EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005010957 (Gene tree)
Gene ID: -
Gene Symbol: chd1
Alias: fc26h11|fk85d05|si:dkey-106m21.4|wu:fc26h11|wu:fk85d05|zgc:173506
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 19524 bases
Position: chrLG7:57329789-57349312
Accession: 101476485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014593	ResIII	PF04851.15	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005015076	-	3981	XM_004564578	ENSMZEP00005014593	1326 (aa)	XP_004564635	-

Gene Model

Click here to download ENSMZEG00005010957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005010957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005010957	chd1	89	83.572	ENSG00000153922	CHD1	72	80.565	Homo_sapiens
ENSMZEG00005010957	chd1	87	92.513	ENSAPOG00000005764	chd1	98	92.752	Acanthochromis_polyacanthus
ENSMZEG00005010957	chd1	94	91.633	ENSAOCG00000023105	chd1	79	91.780	Amphiprion_ocellaris
ENSMZEG00005010957	chd1	94	93.073	ENSAPEG00000013544	chd1	79	93.222	Amphiprion_percula
ENSMZEG00005010957	chd1	94	86.185	ENSAMXG00000010843	chd1	95	85.060	Astyanax_mexicanus
ENSMZEG00005010957	chd1	94	80.287	ENSCATG00000032035	CHD1	73	80.403	Cercocebus_atys
ENSMZEG00005010957	chd1	94	80.287	ENSCSAG00000015339	CHD1	72	80.403	Chlorocebus_sabaeus
ENSMZEG00005010957	chd1	67	78.523	ENSCPBG00000015831	CHD1	88	78.135	Chrysemys_picta_bellii
ENSMZEG00005010957	chd1	89	80.792	ENSCANG00000036916	CHD1	72	77.742	Colobus_angolensis_palliatus
ENSMZEG00005010957	chd1	94	80.240	ENSCGRG00001023943	Chd1	69	83.151	Cricetulus_griseus_chok1gshd
ENSMZEG00005010957	chd1	94	80.240	ENSCGRG00000008652	Chd1	69	83.151	Cricetulus_griseus_crigri
ENSMZEG00005010957	chd1	94	89.155	ENSCSEG00000009553	chd1	79	89.075	Cynoglossus_semilaevis
ENSMZEG00005010957	chd1	94	80.336	ENSEASG00005016110	CHD1	84	83.249	Equus_asinus_asinus
ENSMZEG00005010957	chd1	92	87.123	ENSELUG00000017677	chd1	75	87.205	Esox_lucius
ENSMZEG00005010957	chd1	97	84.992	ENSFHEG00000021164	chd1	91	88.496	Fundulus_heteroclitus
ENSMZEG00005010957	chd1	91	89.003	ENSGMOG00000001537	chd1	69	88.804	Gadus_morhua
ENSMZEG00005010957	chd1	95	79.150	ENSGALG00000031327	-	73	81.918	Gallus_gallus
ENSMZEG00005010957	chd1	87	92.780	ENSGAFG00000019880	chd1	73	92.780	Gambusia_affinis
ENSMZEG00005010957	chd1	94	76.898	ENSGGOG00000011463	CHD1	72	76.148	Gorilla_gorilla
ENSMZEG00005010957	chd1	94	91.342	ENSHCOG00000014222	chd1	78	91.488	Hippocampus_comes
ENSMZEG00005010957	chd1	94	88.325	ENSIPUG00000001369	chd1	78	87.611	Ictalurus_punctatus
ENSMZEG00005010957	chd1	69	80.263	ENSLAFG00000023183	CHD1	83	81.042	Loxodonta_africana
ENSMZEG00005010957	chd1	94	80.287	ENSMFAG00000031226	CHD1	73	80.403	Macaca_fascicularis
ENSMZEG00005010957	chd1	95	79.637	ENSMMUG00000014090	CHD1	87	79.745	Macaca_mulatta
ENSMZEG00005010957	chd1	94	80.287	ENSMNEG00000045073	CHD1	73	80.403	Macaca_nemestrina
ENSMZEG00005010957	chd1	94	74.860	ENSMLEG00000041096	CHD1	72	75.726	Mandrillus_leucophaeus
ENSMZEG00005010957	chd1	91	80.897	ENSMOCG00000019121	Chd1	68	84.183	Microtus_ochrogaster
ENSMZEG00005010957	chd1	56	80.501	ENSMODG00000019266	-	96	82.177	Monodelphis_domestica
ENSMZEG00005010957	chd1	92	92.921	ENSMALG00000013317	chd1	87	92.042	Monopterus_albus
ENSMZEG00005010957	chd1	89	83.151	MGP_CAROLIEiJ_G0021099	Chd1	78	86.557	Mus_caroli
ENSMZEG00005010957	chd1	89	83.319	ENSMUSG00000023852	Chd1	78	86.557	Mus_musculus
ENSMZEG00005010957	chd1	89	82.982	MGP_PahariEiJ_G0023414	Chd1	78	86.439	Mus_pahari
ENSMZEG00005010957	chd1	96	98.216	ENSNBRG00000006860	chd1	82	98.216	Neolamprologus_brichardi
ENSMZEG00005010957	chd1	94	80.640	ENSNLEG00000014493	CHD1	72	80.565	Nomascus_leucogenys
ENSMZEG00005010957	chd1	93	81.745	ENSOANG00000004891	CHD1	75	84.632	Ornithorhynchus_anatinus
ENSMZEG00005010957	chd1	69	87.378	ENSORLG00015016725	chd1	83	89.831	Oryzias_latipes_hsok
ENSMZEG00005010957	chd1	94	79.316	ENSPPAG00000043367	CHD1	73	79.150	Pan_paniscus
ENSMZEG00005010957	chd1	94	80.560	ENSPTRG00000017103	CHD1	73	80.484	Pan_troglodytes
ENSMZEG00005010957	chd1	94	80.287	ENSPANG00000006387	CHD1	73	80.403	Papio_anubis
ENSMZEG00005010957	chd1	92	81.092	ENSPKIG00000024719	chd1	73	80.522	Paramormyrops_kingsleyae
ENSMZEG00005010957	chd1	91	92.168	ENSPMGG00000005785	chd1	91	92.168	Periophthalmus_magnuspinnatus
ENSMZEG00005010957	chd1	89	83.067	ENSPEMG00000015939	Chd1	70	83.067	Peromyscus_maniculatus_bairdii
ENSMZEG00005010957	chd1	54	90.476	ENSPLAG00000006473	-	73	90.476	Poecilia_latipinna
ENSMZEG00005010957	chd1	92	89.641	ENSPREG00000004209	chd1	74	89.487	Poecilia_reticulata
ENSMZEG00005010957	chd1	90	82.583	ENSRNOG00000014434	Chd1	84	82.583	Rattus_norvegicus
ENSMZEG00005010957	chd1	91	81.177	ENSRBIG00000044325	CHD1	69	83.666	Rhinopithecus_bieti
ENSMZEG00005010957	chd1	94	80.431	ENSRROG00000001726	CHD1	70	83.067	Rhinopithecus_roxellana
ENSMZEG00005010957	chd1	94	84.202	ENSSFOG00015007161	chd1	93	83.792	Scleropages_formosus
ENSMZEG00005010957	chd1	93	93.296	ENSSDUG00000018314	chd1	87	93.296	Seriola_dumerili
ENSMZEG00005010957	chd1	68	92.159	ENSSLDG00000017244	chd1	93	92.159	Seriola_lalandi_dorsalis
ENSMZEG00005010957	chd1	92	94.935	ENSSPAG00000007024	chd1	87	94.935	Stegastes_partitus
ENSMZEG00005010957	chd1	93	81.335	ENSSSCG00000014177	CHD1	84	81.532	Sus_scrofa
ENSMZEG00005010957	chd1	92	88.380	ENSTRUG00000010282	chd1	72	89.116	Takifugu_rubripes
ENSMZEG00005010957	chd1	83	90.984	ENSTNIG00000007101	chd1	86	90.027	Tetraodon_nigroviridis
ENSMZEG00005010957	chd1	97	83.152	ENSXCOG00000017184	chd1	74	86.382	Xiphophorus_couchianus
ENSMZEG00005010957	chd1	89	91.201	ENSXMAG00000014538	chd1	87	91.201	Xiphophorus_maculatus