENSNBRG00000001280	chd7	68	96.216	Neolamprologus_brichardi
ENSMZEG00005010646	chd7	84	80.417	ENSNLEG00000002027	CHD7	70	80.257	Nomascus_leucogenys
ENSMZEG00005010646	chd7	73	74.614	ENSMEUG00000010045	CHD7	78	74.194	Notamacropus_eugenii
ENSMZEG00005010646	chd7	55	62.236	ENSMEUG00000011732	CHD8	66	63.723	Notamacropus_eugenii
ENSMZEG00005010646	chd7	51	64.324	ENSOPRG00000016120	CHD8	73	65.976	Ochotona_princeps
ENSMZEG00005010646	chd7	97	87.600	ENSONIG00000016614	chd7	100	88.126	Oreochromis_niloticus
ENSMZEG00005010646	chd7	68	80.738	ENSOCUG00000010034	CHD7	87	80.578	Oryctolagus_cuniculus
ENSMZEG00005010646	chd7	99	81.876	ENSORLG00000013492	chd7	77	83.068	Oryzias_latipes
ENSMZEG00005010646	chd7	99	81.731	ENSORLG00020020002	chd7	77	82.997	Oryzias_latipes_hni
ENSMZEG00005010646	chd7	99	81.703	ENSORLG00015020858	chd7	75	83.742	Oryzias_latipes_hsok
ENSMZEG00005010646	chd7	99	82.098	ENSOMEG00000016881	chd7	77	83.958	Oryzias_melastigma
ENSMZEG00005010646	chd7	85	80.578	ENSOGAG00000013905	CHD7	74	80.417	Otolemur_garnettii
ENSMZEG00005010646	chd7	67	75.553	ENSOARG00000016176	CHD7	70	80.337	Ovis_aries
ENSMZEG00005010646	chd7	84	80.417	ENSPPAG00000033330	CHD7	70	80.257	Pan_paniscus
ENSMZEG00005010646	chd7	88	80.593	ENSPPRG00000022248	CHD7	70	80.433	Panthera_pardus
ENSMZEG00005010646	chd7	84	79.487	ENSPTIG00000011702	CHD7	70	79.327	Panthera_tigris_altaica
ENSMZEG00005010646	chd7	84	80.417	ENSPTRG00000020286	CHD7	70	80.257	Pan_troglodytes
ENSMZEG00005010646	chd7	85	80.417	ENSPANG00000018419	CHD7	74	80.257	Papio_anubis
ENSMZEG00005010646	chd7	73	84.930	ENSPMGG00000018543	chd7	94	87.383	Periophthalmus_magnuspinnatus
ENSMZEG00005010646	chd7	51	67.523	ENSPEMG00000022977	Chd8	62	70.049	Peromyscus_maniculatus_bairdii
ENSMZEG00005010646	chd7	69	82.216	ENSPCIG00000000025	-	94	82.216	Phascolarctos_cinereus
ENSMZEG00005010646	chd7	51	66.994	ENSPCIG00000020931	CHD8	72	71.275	Phascolarctos_cinereus
ENSMZEG00005010646	chd7	99	82.824	ENSPFOG00000004891	chd7	92	98.701	Poecilia_formosa
ENSMZEG00005010646	chd7	58	64.518	ENSPFOG00000010939	-	82	64.993	Poecilia_formosa
ENSMZEG00005010646	chd7	99	82.678	ENSPLAG00000023322	chd7	99	82.672	Poecilia_latipinna
ENSMZEG00005010646	chd7	77	75.572	ENSPMEG00000005879	chd7	96	88.948	Poecilia_mexicana
ENSMZEG00005010646	chd7	56	94.075	ENSPREG00000014744	chd7	96	79.070	Poecilia_reticulata
ENSMZEG00005010646	chd7	84	80.417	ENSPPYG00000018618	CHD7	70	80.257	Pongo_abelii
ENSMZEG00005010646	chd7	67	75.233	ENSPCAG00000000227	CHD7	69	75.522	Procavia_capensis
ENSMZEG00005010646	chd7	56	66.868	ENSPCOG00000014628	CHD8	62	68.750	Propithecus_coquereli
ENSMZEG00005010646	chd7	85	80.096	ENSPCOG00000013850	CHD7	71	79.936	Propithecus_coquereli
ENSMZEG00005010646	chd7	84	83.080	ENSPVAG00000011873	CHD7	80	83.080	Pteropus_vampyrus
ENSMZEG00005010646	chd7	74	96.237	ENSPNYG00000012490	chd7	99	94.624	Pundamilia_nyererei
ENSMZEG00005010646	chd7	64	78.467	ENSPNAG00000011245	chd7	94	78.832	Pygocentrus_nattereri
ENSMZEG00005010646	chd7	53	67.572	ENSRNOG00000025011	Chd8	63	69.555	Rattus_norvegicus
ENSMZEG00005010646	chd7	90	64.876	ENSRNOG00000006689	Chd7	71	80.593	Rattus_norvegicus
ENSMZEG00005010646	chd7	85	79.518	ENSRBIG00000043575	CHD7	74	79.357	Rhinopithecus_bieti
ENSMZEG00005010646	chd7	85	80.433	ENSRROG00000008981	CHD7	74	80.273	Rhinopithecus_roxellana
ENSMZEG00005010646	chd7	85	80.417	ENSSBOG00000021462	CHD7	71	80.257	Saimiri_boliviensis_boliviensis
ENSMZEG00005010646	chd7	50	67.296	ENSSHAG00000008118	CHD8	63	69.133	Sarcophilus_harrisii
ENSMZEG00005010646	chd7	81	65.181	ENSSFOG00015015077	chd7	97	77.966	Scleropages_formosus
ENSMZEG00005010646	chd7	52	80.299	ENSSMAG00000001030	chd7	97	74.749	Scophthalmus_maximus
ENSMZEG00005010646	chd7	50	65.796	ENSSMAG00000001453	-	61	69.990	Scophthalmus_maximus
ENSMZEG00005010646	chd7	100	83.398	ENSSDUG00000013773	chd7	100	84.005	Seriola_dumerili
ENSMZEG00005010646	chd7	50	94.737	ENSSLDG00000022595	chd7	93	95.294	Seriola_lalandi_dorsalis
ENSMZEG00005010646	chd7	61	80.250	ENSSARG00000003387	CHD7	66	83.198	Sorex_araneus
ENSMZEG00005010646	chd7	78	78.707	ENSSPUG00000009235	CHD7	92	78.309	Sphenodon_punctatus
ENSMZEG00005010646	chd7	76	89.353	ENSSPAG00000006320	chd7	99	88.885	Stegastes_partitus
ENSMZEG00005010646	chd7	87	79.213	ENSSSCG00000006231	CHD7	72	80.257	Sus_scrofa
ENSMZEG00005010646	chd7	61	80.498	ENSTGUG00000011196	CHD7	71	80.337	Taeniopygia_guttata
ENSMZEG00005010646	chd7	67	80.526	ENSTRUG00000008632	chd7	100	79.134	Takifugu_rubripes
ENSMZEG00005010646	chd7	68	91.842	ENSTNIG00000002647	chd7	96	82.680	Tetraodon_nigroviridis
ENSMZEG00005010646	chd7	83	79.260	ENSUAMG00000025734	CHD7	95	76.866	Ursus_americanus
ENSMZEG00005010646	chd7	81	79.213	ENSUMAG00000010436	CHD7	92	75.914	Ursus_maritimus
ENSMZEG00005010646	chd7	56	67.447	ENSUMAG00000004045	CHD8	71	73.529	Ursus_maritimus
ENSMZEG00005010646	chd7	51	67.447	ENSVVUG00000009444	CHD8	65	69.427	Vulpes_vulpes
ENSMZEG00005010646	chd7	85	80.337	ENSVVUG00000018063	CHD7	70	80.177	Vulpes_vulpes
ENSMZEG00005010646	chd7	93	63.190	ENSXETG00000026004	chd8	73	73.768	Xenopus_tropicalis
ENSMZEG00005010646	chd7	100	81.761	ENSXMAG00000018590	chd7	76	85.419	Xiphophorus_maculatus