EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005010956 (Gene tree)
Gene ID: 101470621
Gene Symbol: si:ch1073-55a19.2
Alias: -
Full Name: E3 SUMO-protein ligase RanBP2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 22781 bases
Position: chrLG16:23917017-23939797
Accession: 101470621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014581	zf-RanBP	PF00641.18	7.8e-42	1	5
ENSMZEP00005014581	zf-RanBP	PF00641.18	7.8e-42	2	5
ENSMZEP00005014581	zf-RanBP	PF00641.18	7.8e-42	3	5
ENSMZEP00005014581	zf-RanBP	PF00641.18	7.8e-42	4	5
ENSMZEP00005014581	zf-RanBP	PF00641.18	7.8e-42	5	5
ENSMZEP00005014563	zf-RanBP	PF00641.18	8.2e-42	1	5
ENSMZEP00005014563	zf-RanBP	PF00641.18	8.2e-42	2	5
ENSMZEP00005014563	zf-RanBP	PF00641.18	8.2e-42	3	5
ENSMZEP00005014563	zf-RanBP	PF00641.18	8.2e-42	4	5
ENSMZEP00005014563	zf-RanBP	PF00641.18	8.2e-42	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005015046	-	10126	XM_004555591	ENSMZEP00005014563	3055 (aa)	XP_004555648	UPI000D328370
ENSMZET00005015064	-	10048	XM_004555593	ENSMZEP00005014581	3029 (aa)	XP_004555650	UPI000D3221EB

Gene Model

Click here to download ENSMZEG00005010956's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005010956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSG00000153201	RANBP2	90	71.739	Homo_sapiens
ENSMZEG00005010956	si:ch1073-55a19.2	100	83.514	ENSAPOG00000017146	si:ch1073-55a19.2	100	83.383	Acanthochromis_polyacanthus
ENSMZEG00005010956	si:ch1073-55a19.2	99	51.174	ENSAMEG00000013078	RANBP2	100	51.198	Ailuropoda_melanoleuca
ENSMZEG00005010956	si:ch1073-55a19.2	100	81.976	ENSACIG00000001203	si:ch1073-55a19.2	100	79.756	Amphilophus_citrinellus
ENSMZEG00005010956	si:ch1073-55a19.2	100	84.402	ENSAPEG00000012495	si:ch1073-55a19.2	100	84.402	Amphiprion_percula
ENSMZEG00005010956	si:ch1073-55a19.2	100	80.414	ENSATEG00000001716	si:ch1073-55a19.2	100	80.644	Anabas_testudineus
ENSMZEG00005010956	si:ch1073-55a19.2	95	51.230	ENSACAG00000002091	RANBP2	100	51.417	Anolis_carolinensis
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.336	ENSANAG00000023124	RANBP2	100	50.523	Aotus_nancymaae
ENSMZEG00005010956	si:ch1073-55a19.2	100	99.902	ENSACLG00000020500	si:ch1073-55a19.2	100	99.902	Astatotilapia_calliptera
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.790	ENSBTAG00000000152	RANBP2	100	51.725	Bos_taurus
ENSMZEG00005010956	si:ch1073-55a19.2	100	59.848	ENSCJAG00000001189	RANBP2	70	58.993	Callithrix_jacchus
ENSMZEG00005010956	si:ch1073-55a19.2	99	75.817	ENSCAFG00000023061	RANBP2	100	75.817	Canis_familiaris
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSCAFG00020009314	RANBP2	100	59.712	Canis_lupus_dingo
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.886	ENSCHIG00000012686	RANBP2	100	51.665	Capra_hircus
ENSMZEG00005010956	si:ch1073-55a19.2	99	51.600	ENSTSYG00000001656	RANBP2	63	51.403	Carlito_syrichta
ENSMZEG00005010956	si:ch1073-55a19.2	99	54.545	ENSCAPG00000010687	RANBP2	100	54.037	Cavia_aperea
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.061	ENSCPOG00000000392	RANBP2	100	54.037	Cavia_porcellus
ENSMZEG00005010956	si:ch1073-55a19.2	100	59.848	ENSCCAG00000028166	RANBP2	100	58.993	Cebus_capucinus
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSCATG00000032597	RANBP2	100	59.712	Cercocebus_atys
ENSMZEG00005010956	si:ch1073-55a19.2	100	52.018	ENSCLAG00000010533	RANBP2	63	51.713	Chinchilla_lanigera
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSCSAG00000017019	RANBP2	100	59.712	Chlorocebus_sabaeus
ENSMZEG00005010956	si:ch1073-55a19.2	62	64.286	ENSCHOG00000012659	-	58	66.000	Choloepus_hoffmanni
ENSMZEG00005010956	si:ch1073-55a19.2	100	53.350	ENSCPBG00000006985	RANBP2	100	53.350	Chrysemys_picta_bellii
ENSMZEG00005010956	si:ch1073-55a19.2	97	51.685	ENSCANG00000041469	RANBP2	100	51.544	Colobus_angolensis_palliatus
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.812	ENSCGRG00001000642	Ranbp2	100	50.942	Cricetulus_griseus_chok1gshd
ENSMZEG00005010956	si:ch1073-55a19.2	100	50.884	ENSCGRG00000008995	Ranbp2	100	50.942	Cricetulus_griseus_crigri
ENSMZEG00005010956	si:ch1073-55a19.2	100	71.932	ENSCSEG00000013280	si:ch1073-55a19.2	100	71.834	Cynoglossus_semilaevis
ENSMZEG00005010956	si:ch1073-55a19.2	100	73.420	ENSCVAG00000016050	si:ch1073-55a19.2	100	73.420	Cyprinodon_variegatus
ENSMZEG00005010956	si:ch1073-55a19.2	100	56.854	ENSDARG00000093125	RANBP2	100	56.615	Danio_rerio
ENSMZEG00005010956	si:ch1073-55a19.2	99	50.438	ENSDNOG00000040501	RANBP2	99	50.469	Dasypus_novemcinctus
ENSMZEG00005010956	si:ch1073-55a19.2	100	52.371	ENSDORG00000002206	Ranbp2	100	51.749	Dipodomys_ordii
ENSMZEG00005010956	si:ch1073-55a19.2	74	58.993	ENSETEG00000008891	-	66	58.993	Echinops_telfairi
ENSMZEG00005010956	si:ch1073-55a19.2	87	54.891	ENSEBUG00000010057	si:ch1073-55a19.2	83	68.852	Eptatretus_burgeri
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSEASG00005012918	RANBP2	100	59.712	Equus_asinus_asinus
ENSMZEG00005010956	si:ch1073-55a19.2	97	55.387	ENSECAG00000008458	RANBP2	96	59.712	Equus_caballus
ENSMZEG00005010956	si:ch1073-55a19.2	81	63.927	ENSEEUG00000007806	RANBP2	67	63.927	Erinaceus_europaeus
ENSMZEG00005010956	si:ch1073-55a19.2	99	69.742	ENSELUG00000007763	si:ch1073-55a19.2	94	70.851	Esox_lucius
ENSMZEG00005010956	si:ch1073-55a19.2	99	58.993	ENSFALG00000003519	RANBP2	99	51.504	Ficedula_albicollis
ENSMZEG00005010956	si:ch1073-55a19.2	100	49.969	ENSFDAG00000016912	RANBP2	100	50.806	Fukomys_damarensis
ENSMZEG00005010956	si:ch1073-55a19.2	100	76.152	ENSFHEG00000009774	si:ch1073-55a19.2	100	76.190	Fundulus_heteroclitus
ENSMZEG00005010956	si:ch1073-55a19.2	99	63.895	ENSGMOG00000007071	si:ch1073-55a19.2	96	64.299	Gadus_morhua
ENSMZEG00005010956	si:ch1073-55a19.2	100	75.906	ENSGAFG00000010966	si:ch1073-55a19.2	100	76.037	Gambusia_affinis
ENSMZEG00005010956	si:ch1073-55a19.2	100	74.613	ENSGACG00000006831	si:ch1073-55a19.2	100	74.572	Gasterosteus_aculeatus
ENSMZEG00005010956	si:ch1073-55a19.2	94	50.984	ENSGAGG00000025039	RANBP2	99	54.498	Gopherus_agassizii
ENSMZEG00005010956	si:ch1073-55a19.2	100	99.307	ENSHBUG00000000053	si:ch1073-55a19.2	100	99.307	Haplochromis_burtoni
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.355	ENSHGLG00000018887	RANBP2	100	51.158	Heterocephalus_glaber_female
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.062	ENSHGLG00100007365	RANBP2	100	50.775	Heterocephalus_glaber_male
ENSMZEG00005010956	si:ch1073-55a19.2	52	68.039	ENSHCOG00000019596	si:ch1073-55a19.2	100	72.416	Hippocampus_comes
ENSMZEG00005010956	si:ch1073-55a19.2	100	57.345	ENSIPUG00000019614	si:ch1073-55a19.2	99	57.876	Ictalurus_punctatus
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.186	ENSSTOG00000019518	RANBP2	100	50.573	Ictidomys_tridecemlineatus
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.586	ENSJJAG00000021292	Ranbp2	100	51.863	Jaculus_jaculus
ENSMZEG00005010956	si:ch1073-55a19.2	100	79.483	ENSKMAG00000001158	si:ch1073-55a19.2	100	79.483	Kryptolebias_marmoratus
ENSMZEG00005010956	si:ch1073-55a19.2	94	78.614	ENSLBEG00000027979	si:ch1073-55a19.2	99	78.420	Labrus_bergylta
ENSMZEG00005010956	si:ch1073-55a19.2	100	52.922	ENSLACG00000009728	RANBP2	100	52.811	Latimeria_chalumnae
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.825	ENSLOCG00000010333	si:ch1073-55a19.2	100	60.858	Lepisosteus_oculatus
ENSMZEG00005010956	si:ch1073-55a19.2	100	52.416	ENSLAFG00000000740	RANBP2	55	52.143	Loxodonta_africana
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSMFAG00000029029	RANBP2	100	59.712	Macaca_fascicularis
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSMMUG00000021019	RANBP2	100	59.712	Macaca_mulatta
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSMNEG00000043706	RANBP2	100	59.712	Macaca_nemestrina
ENSMZEG00005010956	si:ch1073-55a19.2	99	60.606	ENSMLEG00000037350	RANBP2	100	59.712	Mandrillus_leucophaeus
ENSMZEG00005010956	si:ch1073-55a19.2	100	78.857	ENSMAMG00000017900	si:ch1073-55a19.2	100	79.344	Mastacembelus_armatus
ENSMZEG00005010956	si:ch1073-55a19.2	99	50.302	ENSMGAG00000014831	-	99	50.143	Meleagris_gallopavo
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.847	ENSMAUG00000013313	Ranbp2	100	51.609	Mesocricetus_auratus
ENSMZEG00005010956	si:ch1073-55a19.2	100	58.696	ENSMICG00000011864	RANBP2	100	58.696	Microcebus_murinus
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.328	ENSMOCG00000012516	Ranbp2	63	51.444	Microtus_ochrogaster
ENSMZEG00005010956	si:ch1073-55a19.2	97	83.969	ENSMMOG00000005743	si:ch1073-55a19.2	99	83.969	Mola_mola
ENSMZEG00005010956	si:ch1073-55a19.2	99	54.753	ENSMODG00000002914	RANBP2	100	54.658	Monodelphis_domestica
ENSMZEG00005010956	si:ch1073-55a19.2	100	79.760	ENSMALG00000004359	si:ch1073-55a19.2	100	79.987	Monopterus_albus
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.541	ENSMUSG00000003226	Ranbp2	100	50.887	Mus_musculus
ENSMZEG00005010956	si:ch1073-55a19.2	100	50.844	MGP_PahariEiJ_G0030751	Ranbp2	63	50.249	Mus_pahari
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.525	MGP_SPRETEiJ_G0016147	Ranbp2	100	50.942	Mus_spretus
ENSMZEG00005010956	si:ch1073-55a19.2	100	65.957	ENSMPUG00000010754	RANBP2	100	62.963	Mustela_putorius_furo
ENSMZEG00005010956	si:ch1073-55a19.2	99	50.355	ENSMLUG00000005555	RANBP2	100	56.250	Myotis_lucifugus
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.446	ENSNGAG00000016154	Ranbp2	53	48.308	Nannospalax_galili
ENSMZEG00005010956	si:ch1073-55a19.2	100	98.351	ENSNBRG00000004587	si:ch1073-55a19.2	100	98.351	Neolamprologus_brichardi
ENSMZEG00005010956	si:ch1073-55a19.2	99	61.364	ENSNLEG00000007501	RANBP2	99	60.432	Nomascus_leucogenys
ENSMZEG00005010956	si:ch1073-55a19.2	92	54.647	ENSOPRG00000009720	-	94	54.647	Ochotona_princeps
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.546	ENSODEG00000013212	RANBP2	100	50.667	Octodon_degus
ENSMZEG00005010956	si:ch1073-55a19.2	100	92.864	ENSONIG00000004346	si:ch1073-55a19.2	100	92.695	Oreochromis_niloticus
ENSMZEG00005010956	si:ch1073-55a19.2	79	50.793	ENSOANG00000004894	RANBP2	100	52.015	Ornithorhynchus_anatinus
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.840	ENSOCUG00000001165	RANBP2	100	51.919	Oryctolagus_cuniculus
ENSMZEG00005010956	si:ch1073-55a19.2	100	71.369	ENSORLG00000015523	si:ch1073-55a19.2	100	71.437	Oryzias_latipes
ENSMZEG00005010956	si:ch1073-55a19.2	100	74.568	ENSORLG00020003797	si:ch1073-55a19.2	100	74.731	Oryzias_latipes_hni
ENSMZEG00005010956	si:ch1073-55a19.2	100	74.275	ENSORLG00015004994	si:ch1073-55a19.2	100	74.372	Oryzias_latipes_hsok
ENSMZEG00005010956	si:ch1073-55a19.2	100	74.267	ENSOMEG00000022969	si:ch1073-55a19.2	100	74.349	Oryzias_melastigma
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.414	ENSOGAG00000028976	RANBP2	100	59.712	Otolemur_garnettii
ENSMZEG00005010956	si:ch1073-55a19.2	99	51.419	ENSOARG00000000558	RANBP2	99	51.517	Ovis_aries
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSPANG00000000990	RANBP2	100	59.712	Papio_anubis
ENSMZEG00005010956	si:ch1073-55a19.2	94	49.057	ENSPKIG00000021054	-	99	51.825	Paramormyrops_kingsleyae
ENSMZEG00005010956	si:ch1073-55a19.2	100	64.036	ENSPKIG00000010971	RANBP2	100	61.491	Paramormyrops_kingsleyae
ENSMZEG00005010956	si:ch1073-55a19.2	99	52.366	ENSPSIG00000007182	RANBP2	99	52.364	Pelodiscus_sinensis
ENSMZEG00005010956	si:ch1073-55a19.2	93	51.265	ENSPEMG00000021565	Ranbp2	97	53.805	Peromyscus_maniculatus_bairdii
ENSMZEG00005010956	si:ch1073-55a19.2	84	58.088	ENSPMAG00000007195	si:ch1073-55a19.2	100	58.394	Petromyzon_marinus
ENSMZEG00005010956	si:ch1073-55a19.2	100	52.405	ENSPCIG00000013912	RANBP2	100	52.266	Phascolarctos_cinereus
ENSMZEG00005010956	si:ch1073-55a19.2	100	74.630	ENSPFOG00000007377	si:ch1073-55a19.2	100	73.141	Poecilia_formosa
ENSMZEG00005010956	si:ch1073-55a19.2	100	75.527	ENSPLAG00000012373	si:ch1073-55a19.2	100	75.820	Poecilia_latipinna
ENSMZEG00005010956	si:ch1073-55a19.2	100	75.332	ENSPMEG00000005561	si:ch1073-55a19.2	100	75.429	Poecilia_mexicana
ENSMZEG00005010956	si:ch1073-55a19.2	99	83.029	ENSPREG00000013331	si:ch1073-55a19.2	100	71.592	Poecilia_reticulata
ENSMZEG00005010956	si:ch1073-55a19.2	50	62.667	ENSPPYG00000029793	-	99	62.667	Pongo_abelii
ENSMZEG00005010956	si:ch1073-55a19.2	71	60.606	ENSPPYG00000012139	-	100	59.712	Pongo_abelii
ENSMZEG00005010956	si:ch1073-55a19.2	96	65.421	ENSPCAG00000000957	RANBP2	98	65.421	Procavia_capensis
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSPCOG00000008879	RANBP2	99	59.712	Propithecus_coquereli
ENSMZEG00005010956	si:ch1073-55a19.2	97	60.000	ENSPVAG00000003883	RANBP2	94	60.000	Pteropus_vampyrus
ENSMZEG00005010956	si:ch1073-55a19.2	100	99.340	ENSPNYG00000015971	si:ch1073-55a19.2	100	99.340	Pundamilia_nyererei
ENSMZEG00005010956	si:ch1073-55a19.2	100	63.596	ENSPNAG00000026129	si:ch1073-55a19.2	100	63.207	Pygocentrus_nattereri
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.327	ENSRNOG00000000796	Ranbp2	100	51.351	Rattus_norvegicus
ENSMZEG00005010956	si:ch1073-55a19.2	100	59.848	ENSRBIG00000043515	RANBP2	100	58.993	Rhinopithecus_bieti
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.563	ENSRROG00000026113	RANBP2	100	58.993	Rhinopithecus_roxellana
ENSMZEG00005010956	si:ch1073-55a19.2	100	60.606	ENSSBOG00000035336	RANBP2	100	59.712	Saimiri_boliviensis_boliviensis
ENSMZEG00005010956	si:ch1073-55a19.2	99	52.505	ENSSHAG00000004676	RANBP2	99	52.853	Sarcophilus_harrisii
ENSMZEG00005010956	si:ch1073-55a19.2	100	59.163	ENSSFOG00015023201	RANBP2	100	59.087	Scleropages_formosus
ENSMZEG00005010956	si:ch1073-55a19.2	99	61.908	ENSSFOG00015003943	-	99	64.687	Scleropages_formosus
ENSMZEG00005010956	si:ch1073-55a19.2	100	80.236	ENSSMAG00000007331	si:ch1073-55a19.2	100	80.203	Scophthalmus_maximus
ENSMZEG00005010956	si:ch1073-55a19.2	100	83.013	ENSSDUG00000013160	si:ch1073-55a19.2	100	83.013	Seriola_dumerili
ENSMZEG00005010956	si:ch1073-55a19.2	100	79.002	ENSSLDG00000023392	si:ch1073-55a19.2	100	79.035	Seriola_lalandi_dorsalis
ENSMZEG00005010956	si:ch1073-55a19.2	93	58.312	ENSSARG00000005595	RANBP2	73	58.312	Sorex_araneus
ENSMZEG00005010956	si:ch1073-55a19.2	100	84.120	ENSSPAG00000008000	si:ch1073-55a19.2	100	83.957	Stegastes_partitus
ENSMZEG00005010956	si:ch1073-55a19.2	100	56.116	ENSSSCG00000008136	RANBP2	98	56.116	Sus_scrofa
ENSMZEG00005010956	si:ch1073-55a19.2	97	58.273	ENSTGUG00000009571	RANBP2	100	58.273	Taeniopygia_guttata
ENSMZEG00005010956	si:ch1073-55a19.2	95	53.132	ENSTTRG00000007400	RANBP2	96	58.993	Tursiops_truncatus
ENSMZEG00005010956	si:ch1073-55a19.2	95	50.472	ENSUAMG00000020025	RANBP2	99	59.712	Ursus_americanus
ENSMZEG00005010956	si:ch1073-55a19.2	97	57.778	ENSVPAG00000006676	RANBP2	88	52.632	Vicugna_pacos
ENSMZEG00005010956	si:ch1073-55a19.2	100	51.506	ENSVVUG00000014899	RANBP2	100	51.915	Vulpes_vulpes
ENSMZEG00005010956	si:ch1073-55a19.2	94	50.519	ENSXETG00000016006	ranbp2	99	50.585	Xenopus_tropicalis
ENSMZEG00005010956	si:ch1073-55a19.2	99	71.922	ENSXCOG00000000752	si:ch1073-55a19.2	99	72.078	Xiphophorus_couchianus
ENSMZEG00005010956	si:ch1073-55a19.2	99	82.952	ENSXMAG00000003519	si:ch1073-55a19.2	100	74.775	Xiphophorus_maculatus