EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005011027 (Gene tree)
Gene ID: 101472776
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 20058 bases
Position: chrLG1:14703370-14723427
Accession: 101472776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014657	Urb2	PF10441.9	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005015140	-	5740	XM_004539485	ENSMZEP00005014657	1651 (aa)	XP_004539542	UPI000329EE4A

Gene Model

Click here to download ENSMZEG00005011027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005011027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005011027	urb2	99	35.246	ENSG00000135763	URB2	99	59.524	Homo_sapiens
ENSMZEG00005011027	urb2	91	71.717	ENSAPOG00000000608	urb2	100	71.717	Acanthochromis_polyacanthus
ENSMZEG00005011027	urb2	96	51.852	ENSAMEG00000009206	URB2	99	51.852	Ailuropoda_melanoleuca
ENSMZEG00005011027	urb2	100	73.341	ENSAOCG00000019961	urb2	100	73.341	Amphiprion_ocellaris
ENSMZEG00005011027	urb2	100	73.460	ENSAPEG00000005263	urb2	100	73.460	Amphiprion_percula
ENSMZEG00005011027	urb2	100	69.104	ENSATEG00000020930	urb2	100	69.163	Anabas_testudineus
ENSMZEG00005011027	urb2	93	46.341	ENSAPLG00000002998	URB2	99	46.341	Anas_platyrhynchos
ENSMZEG00005011027	urb2	96	56.173	ENSACAG00000001285	URB2	99	56.173	Anolis_carolinensis
ENSMZEG00005011027	urb2	99	35.522	ENSANAG00000033963	URB2	99	35.370	Aotus_nancymaae
ENSMZEG00005011027	urb2	91	99.468	ENSACLG00000009254	urb2	100	99.468	Astatotilapia_calliptera
ENSMZEG00005011027	urb2	99	42.052	ENSAMXG00000003474	urb2	99	41.992	Astyanax_mexicanus
ENSMZEG00005011027	urb2	96	53.704	ENSBTAG00000010180	URB2	99	53.704	Bos_taurus
ENSMZEG00005011027	urb2	91	60.714	ENSCJAG00000010968	URB2	99	60.714	Callithrix_jacchus
ENSMZEG00005011027	urb2	96	51.852	ENSCAFG00000012118	URB2	99	51.852	Canis_familiaris
ENSMZEG00005011027	urb2	87	33.837	ENSCAFG00020027217	URB2	95	34.019	Canis_lupus_dingo
ENSMZEG00005011027	urb2	96	53.704	ENSCHIG00000014513	URB2	99	53.704	Capra_hircus
ENSMZEG00005011027	urb2	100	35.388	ENSTSYG00000006924	URB2	100	35.532	Carlito_syrichta
ENSMZEG00005011027	urb2	63	39.646	ENSCPOG00000020777	-	99	39.036	Cavia_porcellus
ENSMZEG00005011027	urb2	96	53.704	ENSCCAG00000023932	URB2	99	53.704	Cebus_capucinus
ENSMZEG00005011027	urb2	99	35.664	ENSCATG00000043366	URB2	99	35.609	Cercocebus_atys
ENSMZEG00005011027	urb2	97	51.829	ENSCLAG00000006268	URB2	99	51.829	Chinchilla_lanigera
ENSMZEG00005011027	urb2	99	35.664	ENSCSAG00000010599	URB2	99	35.609	Chlorocebus_sabaeus
ENSMZEG00005011027	urb2	66	50.000	ENSCHOG00000010163	URB2	70	50.000	Choloepus_hoffmanni
ENSMZEG00005011027	urb2	99	37.427	ENSCPBG00000006191	URB2	99	37.427	Chrysemys_picta_bellii
ENSMZEG00005011027	urb2	97	53.086	ENSCANG00000023711	URB2	99	53.086	Colobus_angolensis_palliatus
ENSMZEG00005011027	urb2	99	34.752	ENSCGRG00001009591	Urb2	99	34.675	Cricetulus_griseus_chok1gshd
ENSMZEG00005011027	urb2	99	34.752	ENSCGRG00000011259	Urb2	99	34.675	Cricetulus_griseus_crigri
ENSMZEG00005011027	urb2	100	53.905	ENSCSEG00000000299	urb2	100	53.905	Cynoglossus_semilaevis
ENSMZEG00005011027	urb2	100	61.224	ENSCVAG00000011011	urb2	100	61.224	Cyprinodon_variegatus
ENSMZEG00005011027	urb2	100	42.728	ENSDARG00000003217	urb2	100	68.932	Danio_rerio
ENSMZEG00005011027	urb2	93	47.107	ENSDNOG00000043064	URB2	99	47.107	Dasypus_novemcinctus
ENSMZEG00005011027	urb2	99	34.245	ENSDORG00000014975	Urb2	99	34.126	Dipodomys_ordii
ENSMZEG00005011027	urb2	95	40.141	ENSETEG00000002869	URB2	95	40.141	Echinops_telfairi
ENSMZEG00005011027	urb2	100	35.757	ENSEASG00005012060	URB2	100	35.879	Equus_asinus_asinus
ENSMZEG00005011027	urb2	93	60.839	ENSECAG00000012338	URB2	100	60.839	Equus_caballus
ENSMZEG00005011027	urb2	92	55.319	ENSEEUG00000002669	URB2	92	55.319	Erinaceus_europaeus
ENSMZEG00005011027	urb2	100	49.106	ENSELUG00000014647	urb2	100	49.136	Esox_lucius
ENSMZEG00005011027	urb2	96	53.086	ENSFCAG00000007662	URB2	99	53.086	Felis_catus
ENSMZEG00005011027	urb2	96	50.000	ENSFALG00000003385	URB2	99	50.000	Ficedula_albicollis
ENSMZEG00005011027	urb2	99	36.228	ENSFDAG00000021079	URB2	99	36.114	Fukomys_damarensis
ENSMZEG00005011027	urb2	100	61.663	ENSFHEG00000010357	urb2	100	61.782	Fundulus_heteroclitus
ENSMZEG00005011027	urb2	96	68.902	ENSGMOG00000012459	urb2	100	68.902	Gadus_morhua
ENSMZEG00005011027	urb2	96	54.268	ENSGALG00000011101	URB2	99	54.268	Gallus_gallus
ENSMZEG00005011027	urb2	97	73.054	ENSGACG00000016179	urb2	100	73.054	Gasterosteus_aculeatus
ENSMZEG00005011027	urb2	96	57.317	ENSGAGG00000021879	URB2	99	57.317	Gopherus_agassizii
ENSMZEG00005011027	urb2	97	52.469	ENSGGOG00000025643	URB2	99	52.469	Gorilla_gorilla
ENSMZEG00005011027	urb2	100	98.243	ENSHBUG00000018469	urb2	100	98.243	Haplochromis_burtoni
ENSMZEG00005011027	urb2	97	34.502	ENSHGLG00000016561	URB2	99	35.009	Heterocephalus_glaber_female
ENSMZEG00005011027	urb2	96	51.613	ENSHGLG00100001838	URB2	99	51.613	Heterocephalus_glaber_male
ENSMZEG00005011027	urb2	100	42.206	ENSIPUG00000020315	urb2	100	42.001	Ictalurus_punctatus
ENSMZEG00005011027	urb2	97	51.235	ENSSTOG00000025323	URB2	99	51.235	Ictidomys_tridecemlineatus
ENSMZEG00005011027	urb2	97	51.852	ENSJJAG00000011998	Urb2	99	51.852	Jaculus_jaculus
ENSMZEG00005011027	urb2	100	64.643	ENSKMAG00000020129	urb2	100	64.405	Kryptolebias_marmoratus
ENSMZEG00005011027	urb2	96	57.229	ENSLACG00000002038	URB2	99	37.330	Latimeria_chalumnae
ENSMZEG00005011027	urb2	96	58.382	ENSLOCG00000015462	urb2	99	43.070	Lepisosteus_oculatus
ENSMZEG00005011027	urb2	99	34.866	ENSLAFG00000012484	URB2	100	34.886	Loxodonta_africana
ENSMZEG00005011027	urb2	99	35.605	ENSMFAG00000039905	URB2	99	35.550	Macaca_fascicularis
ENSMZEG00005011027	urb2	99	35.664	ENSMMUG00000009509	URB2	99	35.609	Macaca_mulatta
ENSMZEG00005011027	urb2	99	35.546	ENSMNEG00000038762	URB2	99	35.491	Macaca_nemestrina
ENSMZEG00005011027	urb2	99	35.781	ENSMLEG00000043252	URB2	99	35.630	Mandrillus_leucophaeus
ENSMZEG00005011027	urb2	100	64.134	ENSMAMG00000020365	urb2	100	64.134	Mastacembelus_armatus
ENSMZEG00005011027	urb2	86	35.929	ENSMGAG00000012073	URB2	95	36.066	Meleagris_gallopavo
ENSMZEG00005011027	urb2	92	58.156	ENSMAUG00000017980	Urb2	99	58.156	Mesocricetus_auratus
ENSMZEG00005011027	urb2	100	35.319	ENSMICG00000033302	URB2	100	35.280	Microcebus_murinus
ENSMZEG00005011027	urb2	97	53.086	ENSMOCG00000020369	Urb2	99	53.086	Microtus_ochrogaster
ENSMZEG00005011027	urb2	100	68.142	ENSMALG00000006529	urb2	100	68.142	Monopterus_albus
ENSMZEG00005011027	urb2	99	34.726	ENSMUSG00000031976	Urb2	99	34.689	Mus_musculus
ENSMZEG00005011027	urb2	96	51.235	ENSMPUG00000012438	URB2	99	51.235	Mustela_putorius_furo
ENSMZEG00005011027	urb2	99	34.736	ENSNGAG00000016524	Urb2	99	34.955	Nannospalax_galili
ENSMZEG00005011027	urb2	99	34.979	ENSNLEG00000014450	URB2	99	35.079	Nomascus_leucogenys
ENSMZEG00005011027	urb2	86	47.541	ENSMEUG00000016434	URB2	92	47.541	Notamacropus_eugenii
ENSMZEG00005011027	urb2	85	76.190	ENSOPRG00000009906	URB2	84	76.190	Ochotona_princeps
ENSMZEG00005011027	urb2	99	35.540	ENSODEG00000005593	URB2	99	35.565	Octodon_degus
ENSMZEG00005011027	urb2	99	94.706	ENSONIG00000017078	urb2	100	94.706	Oreochromis_niloticus
ENSMZEG00005011027	urb2	95	51.250	ENSOANG00000013732	URB2	99	33.654	Ornithorhynchus_anatinus
ENSMZEG00005011027	urb2	97	52.469	ENSOCUG00000010700	URB2	100	35.497	Oryctolagus_cuniculus
ENSMZEG00005011027	urb2	100	61.763	ENSORLG00000010915	urb2	100	61.882	Oryzias_latipes
ENSMZEG00005011027	urb2	100	61.942	ENSORLG00020003361	urb2	100	61.942	Oryzias_latipes_hni
ENSMZEG00005011027	urb2	100	61.703	ENSORLG00015001534	urb2	100	61.703	Oryzias_latipes_hsok
ENSMZEG00005011027	urb2	100	61.993	ENSOMEG00000010076	urb2	100	62.172	Oryzias_melastigma
ENSMZEG00005011027	urb2	97	51.829	ENSOGAG00000003021	URB2	100	51.829	Otolemur_garnettii
ENSMZEG00005011027	urb2	96	53.704	ENSOARG00000003102	URB2	99	53.704	Ovis_aries
ENSMZEG00005011027	urb2	99	35.149	ENSPPAG00000040629	URB2	99	35.304	Pan_paniscus
ENSMZEG00005011027	urb2	96	53.086	ENSPPRG00000012767	URB2	99	53.086	Panthera_pardus
ENSMZEG00005011027	urb2	89	72.727	ENSPTIG00000012577	URB2	96	72.727	Panthera_tigris_altaica
ENSMZEG00005011027	urb2	99	35.149	ENSPTRG00000002092	URB2	99	35.208	Pan_troglodytes
ENSMZEG00005011027	urb2	99	34.606	ENSPANG00000002245	URB2	99	34.452	Papio_anubis
ENSMZEG00005011027	urb2	99	42.806	ENSPKIG00000005787	urb2	99	42.866	Paramormyrops_kingsleyae
ENSMZEG00005011027	urb2	99	36.792	ENSPSIG00000002690	URB2	99	36.836	Pelodiscus_sinensis
ENSMZEG00005011027	urb2	93	51.235	ENSPEMG00000019551	Urb2	100	51.235	Peromyscus_maniculatus_bairdii
ENSMZEG00005011027	urb2	96	54.375	ENSPCIG00000030071	URB2	99	54.375	Phascolarctos_cinereus
ENSMZEG00005011027	urb2	100	61.502	ENSPFOG00000014330	urb2	100	61.381	Poecilia_formosa
ENSMZEG00005011027	urb2	100	61.478	ENSPLAG00000014654	urb2	100	61.358	Poecilia_latipinna
ENSMZEG00005011027	urb2	100	61.922	ENSPMEG00000012356	urb2	100	61.682	Poecilia_mexicana
ENSMZEG00005011027	urb2	100	61.381	ENSPREG00000010268	urb2	100	61.261	Poecilia_reticulata
ENSMZEG00005011027	urb2	96	53.704	ENSPPYG00000000123	URB2	99	53.704	Pongo_abelii
ENSMZEG00005011027	urb2	97	53.293	ENSPCOG00000023537	URB2	100	53.293	Propithecus_coquereli
ENSMZEG00005011027	urb2	99	33.135	ENSPVAG00000002108	URB2	99	33.135	Pteropus_vampyrus
ENSMZEG00005011027	urb2	91	98.870	ENSPNYG00000016840	urb2	100	98.870	Pundamilia_nyererei
ENSMZEG00005011027	urb2	96	56.364	ENSPNAG00000013684	urb2	99	56.364	Pygocentrus_nattereri
ENSMZEG00005011027	urb2	97	53.086	ENSRNOG00000026853	Urb2	97	53.086	Rattus_norvegicus
ENSMZEG00005011027	urb2	99	35.511	ENSRBIG00000037937	URB2	99	35.515	Rhinopithecus_bieti
ENSMZEG00005011027	urb2	99	35.570	ENSRROG00000039854	URB2	99	35.574	Rhinopithecus_roxellana
ENSMZEG00005011027	urb2	97	53.086	ENSSBOG00000023055	URB2	99	53.086	Saimiri_boliviensis_boliviensis
ENSMZEG00005011027	urb2	96	54.037	ENSSHAG00000014735	URB2	99	54.037	Sarcophilus_harrisii
ENSMZEG00005011027	urb2	98	42.054	ENSSFOG00015015432	urb2	98	41.993	Scleropages_formosus
ENSMZEG00005011027	urb2	91	65.683	ENSSMAG00000004984	urb2	100	65.491	Scophthalmus_maximus
ENSMZEG00005011027	urb2	100	71.228	ENSSDUG00000000902	urb2	100	71.404	Seriola_dumerili
ENSMZEG00005011027	urb2	96	55.488	ENSSPUG00000018549	URB2	99	55.488	Sphenodon_punctatus
ENSMZEG00005011027	urb2	100	72.663	ENSSPAG00000013632	urb2	100	72.544	Stegastes_partitus
ENSMZEG00005011027	urb2	100	35.837	ENSSSCG00000010186	URB2	100	35.744	Sus_scrofa
ENSMZEG00005011027	urb2	96	50.617	ENSTGUG00000009990	URB2	99	50.617	Taeniopygia_guttata
ENSMZEG00005011027	urb2	100	59.775	ENSTRUG00000008173	urb2	100	59.834	Takifugu_rubripes
ENSMZEG00005011027	urb2	91	71.257	ENSTNIG00000017689	urb2	98	71.257	Tetraodon_nigroviridis
ENSMZEG00005011027	urb2	92	76.190	ENSTTRG00000014864	URB2	95	76.190	Tursiops_truncatus
ENSMZEG00005011027	urb2	96	51.553	ENSUAMG00000015022	URB2	99	51.553	Ursus_americanus
ENSMZEG00005011027	urb2	96	51.553	ENSUMAG00000004728	URB2	99	51.553	Ursus_maritimus
ENSMZEG00005011027	urb2	50	62.319	ENSVPAG00000001750	-	51	62.319	Vicugna_pacos
ENSMZEG00005011027	urb2	96	51.852	ENSVVUG00000006747	URB2	99	51.852	Vulpes_vulpes
ENSMZEG00005011027	urb2	99	33.333	ENSXETG00000023331	urb2	99	33.275	Xenopus_tropicalis
ENSMZEG00005011027	urb2	100	60.901	ENSXMAG00000015059	urb2	100	60.781	Xiphophorus_maculatus