EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005010796 (Gene tree)
Gene ID: 101481657
Gene Symbol: polr2eb
Alias: fk97g10|polr2e|wu:fk97g10|zgc:101098
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 4335 bases
Position: chrLG23:5349618-5353952
Accession: 101481657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014341	RNA_pol_Rpb5_N	PF03871.14	7e-35	1	1
ENSMZEP00005014344	RNA_pol_Rpb5_N	PF03871.14	7.5e-35	1	1
ENSMZEP00005014341	RNA_pol_Rpb5_C	PF01191.19	2.4e-30	1	1
ENSMZEP00005014344	RNA_pol_Rpb5_C	PF01191.19	5.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005014823	-	597	-	ENSMZEP00005014344	198 (aa)	-	-
ENSMZET00005014820	-	552	XM_004554875	ENSMZEP00005014341	183 (aa)	XP_004554932	-

Gene Model

Click here to download ENSMZEG00005010796's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03020	RNA polymerase	KEGG
mze04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005010796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005010796	polr2eb	100	94.536	ENSG00000099817	POLR2E	99	94.536	Homo_sapiens
ENSMZEG00005010796	polr2eb	100	99.454	ENSAPOG00000002935	polr2eb	100	99.454	Acanthochromis_polyacanthus
ENSMZEG00005010796	polr2eb	96	95.789	ENSAMEG00000003159	POLR2E	90	95.789	Ailuropoda_melanoleuca
ENSMZEG00005010796	polr2eb	100	100.000	ENSACIG00000024371	polr2eb	100	100.000	Amphilophus_citrinellus
ENSMZEG00005010796	polr2eb	100	99.454	ENSAOCG00000018166	polr2eb	100	99.454	Amphiprion_ocellaris
ENSMZEG00005010796	polr2eb	96	99.474	ENSAPEG00000009000	polr2eb	90	99.474	Amphiprion_percula
ENSMZEG00005010796	polr2eb	100	99.454	ENSATEG00000023760	polr2eb	100	99.454	Anabas_testudineus
ENSMZEG00005010796	polr2eb	100	95.082	ENSANAG00000038488	POLR2E	99	95.082	Aotus_nancymaae
ENSMZEG00005010796	polr2eb	100	100.000	ENSACLG00000005254	polr2eb	100	100.000	Astatotilapia_calliptera
ENSMZEG00005010796	polr2eb	96	98.947	ENSAMXG00000018915	POLR2E	90	98.947	Astyanax_mexicanus
ENSMZEG00005010796	polr2eb	96	95.789	ENSBTAG00000020776	POLR2E	90	95.789	Bos_taurus
ENSMZEG00005010796	polr2eb	95	77.249	WBGene00019246	rpb-5	99	70.192	Caenorhabditis_elegans
ENSMZEG00005010796	polr2eb	61	89.167	ENSCJAG00000007666	-	66	89.167	Callithrix_jacchus
ENSMZEG00005010796	polr2eb	96	92.632	ENSCAFG00000019546	POLR2E	90	92.632	Canis_familiaris
ENSMZEG00005010796	polr2eb	96	95.789	ENSCAFG00020017111	POLR2E	90	95.789	Canis_lupus_dingo
ENSMZEG00005010796	polr2eb	96	95.789	ENSCHIG00000014151	POLR2E	90	95.789	Capra_hircus
ENSMZEG00005010796	polr2eb	100	75.410	ENSTSYG00000026377	POLR2E	100	75.410	Carlito_syrichta
ENSMZEG00005010796	polr2eb	87	95.349	ENSCAPG00000010843	POLR2E	83	95.349	Cavia_aperea
ENSMZEG00005010796	polr2eb	96	95.789	ENSCPOG00000001542	POLR2E	90	95.789	Cavia_porcellus
ENSMZEG00005010796	polr2eb	100	95.082	ENSCCAG00000025658	POLR2E	99	95.082	Cebus_capucinus
ENSMZEG00005010796	polr2eb	100	95.082	ENSCATG00000008926	POLR2E	99	95.082	Cercocebus_atys
ENSMZEG00005010796	polr2eb	96	95.263	ENSCLAG00000014874	-	90	95.263	Chinchilla_lanigera
ENSMZEG00005010796	polr2eb	95	73.016	ENSCLAG00000009238	-	91	73.016	Chinchilla_lanigera
ENSMZEG00005010796	polr2eb	96	95.789	ENSCSAG00000012336	POLR2E	90	95.789	Chlorocebus_sabaeus
ENSMZEG00005010796	polr2eb	96	96.316	ENSCPBG00000009702	POLR2E	90	96.316	Chrysemys_picta_bellii
ENSMZEG00005010796	polr2eb	96	86.316	ENSCING00000024933	-	90	86.316	Ciona_intestinalis
ENSMZEG00005010796	polr2eb	100	95.082	ENSCANG00000025560	POLR2E	99	95.082	Colobus_angolensis_palliatus
ENSMZEG00005010796	polr2eb	96	95.789	ENSCGRG00001022927	Polr2e	90	95.789	Cricetulus_griseus_chok1gshd
ENSMZEG00005010796	polr2eb	96	88.718	ENSCGRG00000016441	Polr2e	91	88.718	Cricetulus_griseus_crigri
ENSMZEG00005010796	polr2eb	100	98.361	ENSCSEG00000007107	polr2eb	100	98.361	Cynoglossus_semilaevis
ENSMZEG00005010796	polr2eb	100	99.454	ENSCVAG00000019940	polr2eb	100	99.454	Cyprinodon_variegatus
ENSMZEG00005010796	polr2eb	96	98.421	ENSDARG00000026183	polr2eb	90	98.421	Danio_rerio
ENSMZEG00005010796	polr2eb	96	95.812	ENSDNOG00000044994	POLR2E	84	95.812	Dasypus_novemcinctus
ENSMZEG00005010796	polr2eb	96	95.789	ENSDORG00000001154	Polr2e	90	95.789	Dipodomys_ordii
ENSMZEG00005010796	polr2eb	96	85.789	FBgn0033571	Rpb5	90	85.789	Drosophila_melanogaster
ENSMZEG00005010796	polr2eb	79	92.357	ENSEBUG00000010159	-	76	92.357	Eptatretus_burgeri
ENSMZEG00005010796	polr2eb	63	87.200	ENSEASG00005021615	POLR2E	58	80.986	Equus_asinus_asinus
ENSMZEG00005010796	polr2eb	100	95.628	ENSECAG00000011124	POLR2E	100	95.628	Equus_caballus
ENSMZEG00005010796	polr2eb	100	97.268	ENSELUG00000005815	POLR2E	100	97.268	Esox_lucius
ENSMZEG00005010796	polr2eb	100	96.175	ENSELUG00000020646	polr2e	100	96.175	Esox_lucius
ENSMZEG00005010796	polr2eb	99	95.604	ENSFCAG00000007318	POLR2E	100	95.604	Felis_catus
ENSMZEG00005010796	polr2eb	87	95.930	ENSFALG00000013986	POLR2E	89	95.930	Ficedula_albicollis
ENSMZEG00005010796	polr2eb	96	95.789	ENSFDAG00000014539	POLR2E	90	95.789	Fukomys_damarensis
ENSMZEG00005010796	polr2eb	100	99.454	ENSFHEG00000022398	polr2eb	100	99.454	Fundulus_heteroclitus
ENSMZEG00005010796	polr2eb	96	98.421	ENSGMOG00000007615	polr2eb	90	98.421	Gadus_morhua
ENSMZEG00005010796	polr2eb	96	96.316	ENSGALG00000002591	POLR2E	90	96.316	Gallus_gallus
ENSMZEG00005010796	polr2eb	100	100.000	ENSGAFG00000005087	polr2eb	100	100.000	Gambusia_affinis
ENSMZEG00005010796	polr2eb	96	97.895	ENSGACG00000013247	polr2eb	90	97.895	Gasterosteus_aculeatus
ENSMZEG00005010796	polr2eb	96	96.316	ENSGAGG00000008356	POLR2E	90	96.316	Gopherus_agassizii
ENSMZEG00005010796	polr2eb	100	95.082	ENSGGOG00000011267	POLR2E	99	95.082	Gorilla_gorilla
ENSMZEG00005010796	polr2eb	63	93.913	ENSHBUG00000011099	polr2eb	100	93.913	Haplochromis_burtoni
ENSMZEG00005010796	polr2eb	96	95.789	ENSHGLG00000013330	POLR2E	90	95.789	Heterocephalus_glaber_female
ENSMZEG00005010796	polr2eb	96	95.789	ENSHGLG00100011014	POLR2E	90	95.789	Heterocephalus_glaber_male
ENSMZEG00005010796	polr2eb	100	97.814	ENSHCOG00000000906	polr2eb	100	97.814	Hippocampus_comes
ENSMZEG00005010796	polr2eb	57	95.536	ENSHCOG00000012099	-	88	95.536	Hippocampus_comes
ENSMZEG00005010796	polr2eb	96	99.474	ENSIPUG00000019801	polr2e	90	99.474	Ictalurus_punctatus
ENSMZEG00005010796	polr2eb	96	95.789	ENSSTOG00000002853	POLR2E	90	95.789	Ictidomys_tridecemlineatus
ENSMZEG00005010796	polr2eb	96	95.789	ENSJJAG00000016595	-	90	95.789	Jaculus_jaculus
ENSMZEG00005010796	polr2eb	100	89.617	ENSJJAG00000003145	-	100	89.617	Jaculus_jaculus
ENSMZEG00005010796	polr2eb	81	78.882	ENSJJAG00000015812	-	100	78.882	Jaculus_jaculus
ENSMZEG00005010796	polr2eb	96	99.474	ENSKMAG00000005954	polr2eb	90	99.474	Kryptolebias_marmoratus
ENSMZEG00005010796	polr2eb	100	99.454	ENSLBEG00000024802	polr2eb	100	99.454	Labrus_bergylta
ENSMZEG00005010796	polr2eb	96	96.842	ENSLACG00000013686	POLR2E	90	96.842	Latimeria_chalumnae
ENSMZEG00005010796	polr2eb	82	100.000	ENSLOCG00000004599	POLR2E	100	100.000	Lepisosteus_oculatus
ENSMZEG00005010796	polr2eb	96	74.479	ENSLAFG00000025587	POLR2E	90	74.479	Loxodonta_africana
ENSMZEG00005010796	polr2eb	100	95.082	ENSMFAG00000002884	POLR2E	99	95.082	Macaca_fascicularis
ENSMZEG00005010796	polr2eb	100	95.082	ENSMMUG00000013927	POLR2E	99	95.082	Macaca_mulatta
ENSMZEG00005010796	polr2eb	100	95.082	ENSMNEG00000034046	-	99	95.082	Macaca_nemestrina
ENSMZEG00005010796	polr2eb	89	68.362	ENSMNEG00000033452	-	95	68.362	Macaca_nemestrina
ENSMZEG00005010796	polr2eb	91	75.904	ENSMLEG00000012405	POLR2E	93	75.904	Mandrillus_leucophaeus
ENSMZEG00005010796	polr2eb	100	99.454	ENSMAMG00000018703	polr2eb	100	99.454	Mastacembelus_armatus
ENSMZEG00005010796	polr2eb	96	95.288	ENSMGAG00000003769	POLR2E	91	95.288	Meleagris_gallopavo
ENSMZEG00005010796	polr2eb	95	62.963	ENSMAUG00000011003	-	100	53.810	Mesocricetus_auratus
ENSMZEG00005010796	polr2eb	87	94.798	ENSMAUG00000010125	-	90	95.322	Mesocricetus_auratus
ENSMZEG00005010796	polr2eb	100	95.628	ENSMICG00000013063	POLR2E	99	95.628	Microcebus_murinus
ENSMZEG00005010796	polr2eb	96	95.789	ENSMOCG00000013414	Polr2e	90	95.789	Microtus_ochrogaster
ENSMZEG00005010796	polr2eb	100	97.268	ENSMMOG00000001161	polr2eb	100	97.268	Mola_mola
ENSMZEG00005010796	polr2eb	86	88.304	ENSMMOG00000001167	polr2eb	79	88.304	Mola_mola
ENSMZEG00005010796	polr2eb	96	96.316	ENSMODG00000005494	POLR2E	90	96.316	Monodelphis_domestica
ENSMZEG00005010796	polr2eb	96	99.474	ENSMALG00000021888	polr2eb	90	99.474	Monopterus_albus
ENSMZEG00005010796	polr2eb	96	95.789	MGP_CAROLIEiJ_G0015561	Polr2e	90	95.789	Mus_caroli
ENSMZEG00005010796	polr2eb	96	95.789	ENSMUSG00000004667	Polr2e	90	95.789	Mus_musculus
ENSMZEG00005010796	polr2eb	96	95.789	MGP_PahariEiJ_G0030974	Polr2e	90	95.789	Mus_pahari
ENSMZEG00005010796	polr2eb	96	95.789	MGP_SPRETEiJ_G0016379	Polr2e	90	95.789	Mus_spretus
ENSMZEG00005010796	polr2eb	96	95.263	ENSMPUG00000008953	POLR2E	90	95.263	Mustela_putorius_furo
ENSMZEG00005010796	polr2eb	96	95.789	ENSMLUG00000013193	POLR2E	90	95.789	Myotis_lucifugus
ENSMZEG00005010796	polr2eb	70	91.304	ENSMLUG00000006376	-	100	80.247	Myotis_lucifugus
ENSMZEG00005010796	polr2eb	96	95.789	ENSNGAG00000001147	Polr2e	90	95.789	Nannospalax_galili
ENSMZEG00005010796	polr2eb	90	73.184	ENSNGAG00000017344	-	96	73.184	Nannospalax_galili
ENSMZEG00005010796	polr2eb	100	100.000	ENSNBRG00000022772	polr2eb	100	100.000	Neolamprologus_brichardi
ENSMZEG00005010796	polr2eb	100	91.304	ENSNLEG00000001207	-	100	91.304	Nomascus_leucogenys
ENSMZEG00005010796	polr2eb	98	72.165	ENSNLEG00000031364	-	100	68.844	Nomascus_leucogenys
ENSMZEG00005010796	polr2eb	96	83.158	ENSOPRG00000008331	POLR2E	90	83.158	Ochotona_princeps
ENSMZEG00005010796	polr2eb	94	85.484	ENSODEG00000007985	-	100	85.484	Octodon_degus
ENSMZEG00005010796	polr2eb	100	71.354	ENSODEG00000011490	-	100	71.354	Octodon_degus
ENSMZEG00005010796	polr2eb	96	95.789	ENSODEG00000013230	-	90	95.789	Octodon_degus
ENSMZEG00005010796	polr2eb	96	99.474	ENSONIG00000002519	polr2eb	90	99.474	Oreochromis_niloticus
ENSMZEG00005010796	polr2eb	100	100.000	ENSORLG00000015346	polr2eb	100	100.000	Oryzias_latipes
ENSMZEG00005010796	polr2eb	100	100.000	ENSORLG00020020700	polr2e	100	100.000	Oryzias_latipes_hni
ENSMZEG00005010796	polr2eb	100	100.000	ENSORLG00015016842	polr2e	100	100.000	Oryzias_latipes_hsok
ENSMZEG00005010796	polr2eb	96	99.474	ENSOMEG00000002709	polr2eb	90	99.474	Oryzias_melastigma
ENSMZEG00005010796	polr2eb	96	95.789	ENSOGAG00000012311	POLR2E	90	95.789	Otolemur_garnettii
ENSMZEG00005010796	polr2eb	96	95.789	ENSOARG00000010994	POLR2E	90	95.789	Ovis_aries
ENSMZEG00005010796	polr2eb	90	94.512	ENSPPAG00000003145	POLR2E	99	94.512	Pan_paniscus
ENSMZEG00005010796	polr2eb	99	95.604	ENSPPRG00000000777	POLR2E	100	95.604	Panthera_pardus
ENSMZEG00005010796	polr2eb	90	86.061	ENSPTIG00000012237	POLR2E	98	90.789	Panthera_tigris_altaica
ENSMZEG00005010796	polr2eb	100	95.082	ENSPTRG00000010183	POLR2E	99	95.082	Pan_troglodytes
ENSMZEG00005010796	polr2eb	100	95.082	ENSPANG00000018011	POLR2E	99	95.082	Papio_anubis
ENSMZEG00005010796	polr2eb	100	97.814	ENSPKIG00000009607	POLR2E	100	97.814	Paramormyrops_kingsleyae
ENSMZEG00005010796	polr2eb	100	97.814	ENSPKIG00000024123	POLR2E	100	97.814	Paramormyrops_kingsleyae
ENSMZEG00005010796	polr2eb	93	91.892	ENSPSIG00000002870	POLR2E	89	91.892	Pelodiscus_sinensis
ENSMZEG00005010796	polr2eb	100	99.454	ENSPMGG00000014354	polr2eb	100	99.454	Periophthalmus_magnuspinnatus
ENSMZEG00005010796	polr2eb	96	95.789	ENSPEMG00000023261	Polr2e	90	95.789	Peromyscus_maniculatus_bairdii
ENSMZEG00005010796	polr2eb	95	96.296	ENSPCIG00000007312	POLR2E	75	96.296	Phascolarctos_cinereus
ENSMZEG00005010796	polr2eb	96	100.000	ENSPFOG00000005734	polr2eb	90	100.000	Poecilia_formosa
ENSMZEG00005010796	polr2eb	100	100.000	ENSPLAG00000014496	polr2eb	100	100.000	Poecilia_latipinna
ENSMZEG00005010796	polr2eb	100	100.000	ENSPMEG00000008053	polr2eb	100	100.000	Poecilia_mexicana
ENSMZEG00005010796	polr2eb	100	100.000	ENSPREG00000006489	polr2eb	100	100.000	Poecilia_reticulata
ENSMZEG00005010796	polr2eb	96	87.435	ENSPPYG00000009305	POLR2E	91	87.435	Pongo_abelii
ENSMZEG00005010796	polr2eb	56	93.694	ENSPCAG00000016605	POLR2E	100	93.694	Procavia_capensis
ENSMZEG00005010796	polr2eb	100	95.082	ENSPCOG00000014491	POLR2E	98	95.082	Propithecus_coquereli
ENSMZEG00005010796	polr2eb	75	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSMZEG00005010796	polr2eb	99	100.000	ENSPNYG00000019797	polr2eb	99	100.000	Pundamilia_nyererei
ENSMZEG00005010796	polr2eb	100	98.361	ENSPNAG00000026263	POLR2E	100	98.361	Pygocentrus_nattereri
ENSMZEG00005010796	polr2eb	96	95.789	ENSRNOG00000013545	Polr2e	90	95.789	Rattus_norvegicus
ENSMZEG00005010796	polr2eb	100	95.082	ENSRBIG00000028726	-	99	95.082	Rhinopithecus_bieti
ENSMZEG00005010796	polr2eb	96	72.251	ENSRBIG00000027259	-	92	72.251	Rhinopithecus_bieti
ENSMZEG00005010796	polr2eb	100	95.082	ENSRROG00000043763	POLR2E	99	95.082	Rhinopithecus_roxellana
ENSMZEG00005010796	polr2eb	99	40.553	YBR154C	RPB5	98	40.553	Saccharomyces_cerevisiae
ENSMZEG00005010796	polr2eb	100	95.082	ENSSBOG00000027241	POLR2E	99	95.082	Saimiri_boliviensis_boliviensis
ENSMZEG00005010796	polr2eb	96	96.316	ENSSHAG00000010690	POLR2E	90	96.316	Sarcophilus_harrisii
ENSMZEG00005010796	polr2eb	100	99.454	ENSSFOG00015006073	polr2e	100	99.454	Scleropages_formosus
ENSMZEG00005010796	polr2eb	96	99.474	ENSSMAG00000012782	polr2eb	100	90.164	Scophthalmus_maximus
ENSMZEG00005010796	polr2eb	100	99.454	ENSSDUG00000003352	polr2eb	100	99.454	Seriola_dumerili
ENSMZEG00005010796	polr2eb	100	99.454	ENSSLDG00000004965	polr2eb	100	99.454	Seriola_lalandi_dorsalis
ENSMZEG00005010796	polr2eb	96	95.263	ENSSPUG00000006114	POLR2E	90	95.263	Sphenodon_punctatus
ENSMZEG00005010796	polr2eb	100	99.454	ENSSPAG00000017556	polr2eb	100	99.454	Stegastes_partitus
ENSMZEG00005010796	polr2eb	96	95.789	ENSSSCG00000021472	POLR2E	90	95.789	Sus_scrofa
ENSMZEG00005010796	polr2eb	75	85.507	ENSTGUG00000000922	POLR2E	99	88.571	Taeniopygia_guttata
ENSMZEG00005010796	polr2eb	100	99.454	ENSTRUG00000018238	polr2eb	100	99.454	Takifugu_rubripes
ENSMZEG00005010796	polr2eb	96	99.474	ENSTNIG00000013187	polr2eb	90	99.474	Tetraodon_nigroviridis
ENSMZEG00005010796	polr2eb	96	95.263	ENSTTRG00000001484	POLR2E	90	95.263	Tursiops_truncatus
ENSMZEG00005010796	polr2eb	100	95.082	ENSUAMG00000009166	POLR2E	100	95.082	Ursus_americanus
ENSMZEG00005010796	polr2eb	96	95.789	ENSVVUG00000022818	POLR2E	54	83.333	Vulpes_vulpes
ENSMZEG00005010796	polr2eb	96	96.316	ENSXETG00000003291	polr2e	90	96.316	Xenopus_tropicalis
ENSMZEG00005010796	polr2eb	100	100.000	ENSXCOG00000009197	polr2eb	100	100.000	Xiphophorus_couchianus
ENSMZEG00005010796	polr2eb	100	100.000	ENSXMAG00000026495	polr2eb	100	100.000	Xiphophorus_maculatus