EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005011904 (Gene tree)
Gene ID
101464473
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Minus strand
Length
14818 bases
Position
chrAGTA05000049.1:407783-422600
Accession
101464473
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005015849RRM_1PF00076.224.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005016359-1333XM_004569542ENSMZEP00005015849284 (aa)XP_004569599UPI00032A340C
Gene Model
Click here to download ENSMZEG00005011904's gene model file
Pathways
Pathway IDPathway NameSource
mze03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005011904's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005011904pabpn16682.474ENSG00000100836PABPN19282.051Homo_sapiens
ENSMZEG00005011904pabpn17671.946ENSG00000258643BCL2L2-PABPN16671.946Homo_sapiens
ENSMZEG00005011904pabpn110098.592ENSAPOG00000016425pabpn110098.592Acanthochromis_polyacanthus
ENSMZEG00005011904pabpn16284.270ENSAMEG00000007048BCL2L2-PABPN19484.270Ailuropoda_melanoleuca
ENSMZEG00005011904pabpn110097.902ENSACIG00000021744pabpn110097.902Amphilophus_citrinellus
ENSMZEG00005011904pabpn17798.636ENSAOCG00000015805pabpn19598.636Amphiprion_ocellaris
ENSMZEG00005011904pabpn17798.636ENSAPEG00000009623pabpn19598.636Amphiprion_percula
ENSMZEG00005011904pabpn17799.091ENSATEG00000020531pabpn19599.091Anabas_testudineus
ENSMZEG00005011904pabpn15986.047ENSACAG00000006185-7672.444Anolis_carolinensis
ENSMZEG00005011904pabpn16483.871ENSANAG00000024513-8075.652Aotus_nancymaae
ENSMZEG00005011904pabpn110097.561ENSACLG00000016374pabpn110097.561Astatotilapia_calliptera
ENSMZEG00005011904pabpn110087.368ENSAMXG00000000452pabpn19597.738Astyanax_mexicanus
ENSMZEG00005011904pabpn16483.871ENSBTAG00000006884PABPN18469.841Bos_taurus
ENSMZEG00005011904pabpn16084.483ENSBTAG00000050594-7679.798Bos_taurus
ENSMZEG00005011904pabpn16283.333ENSBTAG00000053753-6783.333Bos_taurus
ENSMZEG00005011904pabpn15058.904WBGene00003904pabp-28654.696Caenorhabditis_elegans
ENSMZEG00005011904pabpn17775.566ENSCJAG00000007960-7976.018Callithrix_jacchus
ENSMZEG00005011904pabpn15480.128ENSCJAG00000004407-7880.128Callithrix_jacchus
ENSMZEG00005011904pabpn16682.474ENSCAFG00000011482PABPN18270.635Canis_familiaris
ENSMZEG00005011904pabpn16682.474ENSCAFG00020007298-8270.238Canis_lupus_dingo
ENSMZEG00005011904pabpn16682.474ENSCAFG00020006651-8270.238Canis_lupus_dingo
ENSMZEG00005011904pabpn16682.474ENSCHIG00000012184PABPN18270.238Capra_hircus
ENSMZEG00005011904pabpn17671.946ENSTSYG00000033996BCL2L2-PABPN18782.051Carlito_syrichta
ENSMZEG00005011904pabpn16681.959ENSCPOG00000025574PABPN16481.726Cavia_porcellus
ENSMZEG00005011904pabpn17775.566ENSCCAG00000033954BCL2L2-PABPN17976.018Cebus_capucinus
ENSMZEG00005011904pabpn17775.566ENSCATG00000038536BCL2L2-PABPN17976.018Cercocebus_atys
ENSMZEG00005011904pabpn17158.261ENSCLAG00000012423PABPN15282.014Chinchilla_lanigera
ENSMZEG00005011904pabpn16680.928ENSCSAG00000016036PABPN18269.048Chlorocebus_sabaeus
ENSMZEG00005011904pabpn16972.222ENSCHOG00000004798BCL2L2-PABPN18770.192Choloepus_hoffmanni
ENSMZEG00005011904pabpn15483.974ENSCPBG00000026060-8783.974Chrysemys_picta_bellii
ENSMZEG00005011904pabpn15668.098ENSCING00000012468-8464.000Ciona_intestinalis
ENSMZEG00005011904pabpn16472.581ENSCANG00000030980-8364.474Colobus_angolensis_palliatus
ENSMZEG00005011904pabpn17671.946ENSCANG00000009750BCL2L2-PABPN18782.051Colobus_angolensis_palliatus
ENSMZEG00005011904pabpn16681.959ENSCGRG00001019696Pabpn18781.410Cricetulus_griseus_chok1gshd
ENSMZEG00005011904pabpn15191.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSMZEG00005011904pabpn18293.802ENSCSEG00000008774pabpn19795.946Cynoglossus_semilaevis
ENSMZEG00005011904pabpn110091.837ENSCVAG00000003152pabpn110093.878Cyprinodon_variegatus
ENSMZEG00005011904pabpn110096.831ENSDARG00000045373pabpn110097.273Danio_rerio
ENSMZEG00005011904pabpn16682.474ENSDNOG00000023682PABPN18270.238Dasypus_novemcinctus
ENSMZEG00005011904pabpn16681.959ENSDORG00000028966-8269.444Dipodomys_ordii
ENSMZEG00005011904pabpn17758.333FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSMZEG00005011904pabpn17672.000ENSEBUG00000002322pabpn19672.000Eptatretus_burgeri
ENSMZEG00005011904pabpn16682.474ENSEASG00005011716PABPN18270.238Equus_asinus_asinus
ENSMZEG00005011904pabpn16782.564ENSECAG00000011652PABPN18570.356Equus_caballus
ENSMZEG00005011904pabpn16878.500ENSEEUG00000012973-6978.325Erinaceus_europaeus
ENSMZEG00005011904pabpn17594.470ENSELUG00000022654pabpn19594.667Esox_lucius
ENSMZEG00005011904pabpn16682.474ENSFCAG00000031922PABPN18270.238Felis_catus
ENSMZEG00005011904pabpn15481.410ENSFDAG00000018381BCL2L2-PABPN18781.410Fukomys_damarensis
ENSMZEG00005011904pabpn17796.364ENSFHEG00000007215pabpn19596.364Fundulus_heteroclitus
ENSMZEG00005011904pabpn110092.632ENSGMOG00000003922pabpn110095.088Gadus_morhua
ENSMZEG00005011904pabpn16183.708ENSGALG00000052930-5784.021Gallus_gallus
ENSMZEG00005011904pabpn17797.748ENSGAFG00000017099pabpn19597.748Gambusia_affinis
ENSMZEG00005011904pabpn110097.183ENSGACG00000002167pabpn110097.183Gasterosteus_aculeatus
ENSMZEG00005011904pabpn17775.566ENSGGOG00000022683-7976.018Gorilla_gorilla
ENSMZEG00005011904pabpn17265.766ENSGGOG00000025919-9068.613Gorilla_gorilla
ENSMZEG00005011904pabpn16969.192ENSGGOG00000039675-8765.217Gorilla_gorilla
ENSMZEG00005011904pabpn177100.000ENSHBUG00000019523pabpn195100.000Haplochromis_burtoni
ENSMZEG00005011904pabpn15365.359ENSHGLG00000009842-8765.359Heterocephalus_glaber_female
ENSMZEG00005011904pabpn16474.468ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSMZEG00005011904pabpn16681.959ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSMZEG00005011904pabpn17671.493ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSMZEG00005011904pabpn16474.468ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSMZEG00005011904pabpn17798.636ENSHCOG00000004655pabpn19598.636Hippocampus_comes
ENSMZEG00005011904pabpn17589.151ENSIPUG00000000180-9986.147Ictalurus_punctatus
ENSMZEG00005011904pabpn110083.904ENSIPUG00000008085PABPN19597.273Ictalurus_punctatus
ENSMZEG00005011904pabpn15482.051ENSSTOG00000029847BCL2L2-PABPN18782.051Ictidomys_tridecemlineatus
ENSMZEG00005011904pabpn15482.051ENSJJAG00000023507Gm205218782.051Jaculus_jaculus
ENSMZEG00005011904pabpn110097.544ENSKMAG00000018748pabpn110097.544Kryptolebias_marmoratus
ENSMZEG00005011904pabpn110098.592ENSLBEG00000027266pabpn110098.592Labrus_bergylta
ENSMZEG00005011904pabpn16287.640ENSLACG00000000646pabpn18584.021Latimeria_chalumnae
ENSMZEG00005011904pabpn16567.539ENSLOCG00000004694pabpn1l9366.337Lepisosteus_oculatus
ENSMZEG00005011904pabpn110091.930ENSLOCG00000000796pabpn110092.281Lepisosteus_oculatus
ENSMZEG00005011904pabpn17671.946ENSMFAG00000032183BCL2L2-PABPN18782.051Macaca_fascicularis
ENSMZEG00005011904pabpn17671.946ENSMMUG00000014747BCL2L2-PABPN19282.222Macaca_mulatta
ENSMZEG00005011904pabpn16667.876ENSMMUG00000048382-8558.755Macaca_mulatta
ENSMZEG00005011904pabpn16168.571ENSMNEG00000035750-9074.615Macaca_nemestrina
ENSMZEG00005011904pabpn17775.566ENSMNEG00000045065BCL2L2-PABPN17976.018Macaca_nemestrina
ENSMZEG00005011904pabpn15466.879ENSMLEG00000034623-9273.485Mandrillus_leucophaeus
ENSMZEG00005011904pabpn17671.946ENSMLEG00000043862BCL2L2-PABPN18782.051Mandrillus_leucophaeus
ENSMZEG00005011904pabpn110097.887ENSMAMG00000007979pabpn110097.887Mastacembelus_armatus
ENSMZEG00005011904pabpn16681.959ENSMAUG00000007383Gm205218370.000Mesocricetus_auratus
ENSMZEG00005011904pabpn17776.126ENSMICG00000010002BCL2L2-PABPN17976.786Microcebus_murinus
ENSMZEG00005011904pabpn17671.493ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSMZEG00005011904pabpn110099.648ENSMMOG00000005405pabpn110099.648Mola_mola
ENSMZEG00005011904pabpn16679.793ENSMODG00000004535-8269.841Monodelphis_domestica
ENSMZEG00005011904pabpn110098.239ENSMALG00000019612pabpn110098.239Monopterus_albus
ENSMZEG00005011904pabpn16680.928MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSMZEG00005011904pabpn17671.041MGP_CAROLIEiJ_G0019276Gm205216671.041Mus_caroli
ENSMZEG00005011904pabpn16681.443ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSMZEG00005011904pabpn17671.493ENSMUSG00000092232Gm205216671.493Mus_musculus
ENSMZEG00005011904pabpn16681.443MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSMZEG00005011904pabpn17671.493MGP_PahariEiJ_G0030294Gm205216671.493Mus_pahari
ENSMZEG00005011904pabpn16681.443MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSMZEG00005011904pabpn17671.493MGP_SPRETEiJ_G0020165Gm205216671.493Mus_spretus
ENSMZEG00005011904pabpn15482.051ENSMPUG00000006775-9282.051Mustela_putorius_furo
ENSMZEG00005011904pabpn16480.214ENSMLUG00000012452-7870.417Myotis_lucifugus
ENSMZEG00005011904pabpn16283.146ENSMLUG00000003800-9483.146Myotis_lucifugus
ENSMZEG00005011904pabpn16481.183ENSMLUG00000028677-8072.768Myotis_lucifugus
ENSMZEG00005011904pabpn17672.398ENSNGAG00000019529Gm205216672.398Nannospalax_galili
ENSMZEG00005011904pabpn110099.648ENSNBRG00000023955pabpn110099.648Neolamprologus_brichardi
ENSMZEG00005011904pabpn16682.474ENSNLEG00000015007-7082.234Nomascus_leucogenys
ENSMZEG00005011904pabpn16370.588ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSMZEG00005011904pabpn15674.233ENSODEG00000011555-8173.026Octodon_degus
ENSMZEG00005011904pabpn16673.822ENSODEG00000003739-8364.463Octodon_degus
ENSMZEG00005011904pabpn16681.959ENSODEG00000002083BCL2L2-PABPN16481.726Octodon_degus
ENSMZEG00005011904pabpn110099.648ENSONIG00000008112pabpn110099.648Oreochromis_niloticus
ENSMZEG00005011904pabpn16681.959ENSOCUG00000016174PABPN19069.721Oryctolagus_cuniculus
ENSMZEG00005011904pabpn110097.887ENSORLG00000027900pabpn110097.887Oryzias_latipes
ENSMZEG00005011904pabpn110095.205ENSORLG00020004681pabpn110095.205Oryzias_latipes_hni
ENSMZEG00005011904pabpn110095.205ENSORLG00015000018pabpn110095.205Oryzias_latipes_hsok
ENSMZEG00005011904pabpn110097.887ENSOMEG00000016618pabpn110097.887Oryzias_melastigma
ENSMZEG00005011904pabpn16682.474ENSOGAG00000008710PABPN18270.238Otolemur_garnettii
ENSMZEG00005011904pabpn17671.946ENSOARG00000019336BCL2L2-PABPN16171.946Ovis_aries
ENSMZEG00005011904pabpn15566.667ENSPPAG00000039421-8766.667Pan_paniscus
ENSMZEG00005011904pabpn17671.946ENSPPAG00000028984BCL2L2-PABPN19282.051Pan_paniscus
ENSMZEG00005011904pabpn16682.474ENSPPRG00000010567PABPN18270.238Panthera_pardus
ENSMZEG00005011904pabpn15482.051ENSPTIG00000001063BCL2L2-PABPN18782.051Panthera_tigris_altaica
ENSMZEG00005011904pabpn17775.566ENSPTRG00000006167BCL2L27976.018Pan_troglodytes
ENSMZEG00005011904pabpn17862.500ENSPTRG00000047273-8959.917Pan_troglodytes
ENSMZEG00005011904pabpn17775.566ENSPANG00000021100BCL2L2-PABPN17976.018Papio_anubis
ENSMZEG00005011904pabpn16469.355ENSPANG00000023326-9075.385Papio_anubis
ENSMZEG00005011904pabpn15670.625ENSPKIG00000008340pabpn1l8666.480Paramormyrops_kingsleyae
ENSMZEG00005011904pabpn110088.462ENSPKIG00000018052pabpn110091.259Paramormyrops_kingsleyae
ENSMZEG00005011904pabpn110095.775ENSPKIG00000008144-10095.775Paramormyrops_kingsleyae
ENSMZEG00005011904pabpn110092.254ENSPMGG00000022027pabpn110092.254Periophthalmus_magnuspinnatus
ENSMZEG00005011904pabpn16681.959ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSMZEG00005011904pabpn16475.806ENSPMAG00000006212pabpn19469.565Petromyzon_marinus
ENSMZEG00005011904pabpn16679.793ENSPCIG00000027751-8269.841Phascolarctos_cinereus
ENSMZEG00005011904pabpn110094.558ENSPFOG00000010351pabpn110094.558Poecilia_formosa
ENSMZEG00005011904pabpn110097.902ENSPLAG00000022696pabpn110097.902Poecilia_latipinna
ENSMZEG00005011904pabpn17796.396ENSPMEG00000020856pabpn19596.396Poecilia_mexicana
ENSMZEG00005011904pabpn110097.552ENSPREG00000011278pabpn110097.552Poecilia_reticulata
ENSMZEG00005011904pabpn16682.474ENSPPYG00000005663PABPN18970.238Pongo_abelii
ENSMZEG00005011904pabpn16469.271ENSPCAG00000005902PABPN18460.000Procavia_capensis
ENSMZEG00005011904pabpn17776.126ENSPCOG00000028047BCL2L2-PABPN17976.786Propithecus_coquereli
ENSMZEG00005011904pabpn16780.711ENSPVAG00000005270PABPN18269.323Pteropus_vampyrus
ENSMZEG00005011904pabpn177100.000ENSPNYG00000013182pabpn195100.000Pundamilia_nyererei
ENSMZEG00005011904pabpn15569.620ENSPNAG00000021666pabpn1l8469.591Pygocentrus_nattereri
ENSMZEG00005011904pabpn110096.831ENSPNAG00000023526pabpn19996.831Pygocentrus_nattereri
ENSMZEG00005011904pabpn16681.959ENSRNOG00000042195Pabpn18170.000Rattus_norvegicus
ENSMZEG00005011904pabpn16972.000ENSRBIG00000039547-7866.509Rhinopithecus_bieti
ENSMZEG00005011904pabpn17671.946ENSRBIG00000040762BCL2L2-PABPN16871.946Rhinopithecus_bieti
ENSMZEG00005011904pabpn16474.866ENSRBIG00000042811-8770.732Rhinopithecus_bieti
ENSMZEG00005011904pabpn17671.946ENSRROG00000045535BCL2L2-PABPN18782.051Rhinopithecus_roxellana
ENSMZEG00005011904pabpn16767.662ENSRROG00000036409-6864.384Rhinopithecus_roxellana
ENSMZEG00005011904pabpn17366.509ENSRROG00000040409-7866.509Rhinopithecus_roxellana
ENSMZEG00005011904pabpn17667.949ENSSBOG00000026930BCL2L2-PABPN19282.051Saimiri_boliviensis_boliviensis
ENSMZEG00005011904pabpn17762.389ENSSHAG00000007707-9462.389Sarcophilus_harrisii
ENSMZEG00005011904pabpn16281.356ENSSHAG00000014841-8183.708Sarcophilus_harrisii
ENSMZEG00005011904pabpn110089.123ENSSFOG00015012565pabpn110089.123Scleropages_formosus
ENSMZEG00005011904pabpn16464.481ENSSFOG00015015833pabpn1l8466.304Scleropages_formosus
ENSMZEG00005011904pabpn17796.364ENSSFOG00015014718pabpn19596.364Scleropages_formosus
ENSMZEG00005011904pabpn110098.944ENSSMAG00000020157pabpn110098.944Scophthalmus_maximus
ENSMZEG00005011904pabpn110098.592ENSSDUG00000020582pabpn110098.592Seriola_dumerili
ENSMZEG00005011904pabpn17799.091ENSSLDG00000007118pabpn19599.091Seriola_lalandi_dorsalis
ENSMZEG00005011904pabpn15085.616ENSSPUG00000018308-8783.974Sphenodon_punctatus
ENSMZEG00005011904pabpn110098.246ENSSPAG00000021658pabpn110098.246Stegastes_partitus
ENSMZEG00005011904pabpn16682.474ENSSSCG00000002023PABPN18270.238Sus_scrofa
ENSMZEG00005011904pabpn16865.816ENSSSCG00000034805-7561.905Sus_scrofa
ENSMZEG00005011904pabpn110097.183ENSTRUG00000023664pabpn110097.183Takifugu_rubripes
ENSMZEG00005011904pabpn17197.015ENSTNIG00000005369pabpn19397.015Tetraodon_nigroviridis
ENSMZEG00005011904pabpn16682.474ENSUAMG00000024460PABPN16482.234Ursus_americanus
ENSMZEG00005011904pabpn17671.946ENSUMAG00000014288BCL2L2-PABPN16671.946Ursus_maritimus
ENSMZEG00005011904pabpn17671.946ENSVVUG00000019912BCL2L2-PABPN17182.967Vulpes_vulpes
ENSMZEG00005011904pabpn16485.870ENSXETG00000014597pabpn16982.353Xenopus_tropicalis
ENSMZEG00005011904pabpn15784.049ENSXCOG00000005158pabpn19184.049Xiphophorus_couchianus
ENSMZEG00005011904pabpn110095.238ENSXMAG00000006196pabpn110095.238Xiphophorus_maculatus

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