EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005010682 (Gene tree)
Gene ID: 101481946
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 64732 bases
Position: chrLG23:5244840-5309571
Accession: 101481946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014194	ResIII	PF04851.15	6.4e-07	1	1
ENSMZEP00005014173	ResIII	PF04851.15	7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005014670	-	8217	XM_014413011	ENSMZEP00005014194	1551 (aa)	XP_014268497	UPI0006461BC3
ENSMZET00005014649	-	8301	XM_004554877	ENSMZEP00005014173	1579 (aa)	XP_004554934	UPI000646B4C4

Gene Model

Click here to download ENSMZEG00005010682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005010682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005010682	si:ch73-63e15.2	77	64.668	ENSG00000064932	SBNO2	87	68.636	Homo_sapiens
ENSMZEG00005010682	si:ch73-63e15.2	100	82.203	ENSAPOG00000003185	si:ch73-63e15.2	100	82.027	Acanthochromis_polyacanthus
ENSMZEG00005010682	si:ch73-63e15.2	100	82.067	ENSAOCG00000016581	si:ch73-63e15.2	99	83.333	Amphiprion_ocellaris
ENSMZEG00005010682	si:ch73-63e15.2	100	81.943	ENSAPEG00000008862	si:ch73-63e15.2	99	83.200	Amphiprion_percula
ENSMZEG00005010682	si:ch73-63e15.2	100	77.360	ENSATEG00000023838	si:ch73-63e15.2	99	84.314	Anabas_testudineus
ENSMZEG00005010682	si:ch73-63e15.2	72	71.367	ENSAPLG00000007158	SBNO2	90	71.109	Anas_platyrhynchos
ENSMZEG00005010682	si:ch73-63e15.2	78	65.072	ENSANAG00000026685	SBNO2	88	68.462	Aotus_nancymaae
ENSMZEG00005010682	si:ch73-63e15.2	100	99.871	ENSACLG00000005090	si:ch73-63e15.2	100	99.871	Astatotilapia_calliptera
ENSMZEG00005010682	si:ch73-63e15.2	87	71.633	ENSAMXG00000015881	si:ch73-63e15.2	95	72.460	Astyanax_mexicanus
ENSMZEG00005010682	si:ch73-63e15.2	80	76.000	ENSAMXG00000018868	sbno2a	96	79.442	Astyanax_mexicanus
ENSMZEG00005010682	si:ch73-63e15.2	78	65.449	ENSBTAG00000020780	SBNO2	89	68.251	Bos_taurus
ENSMZEG00005010682	si:ch73-63e15.2	72	69.697	ENSCAFG00000019543	SBNO2	90	65.600	Canis_familiaris
ENSMZEG00005010682	si:ch73-63e15.2	72	69.697	ENSCAFG00020017115	SBNO2	95	65.354	Canis_lupus_dingo
ENSMZEG00005010682	si:ch73-63e15.2	78	65.324	ENSCHIG00000026127	SBNO2	86	69.211	Capra_hircus
ENSMZEG00005010682	si:ch73-63e15.2	71	66.871	ENSCAPG00000005731	SBNO2	94	66.638	Cavia_aperea
ENSMZEG00005010682	si:ch73-63e15.2	72	66.609	ENSCPOG00000007477	SBNO2	86	66.552	Cavia_porcellus
ENSMZEG00005010682	si:ch73-63e15.2	72	68.221	ENSCCAG00000037518	SBNO2	89	68.076	Cebus_capucinus
ENSMZEG00005010682	si:ch73-63e15.2	77	64.936	ENSCATG00000037046	SBNO2	87	68.810	Cercocebus_atys
ENSMZEG00005010682	si:ch73-63e15.2	72	68.115	ENSCLAG00000010178	SBNO2	98	69.062	Chinchilla_lanigera
ENSMZEG00005010682	si:ch73-63e15.2	72	68.658	ENSCSAG00000012317	SBNO2	84	68.398	Chlorocebus_sabaeus
ENSMZEG00005010682	si:ch73-63e15.2	72	70.665	ENSCPBG00000008920	SBNO2	80	82.432	Chrysemys_picta_bellii
ENSMZEG00005010682	si:ch73-63e15.2	74	64.589	ENSCANG00000036745	SBNO2	95	68.603	Colobus_angolensis_palliatus
ENSMZEG00005010682	si:ch73-63e15.2	71	66.784	ENSCGRG00001023960	Sbno2	89	64.740	Cricetulus_griseus_chok1gshd
ENSMZEG00005010682	si:ch73-63e15.2	71	68.827	ENSCGRG00000011984	Sbno2	89	66.172	Cricetulus_griseus_crigri
ENSMZEG00005010682	si:ch73-63e15.2	75	83.151	ENSCSEG00000006856	si:ch73-63e15.2	96	86.347	Cynoglossus_semilaevis
ENSMZEG00005010682	si:ch73-63e15.2	100	76.904	ENSCVAG00000005663	si:ch73-63e15.2	100	77.143	Cyprinodon_variegatus
ENSMZEG00005010682	si:ch73-63e15.2	88	71.023	ENSDARG00000016188	SBNO2	91	73.866	Danio_rerio
ENSMZEG00005010682	si:ch73-63e15.2	81	74.114	ENSDARG00000098801	sbno2a	94	74.499	Danio_rerio
ENSMZEG00005010682	si:ch73-63e15.2	72	69.297	ENSDORG00000002916	Sbno2	85	69.124	Dipodomys_ordii
ENSMZEG00005010682	si:ch73-63e15.2	78	65.394	ENSEASG00005021621	SBNO2	88	69.217	Equus_asinus_asinus
ENSMZEG00005010682	si:ch73-63e15.2	78	65.076	ENSECAG00000011827	SBNO2	88	69.304	Equus_caballus
ENSMZEG00005010682	si:ch73-63e15.2	100	72.442	ENSELUG00000020457	si:ch73-63e15.2	100	72.125	Esox_lucius
ENSMZEG00005010682	si:ch73-63e15.2	79	67.111	ENSFALG00000013988	SBNO2	90	66.980	Ficedula_albicollis
ENSMZEG00005010682	si:ch73-63e15.2	70	66.844	ENSFDAG00000015186	SBNO2	86	67.197	Fukomys_damarensis
ENSMZEG00005010682	si:ch73-63e15.2	100	77.150	ENSFHEG00000022262	si:ch73-63e15.2	100	77.150	Fundulus_heteroclitus
ENSMZEG00005010682	si:ch73-63e15.2	72	86.572	ENSGMOG00000007542	si:ch73-63e15.2	95	86.572	Gadus_morhua
ENSMZEG00005010682	si:ch73-63e15.2	79	67.287	ENSGALG00000037522	SBNO2	84	71.625	Gallus_gallus
ENSMZEG00005010682	si:ch73-63e15.2	79	86.737	ENSGAFG00000004860	si:ch73-63e15.2	93	86.737	Gambusia_affinis
ENSMZEG00005010682	si:ch73-63e15.2	72	87.554	ENSGACG00000013190	si:ch73-63e15.2	96	86.856	Gasterosteus_aculeatus
ENSMZEG00005010682	si:ch73-63e15.2	82	66.140	ENSGAGG00000008348	SBNO2	99	64.728	Gopherus_agassizii
ENSMZEG00005010682	si:ch73-63e15.2	100	99.430	ENSHBUG00000010742	si:ch73-63e15.2	100	99.467	Haplochromis_burtoni
ENSMZEG00005010682	si:ch73-63e15.2	72	68.544	ENSHGLG00000008739	SBNO2	85	68.394	Heterocephalus_glaber_female
ENSMZEG00005010682	si:ch73-63e15.2	72	67.907	ENSHGLG00100005269	SBNO2	98	68.848	Heterocephalus_glaber_male
ENSMZEG00005010682	si:ch73-63e15.2	81	80.900	ENSHCOG00000000884	si:ch73-63e15.2	95	80.000	Hippocampus_comes
ENSMZEG00005010682	si:ch73-63e15.2	99	64.586	ENSIPUG00000019672	sbno2	99	75.749	Ictalurus_punctatus
ENSMZEG00005010682	si:ch73-63e15.2	80	76.550	ENSIPUG00000000537	si:ch73-63e15.2	97	73.736	Ictalurus_punctatus
ENSMZEG00005010682	si:ch73-63e15.2	78	65.440	ENSSTOG00000025832	SBNO2	91	65.468	Ictidomys_tridecemlineatus
ENSMZEG00005010682	si:ch73-63e15.2	78	62.700	ENSJJAG00000017397	Sbno2	91	62.650	Jaculus_jaculus
ENSMZEG00005010682	si:ch73-63e15.2	100	77.241	ENSKMAG00000005541	si:ch73-63e15.2	100	77.690	Kryptolebias_marmoratus
ENSMZEG00005010682	si:ch73-63e15.2	94	77.771	ENSLBEG00000025016	si:ch73-63e15.2	99	86.561	Labrus_bergylta
ENSMZEG00005010682	si:ch73-63e15.2	90	73.077	ENSLOCG00000004643	si:ch73-63e15.2	96	75.000	Lepisosteus_oculatus
ENSMZEG00005010682	si:ch73-63e15.2	72	64.589	ENSLAFG00000008824	SBNO2	89	65.354	Loxodonta_africana
ENSMZEG00005010682	si:ch73-63e15.2	77	63.368	ENSMFAG00000040030	SBNO2	89	67.101	Macaca_fascicularis
ENSMZEG00005010682	si:ch73-63e15.2	77	64.856	ENSMMUG00000010886	SBNO2	88	66.954	Macaca_mulatta
ENSMZEG00005010682	si:ch73-63e15.2	77	64.776	ENSMNEG00000039927	SBNO2	87	68.636	Macaca_nemestrina
ENSMZEG00005010682	si:ch73-63e15.2	71	65.146	ENSMLEG00000038556	SBNO2	98	65.146	Mandrillus_leucophaeus
ENSMZEG00005010682	si:ch73-63e15.2	100	78.769	ENSMAMG00000018758	si:ch73-63e15.2	99	80.105	Mastacembelus_armatus
ENSMZEG00005010682	si:ch73-63e15.2	71	71.750	ENSMGAG00000003801	SBNO2	89	71.490	Meleagris_gallopavo
ENSMZEG00005010682	si:ch73-63e15.2	72	67.670	ENSMAUG00000008034	Sbno2	86	68.213	Mesocricetus_auratus
ENSMZEG00005010682	si:ch73-63e15.2	78	64.884	ENSMICG00000013071	SBNO2	88	68.229	Microcebus_murinus
ENSMZEG00005010682	si:ch73-63e15.2	75	66.749	ENSMOCG00000010504	Sbno2	89	66.502	Microtus_ochrogaster
ENSMZEG00005010682	si:ch73-63e15.2	78	66.745	ENSMODG00000005382	SBNO2	89	66.510	Monodelphis_domestica
ENSMZEG00005010682	si:ch73-63e15.2	62	83.460	ENSMALG00000021831	si:ch73-63e15.2	99	83.460	Monopterus_albus
ENSMZEG00005010682	si:ch73-63e15.2	75	66.474	ENSMUSG00000035673	Sbno2	97	66.500	Mus_musculus
ENSMZEG00005010682	si:ch73-63e15.2	75	66.612	MGP_PahariEiJ_G0030976	Sbno2	89	66.417	Mus_pahari
ENSMZEG00005010682	si:ch73-63e15.2	75	66.612	MGP_SPRETEiJ_G0016381	Sbno2	95	66.417	Mus_spretus
ENSMZEG00005010682	si:ch73-63e15.2	67	66.850	ENSMPUG00000008747	SBNO2	99	66.758	Mustela_putorius_furo
ENSMZEG00005010682	si:ch73-63e15.2	75	66.033	ENSNGAG00000004308	Sbno2	90	65.868	Nannospalax_galili
ENSMZEG00005010682	si:ch73-63e15.2	77	98.319	ENSNBRG00000022968	si:ch73-63e15.2	99	100.000	Neolamprologus_brichardi
ENSMZEG00005010682	si:ch73-63e15.2	73	68.794	ENSNLEG00000001305	SBNO2	89	68.794	Nomascus_leucogenys
ENSMZEG00005010682	si:ch73-63e15.2	60	67.091	ENSMEUG00000013511	-	78	66.773	Notamacropus_eugenii
ENSMZEG00005010682	si:ch73-63e15.2	71	68.198	ENSOPRG00000017238	SBNO2	93	68.844	Ochotona_princeps
ENSMZEG00005010682	si:ch73-63e15.2	72	67.215	ENSODEG00000011822	SBNO2	86	67.097	Octodon_degus
ENSMZEG00005010682	si:ch73-63e15.2	100	97.847	ENSONIG00000002490	si:ch73-63e15.2	100	97.847	Oreochromis_niloticus
ENSMZEG00005010682	si:ch73-63e15.2	100	77.472	ENSORLG00000000913	si:ch73-63e15.2	99	78.391	Oryzias_latipes
ENSMZEG00005010682	si:ch73-63e15.2	100	77.771	ENSORLG00020010978	si:ch73-63e15.2	100	77.646	Oryzias_latipes_hni
ENSMZEG00005010682	si:ch73-63e15.2	100	77.472	ENSORLG00015000202	si:ch73-63e15.2	100	77.646	Oryzias_latipes_hsok
ENSMZEG00005010682	si:ch73-63e15.2	100	77.215	ENSOMEG00000000359	si:ch73-63e15.2	100	77.258	Oryzias_melastigma
ENSMZEG00005010682	si:ch73-63e15.2	72	66.494	ENSOARG00000011130	SBNO2	86	66.494	Ovis_aries
ENSMZEG00005010682	si:ch73-63e15.2	77	63.838	ENSPPAG00000032482	SBNO2	90	67.700	Pan_paniscus
ENSMZEG00005010682	si:ch73-63e15.2	72	68.458	ENSPTRG00000010185	SBNO2	87	68.750	Pan_troglodytes
ENSMZEG00005010682	si:ch73-63e15.2	72	65.281	ENSPANG00000009658	SBNO2	87	65.334	Papio_anubis
ENSMZEG00005010682	si:ch73-63e15.2	90	79.462	ENSPKIG00000024201	si:ch73-63e15.2	83	82.456	Paramormyrops_kingsleyae
ENSMZEG00005010682	si:ch73-63e15.2	65	78.613	ENSPKIG00000009707	-	84	78.732	Paramormyrops_kingsleyae
ENSMZEG00005010682	si:ch73-63e15.2	61	73.374	ENSPSIG00000002852	SBNO2	99	73.171	Pelodiscus_sinensis
ENSMZEG00005010682	si:ch73-63e15.2	81	78.414	ENSPMGG00000014375	si:ch73-63e15.2	95	78.100	Periophthalmus_magnuspinnatus
ENSMZEG00005010682	si:ch73-63e15.2	75	64.730	ENSPEMG00000024122	Sbno2	89	64.232	Peromyscus_maniculatus_bairdii
ENSMZEG00005010682	si:ch73-63e15.2	78	67.528	ENSPCIG00000011264	SBNO2	89	67.205	Phascolarctos_cinereus
ENSMZEG00005010682	si:ch73-63e15.2	100	76.082	ENSPFOG00000004096	si:ch73-63e15.2	100	85.739	Poecilia_formosa
ENSMZEG00005010682	si:ch73-63e15.2	96	76.701	ENSPLAG00000014653	si:ch73-63e15.2	100	76.221	Poecilia_latipinna
ENSMZEG00005010682	si:ch73-63e15.2	100	75.871	ENSPMEG00000002129	si:ch73-63e15.2	96	82.621	Poecilia_mexicana
ENSMZEG00005010682	si:ch73-63e15.2	100	76.084	ENSPREG00000006755	si:ch73-63e15.2	100	76.052	Poecilia_reticulata
ENSMZEG00005010682	si:ch73-63e15.2	67	68.627	ENSPCAG00000012256	SBNO2	79	68.037	Procavia_capensis
ENSMZEG00005010682	si:ch73-63e15.2	78	60.144	ENSPCOG00000015216	SBNO2	90	60.016	Propithecus_coquereli
ENSMZEG00005010682	si:ch73-63e15.2	100	99.810	ENSPNYG00000019926	si:ch73-63e15.2	100	99.810	Pundamilia_nyererei
ENSMZEG00005010682	si:ch73-63e15.2	79	76.172	ENSPNAG00000026609	sbno2a	99	69.261	Pygocentrus_nattereri
ENSMZEG00005010682	si:ch73-63e15.2	83	76.172	ENSPNAG00000020260	si:ch73-63e15.2	89	77.778	Pygocentrus_nattereri
ENSMZEG00005010682	si:ch73-63e15.2	75	66.694	ENSRNOG00000013987	Sbno2	89	68.696	Rattus_norvegicus
ENSMZEG00005010682	si:ch73-63e15.2	66	67.711	ENSRBIG00000009740	SBNO2	86	67.493	Rhinopithecus_bieti
ENSMZEG00005010682	si:ch73-63e15.2	63	71.306	ENSRROG00000044671	SBNO2	85	71.306	Rhinopithecus_roxellana
ENSMZEG00005010682	si:ch73-63e15.2	77	64.555	ENSSBOG00000023562	SBNO2	88	68.028	Saimiri_boliviensis_boliviensis
ENSMZEG00005010682	si:ch73-63e15.2	71	70.757	ENSSHAG00000010241	SBNO2	98	70.496	Sarcophilus_harrisii
ENSMZEG00005010682	si:ch73-63e15.2	87	80.158	ENSSFOG00015005861	si:ch73-63e15.2	94	80.584	Scleropages_formosus
ENSMZEG00005010682	si:ch73-63e15.2	100	78.279	ENSSMAG00000012489	si:ch73-63e15.2	99	80.222	Scophthalmus_maximus
ENSMZEG00005010682	si:ch73-63e15.2	100	80.342	ENSSDUG00000003527	si:ch73-63e15.2	100	80.464	Seriola_dumerili
ENSMZEG00005010682	si:ch73-63e15.2	100	80.220	ENSSLDG00000004623	si:ch73-63e15.2	100	80.342	Seriola_lalandi_dorsalis
ENSMZEG00005010682	si:ch73-63e15.2	94	81.180	ENSSPAG00000017717	si:ch73-63e15.2	100	81.675	Stegastes_partitus
ENSMZEG00005010682	si:ch73-63e15.2	78	65.008	ENSSSCG00000030042	SBNO2	89	69.130	Sus_scrofa
ENSMZEG00005010682	si:ch73-63e15.2	70	87.895	ENSTRUG00000018193	si:ch73-63e15.2	86	88.381	Takifugu_rubripes
ENSMZEG00005010682	si:ch73-63e15.2	66	69.943	ENSUAMG00000006568	SBNO2	93	70.983	Ursus_americanus
ENSMZEG00005010682	si:ch73-63e15.2	72	69.697	ENSVVUG00000022823	SBNO2	82	69.437	Vulpes_vulpes
ENSMZEG00005010682	si:ch73-63e15.2	66	74.899	ENSXETG00000021579	sbno2	91	74.239	Xenopus_tropicalis
ENSMZEG00005010682	si:ch73-63e15.2	83	87.284	ENSXCOG00000009209	si:ch73-63e15.2	94	89.749	Xiphophorus_couchianus
ENSMZEG00005010682	si:ch73-63e15.2	100	76.278	ENSXMAG00000012091	si:ch73-63e15.2	89	88.605	Xiphophorus_maculatus