EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005010836 (Gene tree)
Gene ID: 101478811
Gene Symbol: sf3b3 (1 of many)
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 25648 bases
Position: chrLG7:57171151-57196798
Accession: 101478811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014419	CPSF_A	PF03178.15	2.2e-99	1	1
ENSMZEP00005014446	CPSF_A	PF03178.15	8.9e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005014899	-	5488	XM_004564586	ENSMZEP00005014419	1217 (aa)	XP_004564643	UPI00032989F2
ENSMZET00005014928	-	3264	-	ENSMZEP00005014446	1087 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005010836's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005010836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005010836	sf3b3	100	93.098	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSMZEG00005010836	sf3b3	96	98.548	ENSAPOG00000006172	sf3b3	98	98.548	Acanthochromis_polyacanthus
ENSMZEG00005010836	sf3b3	100	92.951	ENSAMEG00000002187	SF3B3	100	92.951	Ailuropoda_melanoleuca
ENSMZEG00005010836	sf3b3	100	99.356	ENSACIG00000016487	sf3b3	100	99.356	Amphilophus_citrinellus
ENSMZEG00005010836	sf3b3	100	98.685	ENSAOCG00000007158	sf3b3	100	98.685	Amphiprion_ocellaris
ENSMZEG00005010836	sf3b3	100	98.685	ENSAPEG00000022786	sf3b3	100	98.685	Amphiprion_percula
ENSMZEG00005010836	sf3b3	100	98.603	ENSATEG00000013708	sf3b3	100	98.603	Anabas_testudineus
ENSMZEG00005010836	sf3b3	82	94.250	ENSAPLG00000004996	SF3B3	99	92.988	Anas_platyrhynchos
ENSMZEG00005010836	sf3b3	100	93.262	ENSACAG00000001817	SF3B3	100	93.262	Anolis_carolinensis
ENSMZEG00005010836	sf3b3	100	93.098	ENSANAG00000028001	SF3B3	100	93.098	Aotus_nancymaae
ENSMZEG00005010836	sf3b3	100	100.000	ENSACLG00000022555	sf3b3	100	100.000	Astatotilapia_calliptera
ENSMZEG00005010836	sf3b3	100	97.617	ENSAMXG00000003410	sf3b3	100	97.617	Astyanax_mexicanus
ENSMZEG00005010836	sf3b3	100	93.098	ENSBTAG00000010627	SF3B3	100	93.098	Bos_taurus
ENSMZEG00005010836	sf3b3	100	59.984	WBGene00019323	teg-4	100	59.984	Caenorhabditis_elegans
ENSMZEG00005010836	sf3b3	100	93.098	ENSCJAG00000014773	SF3B3	99	93.098	Callithrix_jacchus
ENSMZEG00005010836	sf3b3	100	93.180	ENSCAFG00000020151	SF3B3	100	93.180	Canis_familiaris
ENSMZEG00005010836	sf3b3	100	93.180	ENSCAFG00020020912	SF3B3	100	93.180	Canis_lupus_dingo
ENSMZEG00005010836	sf3b3	100	93.180	ENSCHIG00000019822	SF3B3	100	93.180	Capra_hircus
ENSMZEG00005010836	sf3b3	100	93.098	ENSTSYG00000007910	SF3B3	100	93.098	Carlito_syrichta
ENSMZEG00005010836	sf3b3	84	79.634	ENSCAPG00000001484	SF3B3	92	79.634	Cavia_aperea
ENSMZEG00005010836	sf3b3	100	91.865	ENSCPOG00000000586	SF3B3	100	91.865	Cavia_porcellus
ENSMZEG00005010836	sf3b3	100	93.098	ENSCCAG00000017736	SF3B3	100	93.098	Cebus_capucinus
ENSMZEG00005010836	sf3b3	100	93.098	ENSCATG00000036562	SF3B3	100	93.098	Cercocebus_atys
ENSMZEG00005010836	sf3b3	100	93.098	ENSCLAG00000003921	SF3B3	100	93.098	Chinchilla_lanigera
ENSMZEG00005010836	sf3b3	100	93.098	ENSCSAG00000004371	SF3B3	100	93.098	Chlorocebus_sabaeus
ENSMZEG00005010836	sf3b3	90	89.720	ENSCHOG00000001878	SF3B3	90	89.720	Choloepus_hoffmanni
ENSMZEG00005010836	sf3b3	100	92.769	ENSCPBG00000015853	SF3B3	100	92.769	Chrysemys_picta_bellii
ENSMZEG00005010836	sf3b3	100	79.885	ENSCING00000001342	-	100	79.885	Ciona_intestinalis
ENSMZEG00005010836	sf3b3	99	78.732	ENSCSAVG00000011454	-	100	78.654	Ciona_savignyi
ENSMZEG00005010836	sf3b3	100	89.482	ENSCANG00000042920	SF3B3	100	89.975	Colobus_angolensis_palliatus
ENSMZEG00005010836	sf3b3	100	93.016	ENSCGRG00001015908	Sf3b3	100	93.016	Cricetulus_griseus_chok1gshd
ENSMZEG00005010836	sf3b3	100	93.016	ENSCGRG00000010180	Sf3b3	100	93.016	Cricetulus_griseus_crigri
ENSMZEG00005010836	sf3b3	83	96.464	ENSCSEG00000014192	sf3b3	99	96.607	Cynoglossus_semilaevis
ENSMZEG00005010836	sf3b3	100	97.781	ENSCVAG00000010459	sf3b3	100	97.781	Cyprinodon_variegatus
ENSMZEG00005010836	sf3b3	100	97.206	ENSDARG00000103553	sf3b3	100	97.206	Danio_rerio
ENSMZEG00005010836	sf3b3	92	89.778	ENSDNOG00000043626	SF3B3	100	92.768	Dasypus_novemcinctus
ENSMZEG00005010836	sf3b3	100	93.098	ENSDORG00000014176	Sf3b3	100	93.098	Dipodomys_ordii
ENSMZEG00005010836	sf3b3	100	75.122	FBgn0035162	Sf3b3	100	75.122	Drosophila_melanogaster
ENSMZEG00005010836	sf3b3	84	95.781	ENSETEG00000002729	SF3B3	84	95.781	Echinops_telfairi
ENSMZEG00005010836	sf3b3	100	86.524	ENSEBUG00000006117	sf3b3	100	86.524	Eptatretus_burgeri
ENSMZEG00005010836	sf3b3	100	93.180	ENSEASG00005013376	SF3B3	100	93.180	Equus_asinus_asinus
ENSMZEG00005010836	sf3b3	100	93.180	ENSECAG00000014053	SF3B3	100	93.180	Equus_caballus
ENSMZEG00005010836	sf3b3	93	92.632	ENSEEUG00000015611	SF3B3	93	92.632	Erinaceus_europaeus
ENSMZEG00005010836	sf3b3	100	95.984	ENSELUG00000015417	sf3b3	100	95.984	Esox_lucius
ENSMZEG00005010836	sf3b3	100	93.180	ENSFCAG00000009487	SF3B3	100	93.180	Felis_catus
ENSMZEG00005010836	sf3b3	100	92.851	ENSFALG00000007372	SF3B3	100	92.851	Ficedula_albicollis
ENSMZEG00005010836	sf3b3	100	93.098	ENSFDAG00000002608	SF3B3	100	93.098	Fukomys_damarensis
ENSMZEG00005010836	sf3b3	100	98.357	ENSFHEG00000017824	sf3b3	100	98.357	Fundulus_heteroclitus
ENSMZEG00005010836	sf3b3	100	93.596	ENSGMOG00000008139	sf3b3	100	93.596	Gadus_morhua
ENSMZEG00005010836	sf3b3	100	93.098	ENSGALG00000002531	SF3B3	100	93.098	Gallus_gallus
ENSMZEG00005010836	sf3b3	100	97.946	ENSGAFG00000015206	sf3b3	100	97.946	Gambusia_affinis
ENSMZEG00005010836	sf3b3	100	97.783	ENSGACG00000002646	sf3b3	100	97.783	Gasterosteus_aculeatus
ENSMZEG00005010836	sf3b3	96	92.912	ENSGAGG00000006746	SF3B3	97	92.912	Gopherus_agassizii
ENSMZEG00005010836	sf3b3	100	93.098	ENSGGOG00000003246	SF3B3	100	93.098	Gorilla_gorilla
ENSMZEG00005010836	sf3b3	100	95.768	ENSHBUG00000005960	sf3b3	100	95.768	Haplochromis_burtoni
ENSMZEG00005010836	sf3b3	100	93.098	ENSHGLG00000010135	SF3B3	100	93.098	Heterocephalus_glaber_female
ENSMZEG00005010836	sf3b3	100	90.998	ENSHGLG00100011148	SF3B3	100	90.998	Heterocephalus_glaber_male
ENSMZEG00005010836	sf3b3	100	97.699	ENSHCOG00000011981	sf3b3	100	97.699	Hippocampus_comes
ENSMZEG00005010836	sf3b3	100	97.535	ENSIPUG00000020435	sf3b3	100	97.535	Ictalurus_punctatus
ENSMZEG00005010836	sf3b3	100	93.098	ENSSTOG00000007065	SF3B3	100	93.098	Ictidomys_tridecemlineatus
ENSMZEG00005010836	sf3b3	100	93.098	ENSJJAG00000003948	Sf3b3	100	93.098	Jaculus_jaculus
ENSMZEG00005010836	sf3b3	100	95.892	ENSKMAG00000004066	sf3b3	99	98.036	Kryptolebias_marmoratus
ENSMZEG00005010836	sf3b3	100	97.946	ENSLBEG00000018302	sf3b3	100	97.946	Labrus_bergylta
ENSMZEG00005010836	sf3b3	98	89.867	ENSLACG00000012501	SF3B3	99	89.867	Latimeria_chalumnae
ENSMZEG00005010836	sf3b3	100	96.552	ENSLOCG00000007566	sf3b3	100	96.552	Lepisosteus_oculatus
ENSMZEG00005010836	sf3b3	100	93.180	ENSLAFG00000012219	SF3B3	100	93.180	Loxodonta_africana
ENSMZEG00005010836	sf3b3	100	93.098	ENSMFAG00000045487	SF3B3	100	93.098	Macaca_fascicularis
ENSMZEG00005010836	sf3b3	100	93.098	ENSMMUG00000017812	SF3B3	100	93.098	Macaca_mulatta
ENSMZEG00005010836	sf3b3	100	93.098	ENSMNEG00000033385	SF3B3	100	93.098	Macaca_nemestrina
ENSMZEG00005010836	sf3b3	100	89.565	ENSMLEG00000043891	SF3B3	100	89.565	Mandrillus_leucophaeus
ENSMZEG00005010836	sf3b3	100	98.685	ENSMAMG00000016837	sf3b3	100	98.685	Mastacembelus_armatus
ENSMZEG00005010836	sf3b3	96	100.000	ENSMZEG00005026015	sf3b3	99	100.000	Maylandia_zebra
ENSMZEG00005010836	sf3b3	100	93.098	ENSMGAG00000001597	SF3B3	100	93.098	Meleagris_gallopavo
ENSMZEG00005010836	sf3b3	81	76.705	ENSMAUG00000013618	Sf3b3	95	76.779	Mesocricetus_auratus
ENSMZEG00005010836	sf3b3	100	92.125	ENSMICG00000001363	SF3B3	100	92.125	Microcebus_murinus
ENSMZEG00005010836	sf3b3	100	93.016	ENSMOCG00000006108	Sf3b3	100	93.016	Microtus_ochrogaster
ENSMZEG00005010836	sf3b3	96	98.282	ENSMMOG00000002598	sf3b3	97	98.282	Mola_mola
ENSMZEG00005010836	sf3b3	100	89.080	ENSMODG00000014363	SF3B3	100	89.080	Monodelphis_domestica
ENSMZEG00005010836	sf3b3	100	98.028	ENSMALG00000008014	sf3b3	100	98.028	Monopterus_albus
ENSMZEG00005010836	sf3b3	100	93.098	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.098	Mus_caroli
ENSMZEG00005010836	sf3b3	100	93.016	ENSMUSG00000033732	Sf3b3	100	93.016	Mus_musculus
ENSMZEG00005010836	sf3b3	100	92.933	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.933	Mus_spretus
ENSMZEG00005010836	sf3b3	100	93.180	ENSMPUG00000010277	SF3B3	100	93.180	Mustela_putorius_furo
ENSMZEG00005010836	sf3b3	100	93.016	ENSMLUG00000014607	SF3B3	100	93.016	Myotis_lucifugus
ENSMZEG00005010836	sf3b3	100	93.098	ENSNGAG00000021903	Sf3b3	100	93.098	Nannospalax_galili
ENSMZEG00005010836	sf3b3	90	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSMZEG00005010836	sf3b3	100	91.626	ENSNLEG00000016127	SF3B3	100	91.626	Nomascus_leucogenys
ENSMZEG00005010836	sf3b3	92	88.874	ENSMEUG00000004479	SF3B3	94	88.874	Notamacropus_eugenii
ENSMZEG00005010836	sf3b3	98	89.941	ENSOPRG00000009847	SF3B3	100	89.941	Ochotona_princeps
ENSMZEG00005010836	sf3b3	100	93.098	ENSODEG00000014154	SF3B3	100	93.098	Octodon_degus
ENSMZEG00005010836	sf3b3	100	99.753	ENSONIG00000011198	sf3b3	100	99.753	Oreochromis_niloticus
ENSMZEG00005010836	sf3b3	100	93.262	ENSOANG00000001161	-	100	93.262	Ornithorhynchus_anatinus
ENSMZEG00005010836	sf3b3	100	91.126	ENSOCUG00000004139	SF3B3	100	91.126	Oryctolagus_cuniculus
ENSMZEG00005010836	sf3b3	100	97.453	ENSORLG00000013472	sf3b3	100	97.453	Oryzias_latipes
ENSMZEG00005010836	sf3b3	100	97.453	ENSORLG00020017473	sf3b3	100	97.453	Oryzias_latipes_hni
ENSMZEG00005010836	sf3b3	100	97.453	ENSORLG00015007710	sf3b3	100	97.453	Oryzias_latipes_hsok
ENSMZEG00005010836	sf3b3	100	97.617	ENSOMEG00000014483	sf3b3	100	97.617	Oryzias_melastigma
ENSMZEG00005010836	sf3b3	100	92.787	ENSOGAG00000016051	SF3B3	100	92.787	Otolemur_garnettii
ENSMZEG00005010836	sf3b3	100	92.951	ENSOARG00000004816	SF3B3	100	92.951	Ovis_aries
ENSMZEG00005010836	sf3b3	100	93.098	ENSPPAG00000026807	SF3B3	100	93.098	Pan_paniscus
ENSMZEG00005010836	sf3b3	100	93.180	ENSPPRG00000001686	SF3B3	100	93.180	Panthera_pardus
ENSMZEG00005010836	sf3b3	97	93.074	ENSPTIG00000020382	SF3B3	100	93.074	Panthera_tigris_altaica
ENSMZEG00005010836	sf3b3	100	93.098	ENSPTRG00000008308	SF3B3	100	93.098	Pan_troglodytes
ENSMZEG00005010836	sf3b3	100	93.098	ENSPANG00000024075	SF3B3	100	93.098	Papio_anubis
ENSMZEG00005010836	sf3b3	100	96.795	ENSPKIG00000002712	sf3b3	100	96.795	Paramormyrops_kingsleyae
ENSMZEG00005010836	sf3b3	97	90.064	ENSPSIG00000002232	SF3B3	100	92.916	Pelodiscus_sinensis
ENSMZEG00005010836	sf3b3	100	93.016	ENSPEMG00000008603	Sf3b3	100	93.016	Peromyscus_maniculatus_bairdii
ENSMZEG00005010836	sf3b3	100	90.551	ENSPMAG00000001793	sf3b3	100	90.551	Petromyzon_marinus
ENSMZEG00005010836	sf3b3	100	93.262	ENSPCIG00000014927	SF3B3	100	93.262	Phascolarctos_cinereus
ENSMZEG00005010836	sf3b3	100	98.192	ENSPFOG00000015516	sf3b3	100	98.192	Poecilia_formosa
ENSMZEG00005010836	sf3b3	100	98.192	ENSPLAG00000014330	sf3b3	100	98.192	Poecilia_latipinna
ENSMZEG00005010836	sf3b3	100	98.274	ENSPMEG00000019856	sf3b3	100	98.274	Poecilia_mexicana
ENSMZEG00005010836	sf3b3	82	98.420	ENSPREG00000019669	sf3b3	97	98.374	Poecilia_reticulata
ENSMZEG00005010836	sf3b3	95	97.297	ENSPPYG00000007539	SF3B3	100	93.284	Pongo_abelii
ENSMZEG00005010836	sf3b3	100	72.555	ENSPCAG00000002623	SF3B3	100	72.555	Procavia_capensis
ENSMZEG00005010836	sf3b3	84	96.262	ENSPCOG00000026582	SF3B3	100	96.262	Propithecus_coquereli
ENSMZEG00005010836	sf3b3	100	93.098	ENSPVAG00000000684	SF3B3	100	93.098	Pteropus_vampyrus
ENSMZEG00005010836	sf3b3	100	99.918	ENSPNYG00000003528	sf3b3	100	99.918	Pundamilia_nyererei
ENSMZEG00005010836	sf3b3	100	97.206	ENSPNAG00000015419	sf3b3	100	97.206	Pygocentrus_nattereri
ENSMZEG00005010836	sf3b3	100	93.016	ENSRNOG00000017724	Sf3b3	100	93.016	Rattus_norvegicus
ENSMZEG00005010836	sf3b3	100	93.098	ENSRBIG00000021904	SF3B3	100	93.098	Rhinopithecus_bieti
ENSMZEG00005010836	sf3b3	100	93.098	ENSRROG00000045703	SF3B3	100	93.098	Rhinopithecus_roxellana
ENSMZEG00005010836	sf3b3	81	41.935	YML049C	-	75	41.935	Saccharomyces_cerevisiae
ENSMZEG00005010836	sf3b3	100	93.098	ENSSBOG00000029156	SF3B3	100	93.098	Saimiri_boliviensis_boliviensis
ENSMZEG00005010836	sf3b3	100	93.262	ENSSHAG00000000372	SF3B3	100	93.262	Sarcophilus_harrisii
ENSMZEG00005010836	sf3b3	100	96.960	ENSSFOG00015012877	sf3b3	100	96.960	Scleropages_formosus
ENSMZEG00005010836	sf3b3	100	97.371	ENSSMAG00000014386	sf3b3	100	97.371	Scophthalmus_maximus
ENSMZEG00005010836	sf3b3	100	98.850	ENSSDUG00000021201	sf3b3	100	98.850	Seriola_dumerili
ENSMZEG00005010836	sf3b3	100	98.850	ENSSLDG00000017532	sf3b3	100	98.850	Seriola_lalandi_dorsalis
ENSMZEG00005010836	sf3b3	93	92.923	ENSSARG00000006917	SF3B3	93	92.923	Sorex_araneus
ENSMZEG00005010836	sf3b3	100	92.933	ENSSPUG00000006253	SF3B3	100	92.933	Sphenodon_punctatus
ENSMZEG00005010836	sf3b3	100	90.797	ENSSPAG00000003125	sf3b3	100	90.797	Stegastes_partitus
ENSMZEG00005010836	sf3b3	100	93.284	ENSSSCG00000025323	SF3B3	100	93.284	Sus_scrofa
ENSMZEG00005010836	sf3b3	100	93.021	ENSTGUG00000006082	SF3B3	100	93.021	Taeniopygia_guttata
ENSMZEG00005010836	sf3b3	55	85.738	ENSTRUG00000015623	sf3b3	96	80.728	Takifugu_rubripes
ENSMZEG00005010836	sf3b3	89	97.794	ENSTNIG00000004857	sf3b3	100	97.794	Tetraodon_nigroviridis
ENSMZEG00005010836	sf3b3	93	79.049	ENSTBEG00000002946	SF3B3	100	79.049	Tupaia_belangeri
ENSMZEG00005010836	sf3b3	100	92.358	ENSTTRG00000005855	SF3B3	100	92.358	Tursiops_truncatus
ENSMZEG00005010836	sf3b3	100	93.180	ENSUAMG00000006780	SF3B3	100	93.180	Ursus_americanus
ENSMZEG00005010836	sf3b3	100	93.180	ENSUMAG00000017757	SF3B3	100	93.180	Ursus_maritimus
ENSMZEG00005010836	sf3b3	100	78.061	ENSVPAG00000003202	SF3B3	100	78.061	Vicugna_pacos
ENSMZEG00005010836	sf3b3	100	93.180	ENSVVUG00000017922	SF3B3	100	93.180	Vulpes_vulpes
ENSMZEG00005010836	sf3b3	100	93.426	ENSXETG00000032869	SF3B3	100	93.426	Xenopus_tropicalis
ENSMZEG00005010836	sf3b3	78	98.578	ENSXCOG00000013628	sf3b3	97	98.620	Xiphophorus_couchianus
ENSMZEG00005010836	sf3b3	100	98.192	ENSXMAG00000006334	sf3b3	100	98.192	Xiphophorus_maculatus