EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005010787 (Gene tree)
Gene ID: 101473585
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 10948 bases
Position: chrLG12:11621279-11632226
Accession: 101473585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014339	ResIII	PF04851.15	4.8e-26	1	2
ENSMZEP00005014339	ResIII	PF04851.15	4.8e-26	2	2
ENSMZEP00005014339	DEAD	PF00270.29	2.4e-53	1	2
ENSMZEP00005014339	DEAD	PF00270.29	2.4e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005014818	-	5559	XM_023153241	ENSMZEP00005014339	1852 (aa)	XP_023009009	-

Gene Model

Click here to download ENSMZEG00005010787's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005010787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005010787	snrnp200	99	87.827	ENSG00000144028	SNRNP200	97	87.780	Homo_sapiens
ENSMZEG00005010787	snrnp200	99	95.085	ENSAPOG00000010223	snrnp200	97	95.085	Acanthochromis_polyacanthus
ENSMZEG00005010787	snrnp200	99	87.880	ENSAMEG00000008996	SNRNP200	97	87.834	Ailuropoda_melanoleuca
ENSMZEG00005010787	snrnp200	99	95.842	ENSACIG00000001764	snrnp200	98	95.842	Amphilophus_citrinellus
ENSMZEG00005010787	snrnp200	99	95.032	ENSAOCG00000024593	snrnp200	100	94.391	Amphiprion_ocellaris
ENSMZEG00005010787	snrnp200	99	94.498	ENSAPEG00000012554	snrnp200	100	94.498	Amphiprion_percula
ENSMZEG00005010787	snrnp200	99	95.032	ENSATEG00000022522	snrnp200	97	95.032	Anabas_testudineus
ENSMZEG00005010787	snrnp200	99	88.094	ENSAPLG00000004313	SNRNP200	98	88.047	Anas_platyrhynchos
ENSMZEG00005010787	snrnp200	99	87.477	ENSACAG00000000434	SNRNP200	97	87.477	Anolis_carolinensis
ENSMZEG00005010787	snrnp200	99	84.665	ENSANAG00000036625	SNRNP200	97	84.619	Aotus_nancymaae
ENSMZEG00005010787	snrnp200	100	99.946	ENSACLG00000011188	snrnp200	100	99.946	Astatotilapia_calliptera
ENSMZEG00005010787	snrnp200	99	91.555	ENSAMXG00000005684	snrnp200	97	91.613	Astyanax_mexicanus
ENSMZEG00005010787	snrnp200	99	87.560	ENSBTAG00000000848	SNRNP200	97	87.513	Bos_taurus
ENSMZEG00005010787	snrnp200	99	87.774	ENSCJAG00000007514	SNRNP200	97	87.727	Callithrix_jacchus
ENSMZEG00005010787	snrnp200	99	86.968	ENSCAFG00020019979	SNRNP200	99	88.615	Canis_lupus_dingo
ENSMZEG00005010787	snrnp200	99	87.774	ENSCHIG00000020611	SNRNP200	97	87.727	Capra_hircus
ENSMZEG00005010787	snrnp200	99	87.880	ENSTSYG00000010467	SNRNP200	97	87.834	Carlito_syrichta
ENSMZEG00005010787	snrnp200	99	87.433	ENSCAPG00000017234	SNRNP200	98	87.387	Cavia_aperea
ENSMZEG00005010787	snrnp200	99	87.667	ENSCPOG00000006776	SNRNP200	97	87.620	Cavia_porcellus
ENSMZEG00005010787	snrnp200	99	87.774	ENSCCAG00000033962	SNRNP200	97	87.727	Cebus_capucinus
ENSMZEG00005010787	snrnp200	99	87.827	ENSCATG00000015790	SNRNP200	97	87.780	Cercocebus_atys
ENSMZEG00005010787	snrnp200	99	87.720	ENSCLAG00000004116	SNRNP200	97	87.673	Chinchilla_lanigera
ENSMZEG00005010787	snrnp200	99	87.827	ENSCSAG00000017369	SNRNP200	97	87.780	Chlorocebus_sabaeus
ENSMZEG00005010787	snrnp200	75	92.105	ENSCHOG00000012981	-	55	92.105	Choloepus_hoffmanni
ENSMZEG00005010787	snrnp200	99	87.793	ENSCPBG00000022571	SNRNP200	97	87.746	Chrysemys_picta_bellii
ENSMZEG00005010787	snrnp200	99	73.723	ENSCING00000005082	-	97	73.936	Ciona_intestinalis
ENSMZEG00005010787	snrnp200	95	87.590	ENSCANG00000033932	SNRNP200	99	87.590	Colobus_angolensis_palliatus
ENSMZEG00005010787	snrnp200	99	87.827	ENSCGRG00001022610	Snrnp200	97	87.780	Cricetulus_griseus_chok1gshd
ENSMZEG00005010787	snrnp200	99	87.260	ENSCGRG00000016472	Snrnp200	97	87.214	Cricetulus_griseus_crigri
ENSMZEG00005010787	snrnp200	99	93.212	ENSCSEG00000016399	snrnp200	97	93.212	Cynoglossus_semilaevis
ENSMZEG00005010787	snrnp200	99	88.355	ENSCVAG00000017631	snrnp200	97	88.355	Cyprinodon_variegatus
ENSMZEG00005010787	snrnp200	99	91.876	ENSDARG00000077536	snrnp200	97	91.934	Danio_rerio
ENSMZEG00005010787	snrnp200	99	86.332	ENSDNOG00000011227	SNRNP200	97	86.286	Dasypus_novemcinctus
ENSMZEG00005010787	snrnp200	99	85.029	ENSDORG00000005861	Snrnp200	97	84.984	Dipodomys_ordii
ENSMZEG00005010787	snrnp200	99	70.807	FBgn0263599	l(3)72Ab	97	70.913	Drosophila_melanogaster
ENSMZEG00005010787	snrnp200	94	94.581	ENSETEG00000000162	SNRNP200	67	94.581	Echinops_telfairi
ENSMZEG00005010787	snrnp200	83	77.848	ENSEBUG00000016524	snrnp200	95	77.848	Eptatretus_burgeri
ENSMZEG00005010787	snrnp200	99	86.663	ENSEASG00005001884	SNRNP200	97	86.511	Equus_asinus_asinus
ENSMZEG00005010787	snrnp200	99	89.375	ENSECAG00000019675	SNRNP200	97	87.780	Equus_caballus
ENSMZEG00005010787	snrnp200	91	86.231	ENSEEUG00000012178	SNRNP200	89	86.300	Erinaceus_europaeus
ENSMZEG00005010787	snrnp200	99	93.002	ENSELUG00000018948	snrnp200	97	92.952	Esox_lucius
ENSMZEG00005010787	snrnp200	99	87.880	ENSFCAG00000010699	SNRNP200	97	87.834	Felis_catus
ENSMZEG00005010787	snrnp200	94	84.615	ENSFALG00000001368	-	93	84.615	Ficedula_albicollis
ENSMZEG00005010787	snrnp200	99	87.667	ENSFDAG00000004683	SNRNP200	97	87.620	Fukomys_damarensis
ENSMZEG00005010787	snrnp200	99	91.346	ENSFHEG00000003786	snrnp200	97	91.346	Fundulus_heteroclitus
ENSMZEG00005010787	snrnp200	99	92.098	ENSGMOG00000004881	snrnp200	97	91.889	Gadus_morhua
ENSMZEG00005010787	snrnp200	99	91.453	ENSGAFG00000010807	snrnp200	97	91.453	Gambusia_affinis
ENSMZEG00005010787	snrnp200	99	94.293	ENSGACG00000011474	snrnp200	97	94.293	Gasterosteus_aculeatus
ENSMZEG00005010787	snrnp200	92	90.244	ENSGAGG00000016069	SNRNP200	97	87.889	Gopherus_agassizii
ENSMZEG00005010787	snrnp200	99	87.827	ENSGGOG00000005174	SNRNP200	97	91.964	Gorilla_gorilla
ENSMZEG00005010787	snrnp200	100	100.000	ENSHBUG00000011322	snrnp200	100	100.000	Haplochromis_burtoni
ENSMZEG00005010787	snrnp200	99	87.720	ENSHGLG00000006654	SNRNP200	97	87.673	Heterocephalus_glaber_female
ENSMZEG00005010787	snrnp200	99	87.720	ENSHGLG00100018594	SNRNP200	97	87.673	Heterocephalus_glaber_male
ENSMZEG00005010787	snrnp200	99	87.827	ENSSTOG00000016351	SNRNP200	97	87.780	Ictidomys_tridecemlineatus
ENSMZEG00005010787	snrnp200	99	87.774	ENSJJAG00000023659	Snrnp200	97	87.727	Jaculus_jaculus
ENSMZEG00005010787	snrnp200	99	91.166	ENSKMAG00000003665	snrnp200	97	91.166	Kryptolebias_marmoratus
ENSMZEG00005010787	snrnp200	99	94.712	ENSLBEG00000021585	snrnp200	97	94.712	Labrus_bergylta
ENSMZEG00005010787	snrnp200	81	89.288	ENSLACG00000000226	SNRNP200	99	89.288	Latimeria_chalumnae
ENSMZEG00005010787	snrnp200	99	91.244	ENSLOCG00000015198	snrnp200	97	91.195	Lepisosteus_oculatus
ENSMZEG00005010787	snrnp200	99	87.507	ENSLAFG00000015626	SNRNP200	97	87.460	Loxodonta_africana
ENSMZEG00005010787	snrnp200	99	87.774	ENSMFAG00000040174	SNRNP200	99	91.570	Macaca_fascicularis
ENSMZEG00005010787	snrnp200	99	87.774	ENSMMUG00000023261	SNRNP200	97	87.727	Macaca_mulatta
ENSMZEG00005010787	snrnp200	99	87.720	ENSMNEG00000032398	SNRNP200	97	87.673	Macaca_nemestrina
ENSMZEG00005010787	snrnp200	99	87.827	ENSMLEG00000019083	SNRNP200	99	91.570	Mandrillus_leucophaeus
ENSMZEG00005010787	snrnp200	99	94.444	ENSMAMG00000007851	snrnp200	97	94.394	Mastacembelus_armatus
ENSMZEG00005010787	snrnp200	99	87.817	ENSMGAG00000001831	SNRNP200	99	87.811	Meleagris_gallopavo
ENSMZEG00005010787	snrnp200	99	87.880	ENSMAUG00000011825	Snrnp200	97	87.834	Mesocricetus_auratus
ENSMZEG00005010787	snrnp200	99	87.880	ENSMICG00000004710	SNRNP200	98	91.268	Microcebus_murinus
ENSMZEG00005010787	snrnp200	99	85.852	ENSMOCG00000011814	Snrnp200	97	85.806	Microtus_ochrogaster
ENSMZEG00005010787	snrnp200	99	92.147	ENSMMOG00000014167	snrnp200	97	92.147	Mola_mola
ENSMZEG00005010787	snrnp200	99	87.827	ENSMODG00000008475	SNRNP200	97	87.780	Monodelphis_domestica
ENSMZEG00005010787	snrnp200	99	94.605	ENSMALG00000001973	snrnp200	97	94.605	Monopterus_albus
ENSMZEG00005010787	snrnp200	99	87.720	MGP_CAROLIEiJ_G0024250	Snrnp200	97	87.673	Mus_caroli
ENSMZEG00005010787	snrnp200	99	87.774	ENSMUSG00000003660	Snrnp200	97	87.727	Mus_musculus
ENSMZEG00005010787	snrnp200	99	87.774	MGP_PahariEiJ_G0025695	Snrnp200	97	87.727	Mus_pahari
ENSMZEG00005010787	snrnp200	94	94.483	MGP_SPRETEiJ_G0025170	Snrnp200	96	94.483	Mus_spretus
ENSMZEG00005010787	snrnp200	99	87.827	ENSMPUG00000008949	SNRNP200	97	87.780	Mustela_putorius_furo
ENSMZEG00005010787	snrnp200	99	84.784	ENSMLUG00000027511	-	97	84.739	Myotis_lucifugus
ENSMZEG00005010787	snrnp200	99	87.313	ENSMLUG00000010493	SNRNP200	97	87.267	Myotis_lucifugus
ENSMZEG00005010787	snrnp200	99	87.827	ENSNGAG00000021993	Snrnp200	97	87.780	Nannospalax_galili
ENSMZEG00005010787	snrnp200	92	96.889	ENSNBRG00000017960	snrnp200	99	96.889	Neolamprologus_brichardi
ENSMZEG00005010787	snrnp200	99	82.945	ENSNLEG00000000025	SNRNP200	97	82.954	Nomascus_leucogenys
ENSMZEG00005010787	snrnp200	99	87.500	ENSMEUG00000010532	SNRNP200	71	87.500	Notamacropus_eugenii
ENSMZEG00005010787	snrnp200	98	86.883	ENSOPRG00000015464	SNRNP200	96	86.898	Ochotona_princeps
ENSMZEG00005010787	snrnp200	99	87.667	ENSODEG00000008366	SNRNP200	97	87.620	Octodon_degus
ENSMZEG00005010787	snrnp200	99	97.007	ENSONIG00000010714	snrnp200	97	97.007	Oreochromis_niloticus
ENSMZEG00005010787	snrnp200	99	87.774	ENSOCUG00000009864	SNRNP200	97	87.727	Oryctolagus_cuniculus
ENSMZEG00005010787	snrnp200	99	93.373	ENSORLG00000012286	snrnp200	99	93.475	Oryzias_latipes
ENSMZEG00005010787	snrnp200	99	93.533	ENSORLG00020004648	snrnp200	97	93.483	Oryzias_latipes_hni
ENSMZEG00005010787	snrnp200	99	93.586	ENSORLG00015019114	snrnp200	99	93.418	Oryzias_latipes_hsok
ENSMZEG00005010787	snrnp200	99	93.800	ENSOMEG00000011834	snrnp200	97	93.750	Oryzias_melastigma
ENSMZEG00005010787	snrnp200	99	87.880	ENSOGAG00000006879	SNRNP200	97	87.834	Otolemur_garnettii
ENSMZEG00005010787	snrnp200	99	87.460	ENSOARG00000013949	SNRNP200	97	87.413	Ovis_aries
ENSMZEG00005010787	snrnp200	99	87.827	ENSPPAG00000041559	SNRNP200	97	87.780	Pan_paniscus
ENSMZEG00005010787	snrnp200	99	87.880	ENSPPRG00000004435	SNRNP200	97	87.834	Panthera_pardus
ENSMZEG00005010787	snrnp200	99	87.400	ENSPTIG00000006380	SNRNP200	97	87.353	Panthera_tigris_altaica
ENSMZEG00005010787	snrnp200	99	87.827	ENSPTRG00000012230	SNRNP200	97	87.780	Pan_troglodytes
ENSMZEG00005010787	snrnp200	99	87.827	ENSPANG00000006017	SNRNP200	97	87.780	Papio_anubis
ENSMZEG00005010787	snrnp200	99	92.419	ENSPKIG00000014762	snrnp200	99	93.337	Paramormyrops_kingsleyae
ENSMZEG00005010787	snrnp200	99	86.926	ENSPSIG00000008580	SNRNP200	97	86.880	Pelodiscus_sinensis
ENSMZEG00005010787	snrnp200	99	87.774	ENSPCIG00000023050	SNRNP200	97	87.727	Phascolarctos_cinereus
ENSMZEG00005010787	snrnp200	99	94.177	ENSPFOG00000015110	snrnp200	97	94.127	Poecilia_formosa
ENSMZEG00005010787	snrnp200	99	94.134	ENSPLAG00000006711	snrnp200	99	94.134	Poecilia_latipinna
ENSMZEG00005010787	snrnp200	99	94.079	ENSPMEG00000021166	snrnp200	99	94.079	Poecilia_mexicana
ENSMZEG00005010787	snrnp200	99	94.228	ENSPREG00000008875	snrnp200	97	94.228	Poecilia_reticulata
ENSMZEG00005010787	snrnp200	99	87.827	ENSPPYG00000012068	SNRNP200	97	87.780	Pongo_abelii
ENSMZEG00005010787	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	83	94.872	Procavia_capensis
ENSMZEG00005010787	snrnp200	99	87.827	ENSPCOG00000024608	SNRNP200	97	87.780	Propithecus_coquereli
ENSMZEG00005010787	snrnp200	94	89.673	ENSPVAG00000005860	SNRNP200	89	89.673	Pteropus_vampyrus
ENSMZEG00005010787	snrnp200	99	97.019	ENSPNYG00000017476	snrnp200	97	97.019	Pundamilia_nyererei
ENSMZEG00005010787	snrnp200	99	87.126	ENSPNAG00000010998	snrnp200	97	87.080	Pygocentrus_nattereri
ENSMZEG00005010787	snrnp200	99	87.880	ENSRNOG00000012157	Snrnp200	97	87.834	Rattus_norvegicus
ENSMZEG00005010787	snrnp200	99	87.827	ENSRBIG00000044690	-	97	87.780	Rhinopithecus_bieti
ENSMZEG00005010787	snrnp200	99	87.827	ENSRROG00000037952	-	97	87.780	Rhinopithecus_roxellana
ENSMZEG00005010787	snrnp200	99	87.774	ENSSBOG00000035471	SNRNP200	97	91.740	Saimiri_boliviensis_boliviensis
ENSMZEG00005010787	snrnp200	99	87.763	ENSSHAG00000000758	SNRNP200	99	87.757	Sarcophilus_harrisii
ENSMZEG00005010787	snrnp200	99	92.472	ENSSFOG00015018826	snrnp200	97	92.472	Scleropages_formosus
ENSMZEG00005010787	snrnp200	99	94.765	ENSSMAG00000005463	snrnp200	99	94.717	Scophthalmus_maximus
ENSMZEG00005010787	snrnp200	99	95.139	ENSSDUG00000021410	snrnp200	97	95.139	Seriola_dumerili
ENSMZEG00005010787	snrnp200	99	95.192	ENSSLDG00000010884	snrnp200	97	95.192	Seriola_lalandi_dorsalis
ENSMZEG00005010787	snrnp200	95	86.335	ENSSARG00000010728	SNRNP200	92	86.293	Sorex_araneus
ENSMZEG00005010787	snrnp200	99	88.041	ENSSPUG00000003726	-	97	87.994	Sphenodon_punctatus
ENSMZEG00005010787	snrnp200	99	95.304	ENSSPAG00000001842	snrnp200	98	95.304	Stegastes_partitus
ENSMZEG00005010787	snrnp200	99	87.880	ENSSSCG00000008127	SNRNP200	99	87.846	Sus_scrofa
ENSMZEG00005010787	snrnp200	97	79.749	ENSTGUG00000014475	-	98	79.674	Taeniopygia_guttata
ENSMZEG00005010787	snrnp200	99	93.693	ENSTRUG00000001307	snrnp200	97	93.643	Takifugu_rubripes
ENSMZEG00005010787	snrnp200	99	88.264	ENSTNIG00000004320	snrnp200	97	80.309	Tetraodon_nigroviridis
ENSMZEG00005010787	snrnp200	75	91.282	ENSTBEG00000003329	-	53	91.282	Tupaia_belangeri
ENSMZEG00005010787	snrnp200	99	87.667	ENSTTRG00000004983	SNRNP200	97	87.620	Tursiops_truncatus
ENSMZEG00005010787	snrnp200	81	82.492	ENSUAMG00000008395	-	90	82.170	Ursus_americanus
ENSMZEG00005010787	snrnp200	99	87.880	ENSUMAG00000012385	SNRNP200	97	87.834	Ursus_maritimus
ENSMZEG00005010787	snrnp200	83	93.361	ENSVPAG00000006434	SNRNP200	53	93.361	Vicugna_pacos
ENSMZEG00005010787	snrnp200	99	87.887	ENSVVUG00000026247	SNRNP200	99	87.887	Vulpes_vulpes
ENSMZEG00005010787	snrnp200	99	87.714	ENSXETG00000001243	snrnp200	97	87.667	Xenopus_tropicalis
ENSMZEG00005010787	snrnp200	99	94.335	ENSXMAG00000002058	snrnp200	98	94.335	Xiphophorus_maculatus