EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005011183 (Gene tree)
Gene ID: 101481692
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA-binding protein 25
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 13270 bases
Position: chrLG19:14139402-14152671
Accession: 101481692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005014872	RRM_1	PF00076.22	1.7e-08	1	1
ENSMZEP00005014881	RRM_1	PF00076.22	1.8e-08	1	1
ENSMZEP00005014872	PWI	PF01480.17	1e-13	1	1
ENSMZEP00005014881	PWI	PF01480.17	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005015360	-	2289	-	ENSMZEP00005014872	762 (aa)	-	-
ENSMZET00005015369	-	3996	XM_004539975	ENSMZEP00005014881	819 (aa)	XP_004540032	UPI0006CECACB

Gene Model

Click here to download ENSMZEG00005011183's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005011183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005011183	rbm25a	54	78.554	ENSG00000119707	RBM25	100	67.188	Homo_sapiens
ENSMZEG00005011183	rbm25a	60	89.032	ENSAPOG00000017757	rbm25a	60	88.651	Acanthochromis_polyacanthus
ENSMZEG00005011183	rbm25a	56	75.699	ENSAPOG00000015321	rbm25b	56	78.681	Acanthochromis_polyacanthus
ENSMZEG00005011183	rbm25a	54	78.935	ENSAMEG00000016270	RBM25	79	79.080	Ailuropoda_melanoleuca
ENSMZEG00005011183	rbm25a	57	70.130	ENSACIG00000014178	rbm25b	56	70.563	Amphilophus_citrinellus
ENSMZEG00005011183	rbm25a	57	96.809	ENSACIG00000019482	rbm25a	100	94.934	Amphilophus_citrinellus
ENSMZEG00005011183	rbm25a	57	73.207	ENSAOCG00000019308	rbm25b	56	76.644	Amphiprion_ocellaris
ENSMZEG00005011183	rbm25a	56	91.745	ENSAOCG00000013695	rbm25a	55	91.183	Amphiprion_ocellaris
ENSMZEG00005011183	rbm25a	58	76.151	ENSAPEG00000009666	rbm25b	58	76.872	Amphiprion_percula
ENSMZEG00005011183	rbm25a	100	92.252	ENSAPEG00000007514	rbm25a	56	90.870	Amphiprion_percula
ENSMZEG00005011183	rbm25a	61	73.978	ENSATEG00000017312	rbm25b	58	78.899	Anabas_testudineus
ENSMZEG00005011183	rbm25a	57	93.162	ENSATEG00000020676	rbm25a	63	93.460	Anabas_testudineus
ENSMZEG00005011183	rbm25a	54	79.661	ENSAPLG00000006643	RBM25	54	80.370	Anas_platyrhynchos
ENSMZEG00005011183	rbm25a	54	78.554	ENSANAG00000028295	RBM25	98	65.636	Aotus_nancymaae
ENSMZEG00005011183	rbm25a	99	91.459	ENSACLG00000027482	rbm25a	94	91.459	Astatotilapia_calliptera
ENSMZEG00005011183	rbm25a	57	76.744	ENSACLG00000024359	rbm25b	55	78.242	Astatotilapia_calliptera
ENSMZEG00005011183	rbm25a	53	75.751	ENSAMXG00000024525	rbm25b	55	76.201	Astyanax_mexicanus
ENSMZEG00005011183	rbm25a	54	78.795	ENSBTAG00000017177	RBM25	79	79.080	Bos_taurus
ENSMZEG00005011183	rbm25a	66	58.333	WBGene00012245	W04D2.6	90	32.645	Caenorhabditis_elegans
ENSMZEG00005011183	rbm25a	54	78.795	ENSCJAG00000014441	-	98	65.979	Callithrix_jacchus
ENSMZEG00005011183	rbm25a	54	79.036	ENSTSYG00000003024	RBM25	98	65.979	Carlito_syrichta
ENSMZEG00005011183	rbm25a	54	78.795	ENSCPOG00000002479	RBM25	79	79.080	Cavia_porcellus
ENSMZEG00005011183	rbm25a	54	78.795	ENSCATG00000039651	RBM25	98	65.979	Cercocebus_atys
ENSMZEG00005011183	rbm25a	54	78.795	ENSCLAG00000003977	RBM25	79	79.080	Chinchilla_lanigera
ENSMZEG00005011183	rbm25a	54	78.795	ENSCSAG00000012801	RBM25	79	79.080	Chlorocebus_sabaeus
ENSMZEG00005011183	rbm25a	62	86.486	ENSCHOG00000008903	RBM25	63	86.301	Choloepus_hoffmanni
ENSMZEG00005011183	rbm25a	54	71.325	ENSCANG00000043874	RBM25	98	65.979	Colobus_angolensis_palliatus
ENSMZEG00005011183	rbm25a	63	64.865	ENSCGRG00001020817	Rbm25	95	62.805	Cricetulus_griseus_chok1gshd
ENSMZEG00005011183	rbm25a	55	85.965	ENSCSEG00000009430	rbm25a	56	86.123	Cynoglossus_semilaevis
ENSMZEG00005011183	rbm25a	57	75.917	ENSCSEG00000020737	rbm25b	56	75.055	Cynoglossus_semilaevis
ENSMZEG00005011183	rbm25a	56	69.848	ENSCVAG00000003478	rbm25b	56	72.727	Cyprinodon_variegatus
ENSMZEG00005011183	rbm25a	70	79.579	ENSCVAG00000005498	rbm25a	99	87.052	Cyprinodon_variegatus
ENSMZEG00005011183	rbm25a	53	71.394	ENSDARG00000039266	rbm25a	99	98.734	Danio_rerio
ENSMZEG00005011183	rbm25a	63	79.383	ENSDARG00000006395	rbm25b	57	71.630	Danio_rerio
ENSMZEG00005011183	rbm25a	54	78.554	ENSDNOG00000004959	RBM25	79	78.851	Dasypus_novemcinctus
ENSMZEG00005011183	rbm25a	54	78.795	ENSDORG00000013247	Rbm25	79	79.080	Dipodomys_ordii
ENSMZEG00005011183	rbm25a	85	70.690	FBgn0028474	CG4119	63	72.973	Drosophila_melanogaster
ENSMZEG00005011183	rbm25a	54	77.724	ENSETEG00000015941	RBM25	78	80.278	Echinops_telfairi
ENSMZEG00005011183	rbm25a	70	41.020	ENSEBUG00000002963	rbm25b	66	40.515	Eptatretus_burgeri
ENSMZEG00005011183	rbm25a	82	77.833	ENSEEUG00000007350	RBM25	81	73.302	Erinaceus_europaeus
ENSMZEG00005011183	rbm25a	56	76.168	ENSELUG00000021847	rbm25a	51	74.766	Esox_lucius
ENSMZEG00005011183	rbm25a	57	72.990	ENSELUG00000007730	rbm25b	56	74.573	Esox_lucius
ENSMZEG00005011183	rbm25a	54	78.795	ENSFCAG00000011716	RBM25	98	65.979	Felis_catus
ENSMZEG00005011183	rbm25a	54	78.795	ENSFDAG00000006542	RBM25	79	79.080	Fukomys_damarensis
ENSMZEG00005011183	rbm25a	57	76.471	ENSFHEG00000003513	rbm25b	56	78.289	Fundulus_heteroclitus
ENSMZEG00005011183	rbm25a	100	82.225	ENSFHEG00000005318	rbm25a	58	80.040	Fundulus_heteroclitus
ENSMZEG00005011183	rbm25a	83	77.518	ENSGMOG00000014070	rbm25a	86	79.091	Gadus_morhua
ENSMZEG00005011183	rbm25a	88	71.681	ENSGMOG00000014097	rbm25b	62	63.578	Gadus_morhua
ENSMZEG00005011183	rbm25a	100	83.133	ENSGAFG00000018036	rbm25a	56	83.948	Gambusia_affinis
ENSMZEG00005011183	rbm25a	98	71.259	ENSGAFG00000001092	rbm25b	50	77.273	Gambusia_affinis
ENSMZEG00005011183	rbm25a	54	78.554	ENSGGOG00000002415	RBM25	98	65.979	Gorilla_gorilla
ENSMZEG00005011183	rbm25a	100	99.878	ENSHBUG00000016908	rbm25a	100	99.878	Haplochromis_burtoni
ENSMZEG00005011183	rbm25a	57	77.167	ENSHBUG00000018499	rbm25b	55	78.462	Haplochromis_burtoni
ENSMZEG00005011183	rbm25a	54	78.795	ENSHGLG00000014745	RBM25	79	79.080	Heterocephalus_glaber_female
ENSMZEG00005011183	rbm25a	54	79.177	ENSHGLG00100018236	-	93	73.077	Heterocephalus_glaber_male
ENSMZEG00005011183	rbm25a	99	70.988	ENSHCOG00000000142	rbm25b	55	76.256	Hippocampus_comes
ENSMZEG00005011183	rbm25a	99	71.768	ENSIPUG00000021051	rbm25b	56	75.974	Ictalurus_punctatus
ENSMZEG00005011183	rbm25a	54	78.795	ENSSTOG00000011117	RBM25	79	79.080	Ictidomys_tridecemlineatus
ENSMZEG00005011183	rbm25a	61	81.420	ENSKMAG00000016242	rbm25a	90	83.883	Kryptolebias_marmoratus
ENSMZEG00005011183	rbm25a	56	76.824	ENSKMAG00000018826	rbm25b	55	77.802	Kryptolebias_marmoratus
ENSMZEG00005011183	rbm25a	100	72.859	ENSLBEG00000010667	rbm25b	55	78.161	Labrus_bergylta
ENSMZEG00005011183	rbm25a	54	78.986	ENSLACG00000011845	RBM25	55	76.739	Latimeria_chalumnae
ENSMZEG00005011183	rbm25a	54	76.960	ENSLOCG00000014196	rbm25b	54	77.252	Lepisosteus_oculatus
ENSMZEG00005011183	rbm25a	54	78.795	ENSMFAG00000040040	RBM25	98	65.979	Macaca_fascicularis
ENSMZEG00005011183	rbm25a	54	78.795	ENSMMUG00000002332	RBM25	98	78.630	Macaca_mulatta
ENSMZEG00005011183	rbm25a	54	78.795	ENSMNEG00000032922	RBM25	79	79.080	Macaca_nemestrina
ENSMZEG00005011183	rbm25a	54	78.795	ENSMLEG00000035157	RBM25	98	65.979	Mandrillus_leucophaeus
ENSMZEG00005011183	rbm25a	60	82.213	ENSMAMG00000000165	rbm25a	56	81.957	Mastacembelus_armatus
ENSMZEG00005011183	rbm25a	58	77.035	ENSMAMG00000004524	rbm25b	60	73.868	Mastacembelus_armatus
ENSMZEG00005011183	rbm25a	57	76.744	ENSMZEG00005001453	rbm25b	55	78.242	Maylandia_zebra
ENSMZEG00005011183	rbm25a	54	79.036	ENSMICG00000034082	RBM25	98	65.636	Microcebus_murinus
ENSMZEG00005011183	rbm25a	57	90.115	ENSMMOG00000009065	rbm25a	55	90.115	Mola_mola
ENSMZEG00005011183	rbm25a	100	63.504	ENSMMOG00000015545	rbm25b	61	76.484	Mola_mola
ENSMZEG00005011183	rbm25a	54	79.277	ENSMODG00000006820	RBM25	78	79.540	Monodelphis_domestica
ENSMZEG00005011183	rbm25a	58	84.016	ENSMALG00000020441	rbm25b	86	78.337	Monopterus_albus
ENSMZEG00005011183	rbm25a	54	78.554	MGP_CAROLIEiJ_G0017921	Rbm25	93	73.077	Mus_caroli
ENSMZEG00005011183	rbm25a	54	78.554	ENSMUSG00000010608	Rbm25	93	73.077	Mus_musculus
ENSMZEG00005011183	rbm25a	54	78.554	MGP_PahariEiJ_G0029677	Rbm25	93	73.077	Mus_pahari
ENSMZEG00005011183	rbm25a	54	78.554	MGP_SPRETEiJ_G0018766	-	93	73.077	Mus_spretus
ENSMZEG00005011183	rbm25a	54	78.795	ENSMPUG00000003698	RBM25	81	79.080	Mustela_putorius_furo
ENSMZEG00005011183	rbm25a	55	73.460	ENSMLUG00000024167	-	51	73.563	Myotis_lucifugus
ENSMZEG00005011183	rbm25a	56	74.596	ENSMLUG00000015434	-	52	75.172	Myotis_lucifugus
ENSMZEG00005011183	rbm25a	100	99.756	ENSNBRG00000003761	rbm25a	100	99.756	Neolamprologus_brichardi
ENSMZEG00005011183	rbm25a	54	78.795	ENSNLEG00000002701	RBM25	98	65.979	Nomascus_leucogenys
ENSMZEG00005011183	rbm25a	54	79.518	ENSOANG00000001056	RBM25	77	80.000	Ornithorhynchus_anatinus
ENSMZEG00005011183	rbm25a	99	64.224	ENSOCUG00000013737	RBM25	79	79.310	Oryctolagus_cuniculus
ENSMZEG00005011183	rbm25a	58	75.158	ENSORLG00000011874	rbm25b	55	77.533	Oryzias_latipes
ENSMZEG00005011183	rbm25a	60	75.000	ENSORLG00020016422	rbm25b	55	77.533	Oryzias_latipes_hni
ENSMZEG00005011183	rbm25a	58	75.368	ENSORLG00015011269	rbm25b	55	77.753	Oryzias_latipes_hsok
ENSMZEG00005011183	rbm25a	58	74.895	ENSOMEG00000023172	rbm25b	55	77.533	Oryzias_melastigma
ENSMZEG00005011183	rbm25a	57	83.299	ENSOMEG00000022138	rbm25a	57	83.789	Oryzias_melastigma
ENSMZEG00005011183	rbm25a	54	78.935	ENSOGAG00000014986	RBM25	50	75.000	Otolemur_garnettii
ENSMZEG00005011183	rbm25a	54	78.795	ENSOARG00000000319	RBM25	79	79.080	Ovis_aries
ENSMZEG00005011183	rbm25a	54	78.554	ENSPPAG00000039402	RBM25	98	65.979	Pan_paniscus
ENSMZEG00005011183	rbm25a	54	78.795	ENSPPRG00000017374	RBM25	98	65.979	Panthera_pardus
ENSMZEG00005011183	rbm25a	54	78.795	ENSPTIG00000017309	RBM25	98	65.979	Panthera_tigris_altaica
ENSMZEG00005011183	rbm25a	54	78.554	ENSPTRG00000006509	RBM25	98	65.979	Pan_troglodytes
ENSMZEG00005011183	rbm25a	54	78.795	ENSPANG00000018212	RBM25	98	65.979	Papio_anubis
ENSMZEG00005011183	rbm25a	57	79.036	ENSPKIG00000003203	rbm25b	56	80.131	Paramormyrops_kingsleyae
ENSMZEG00005011183	rbm25a	52	73.000	ENSPMGG00000001791	rbm25a	97	72.414	Periophthalmus_magnuspinnatus
ENSMZEG00005011183	rbm25a	57	75.155	ENSPMGG00000015740	rbm25b	56	75.764	Periophthalmus_magnuspinnatus
ENSMZEG00005011183	rbm25a	54	72.048	ENSPCIG00000011166	RBM25	77	73.103	Phascolarctos_cinereus
ENSMZEG00005011183	rbm25a	58	75.413	ENSPFOG00000018808	rbm25b	55	77.440	Poecilia_formosa
ENSMZEG00005011183	rbm25a	100	82.699	ENSPFOG00000017931	rbm25a	90	87.179	Poecilia_formosa
ENSMZEG00005011183	rbm25a	99	85.337	ENSPLAG00000018338	rbm25a	90	87.179	Poecilia_latipinna
ENSMZEG00005011183	rbm25a	58	75.207	ENSPMEG00000019161	rbm25b	55	77.440	Poecilia_mexicana
ENSMZEG00005011183	rbm25a	99	85.205	ENSPMEG00000024470	rbm25a	90	87.179	Poecilia_mexicana
ENSMZEG00005011183	rbm25a	100	84.512	ENSPREG00000009228	rbm25a	90	87.179	Poecilia_reticulata
ENSMZEG00005011183	rbm25a	58	75.514	ENSPREG00000008522	rbm25b	55	78.402	Poecilia_reticulata
ENSMZEG00005011183	rbm25a	78	78.935	ENSPCAG00000006226	RBM25	73	79.080	Procavia_capensis
ENSMZEG00005011183	rbm25a	54	79.036	ENSPCOG00000023107	RBM25	98	65.979	Propithecus_coquereli
ENSMZEG00005011183	rbm25a	54	78.795	ENSPVAG00000003931	RBM25	79	79.080	Pteropus_vampyrus
ENSMZEG00005011183	rbm25a	99	99.735	ENSPNYG00000022596	rbm25a	94	99.735	Pundamilia_nyererei
ENSMZEG00005011183	rbm25a	53	74.253	ENSPNAG00000012024	rbm25b	56	76.149	Pygocentrus_nattereri
ENSMZEG00005011183	rbm25a	54	78.261	ENSRNOG00000002871	Rbm25l1	52	78.670	Rattus_norvegicus
ENSMZEG00005011183	rbm25a	54	78.795	ENSRBIG00000039904	RBM25	98	65.979	Rhinopithecus_bieti
ENSMZEG00005011183	rbm25a	54	78.795	ENSRROG00000035556	RBM25	96	78.630	Rhinopithecus_roxellana
ENSMZEG00005011183	rbm25a	54	79.277	ENSSHAG00000012859	RBM25	79	79.540	Sarcophilus_harrisii
ENSMZEG00005011183	rbm25a	57	79.661	ENSSFOG00015007093	rbm25	56	81.360	Scleropages_formosus
ENSMZEG00005011183	rbm25a	57	91.702	ENSSMAG00000009745	rbm25a	56	91.904	Scophthalmus_maximus
ENSMZEG00005011183	rbm25a	61	68.000	ENSSMAG00000002520	rbm25b	57	74.784	Scophthalmus_maximus
ENSMZEG00005011183	rbm25a	57	93.590	ENSSDUG00000017984	rbm25a	57	93.846	Seriola_dumerili
ENSMZEG00005011183	rbm25a	57	93.590	ENSSLDG00000010342	rbm25a	56	93.846	Seriola_lalandi_dorsalis
ENSMZEG00005011183	rbm25a	56	76.940	ENSSLDG00000024573	rbm25b	98	78.681	Seriola_lalandi_dorsalis
ENSMZEG00005011183	rbm25a	54	78.795	ENSSARG00000002327	RBM25	79	79.310	Sorex_araneus
ENSMZEG00005011183	rbm25a	61	73.820	ENSSPAG00000016168	rbm25b	56	78.118	Stegastes_partitus
ENSMZEG00005011183	rbm25a	56	85.653	ENSSPAG00000011114	rbm25a	57	85.654	Stegastes_partitus
ENSMZEG00005011183	rbm25a	54	78.795	ENSTGUG00000011246	-	51	79.677	Taeniopygia_guttata
ENSMZEG00005011183	rbm25a	60	74.353	ENSTRUG00000017964	rbm25b	56	76.872	Takifugu_rubripes
ENSMZEG00005011183	rbm25a	56	83.226	ENSTRUG00000003076	rbm25a	59	83.333	Takifugu_rubripes
ENSMZEG00005011183	rbm25a	98	67.355	ENSTNIG00000012222	rbm25b	73	75.378	Tetraodon_nigroviridis
ENSMZEG00005011183	rbm25a	62	79.327	ENSTBEG00000010538	-	56	79.327	Tupaia_belangeri
ENSMZEG00005011183	rbm25a	54	70.843	ENSUAMG00000007707	RBM25	100	76.147	Ursus_americanus
ENSMZEG00005011183	rbm25a	76	77.108	ENSVPAG00000009052	RBM25	77	74.558	Vicugna_pacos
ENSMZEG00005011183	rbm25a	54	78.795	ENSVVUG00000004426	RBM25	77	79.080	Vulpes_vulpes
ENSMZEG00005011183	rbm25a	99	64.917	ENSXETG00000021857	rbm25	55	78.391	Xenopus_tropicalis
ENSMZEG00005011183	rbm25a	99	84.273	ENSXCOG00000004043	RBM25	57	84.335	Xiphophorus_couchianus
ENSMZEG00005011183	rbm25a	97	71.602	ENSXCOG00000002222	rbm25b	56	72.113	Xiphophorus_couchianus
ENSMZEG00005011183	rbm25a	100	71.765	ENSXMAG00000017290	rbm25b	55	77.802	Xiphophorus_maculatus
ENSMZEG00005011183	rbm25a	100	83.431	ENSXMAG00000009077	RBM25	58	81.466	Xiphophorus_maculatus