EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005011999 (Gene tree)
Gene ID: 101484748
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: mitochondrial RNA pseudouridine synthase rpusd4
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 7310 bases
Position: chrLG5:17456734-17464043
Accession: 101484748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005015976	PseudoU_synth_2	PF00849.22	6.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005016487	-	6156	XM_004544739	ENSMZEP00005015976	387 (aa)	XP_004544796	UPI000D31F2E0

Gene Model

Click here to download ENSMZEG00005011999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005011999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005011999	rpusd4	83	51.534	ENSG00000165526	RPUSD4	86	51.057	Homo_sapiens
ENSMZEG00005011999	rpusd4	99	75.648	ENSAPOG00000011024	rpusd4	97	75.648	Acanthochromis_polyacanthus
ENSMZEG00005011999	rpusd4	75	46.032	ENSAMEG00000005953	-	95	46.032	Ailuropoda_melanoleuca
ENSMZEG00005011999	rpusd4	86	51.327	ENSAMEG00000000127	-	89	51.327	Ailuropoda_melanoleuca
ENSMZEG00005011999	rpusd4	84	87.385	ENSACIG00000003533	rpusd4	96	87.117	Amphilophus_citrinellus
ENSMZEG00005011999	rpusd4	99	76.883	ENSAOCG00000015409	rpusd4	96	76.883	Amphiprion_ocellaris
ENSMZEG00005011999	rpusd4	99	76.883	ENSAPEG00000018935	rpusd4	96	76.883	Amphiprion_percula
ENSMZEG00005011999	rpusd4	99	74.026	ENSATEG00000008059	rpusd4	96	74.026	Anabas_testudineus
ENSMZEG00005011999	rpusd4	72	51.418	ENSAPLG00000013250	RPUSD4	99	50.676	Anas_platyrhynchos
ENSMZEG00005011999	rpusd4	92	47.967	ENSACAG00000000189	RPUSD4	99	47.967	Anolis_carolinensis
ENSMZEG00005011999	rpusd4	86	48.673	ENSANAG00000024050	RPUSD4	90	48.673	Aotus_nancymaae
ENSMZEG00005011999	rpusd4	100	99.742	ENSACLG00000020996	rpusd4	100	99.742	Astatotilapia_calliptera
ENSMZEG00005011999	rpusd4	89	60.571	ENSAMXG00000031479	rpusd4	95	61.834	Astyanax_mexicanus
ENSMZEG00005011999	rpusd4	83	51.543	ENSBTAG00000020900	RPUSD4	85	51.543	Bos_taurus
ENSMZEG00005011999	rpusd4	84	49.547	ENSCJAG00000042850	RPUSD4	82	49.547	Callithrix_jacchus
ENSMZEG00005011999	rpusd4	84	53.191	ENSCAFG00000010488	RPUSD4	86	53.799	Canis_familiaris
ENSMZEG00005011999	rpusd4	84	53.191	ENSCAFG00020010621	RPUSD4	86	53.799	Canis_lupus_dingo
ENSMZEG00005011999	rpusd4	83	51.235	ENSCHIG00000009975	RPUSD4	84	51.235	Capra_hircus
ENSMZEG00005011999	rpusd4	86	51.775	ENSTSYG00000008456	RPUSD4	89	51.775	Carlito_syrichta
ENSMZEG00005011999	rpusd4	63	48.980	ENSCAPG00000006040	RPUSD4	93	48.980	Cavia_aperea
ENSMZEG00005011999	rpusd4	90	49.716	ENSCPOG00000014971	RPUSD4	93	49.716	Cavia_porcellus
ENSMZEG00005011999	rpusd4	84	49.547	ENSCCAG00000027838	RPUSD4	88	49.547	Cebus_capucinus
ENSMZEG00005011999	rpusd4	86	49.558	ENSCATG00000041570	RPUSD4	89	49.558	Cercocebus_atys
ENSMZEG00005011999	rpusd4	86	52.212	ENSCLAG00000016553	RPUSD4	88	52.212	Chinchilla_lanigera
ENSMZEG00005011999	rpusd4	84	50.453	ENSCSAG00000002274	RPUSD4	86	50.453	Chlorocebus_sabaeus
ENSMZEG00005011999	rpusd4	71	52.536	ENSCHOG00000010249	RPUSD4	96	52.536	Choloepus_hoffmanni
ENSMZEG00005011999	rpusd4	74	54.671	ENSCPBG00000011175	RPUSD4	99	54.671	Chrysemys_picta_bellii
ENSMZEG00005011999	rpusd4	68	41.455	ENSCSAVG00000000872	-	53	41.455	Ciona_savignyi
ENSMZEG00005011999	rpusd4	86	50.442	ENSCANG00000039684	RPUSD4	89	50.442	Colobus_angolensis_palliatus
ENSMZEG00005011999	rpusd4	87	51.009	ENSCGRG00001024141	Rpusd4	91	51.009	Cricetulus_griseus_chok1gshd
ENSMZEG00005011999	rpusd4	87	51.009	ENSCGRG00000014415	Rpusd4	91	51.009	Cricetulus_griseus_crigri
ENSMZEG00005011999	rpusd4	96	71.164	ENSCVAG00000000392	rpusd4	98	74.419	Cyprinodon_variegatus
ENSMZEG00005011999	rpusd4	96	71.429	ENSCVAG00000008761	rpusd4	97	71.429	Cyprinodon_variegatus
ENSMZEG00005011999	rpusd4	83	59.327	ENSDARG00000012674	rpusd4	90	59.877	Danio_rerio
ENSMZEG00005011999	rpusd4	87	51.026	ENSDNOG00000020026	RPUSD4	89	51.026	Dasypus_novemcinctus
ENSMZEG00005011999	rpusd4	84	50.760	ENSDORG00000016717	Rpusd4	86	50.760	Dipodomys_ordii
ENSMZEG00005011999	rpusd4	84	51.988	ENSETEG00000013953	RPUSD4	86	51.988	Echinops_telfairi
ENSMZEG00005011999	rpusd4	83	51.840	ENSEASG00005022982	RPUSD4	85	51.840	Equus_asinus_asinus
ENSMZEG00005011999	rpusd4	83	52.147	ENSECAG00000000557	RPUSD4	85	52.147	Equus_caballus
ENSMZEG00005011999	rpusd4	68	57.459	ENSEEUG00000014036	RPUSD4	70	57.459	Erinaceus_europaeus
ENSMZEG00005011999	rpusd4	95	60.526	ENSELUG00000008075	rpusd4	99	60.526	Esox_lucius
ENSMZEG00005011999	rpusd4	86	50.737	ENSFCAG00000029789	RPUSD4	89	51.327	Felis_catus
ENSMZEG00005011999	rpusd4	83	49.387	ENSFALG00000005171	RPUSD4	96	49.387	Ficedula_albicollis
ENSMZEG00005011999	rpusd4	92	49.167	ENSFDAG00000014307	RPUSD4	95	49.167	Fukomys_damarensis
ENSMZEG00005011999	rpusd4	99	72.868	ENSFHEG00000004329	rpusd4	99	72.868	Fundulus_heteroclitus
ENSMZEG00005011999	rpusd4	84	64.220	ENSGMOG00000017726	rpusd4	99	63.174	Gadus_morhua
ENSMZEG00005011999	rpusd4	73	52.982	ENSGALG00000024326	RPUSD4	94	48.802	Gallus_gallus
ENSMZEG00005011999	rpusd4	99	70.229	ENSGAFG00000021559	rpusd4	99	70.229	Gambusia_affinis
ENSMZEG00005011999	rpusd4	85	75.529	ENSGACG00000001657	rpusd4	97	78.339	Gasterosteus_aculeatus
ENSMZEG00005011999	rpusd4	89	51.862	ENSGAGG00000000132	RPUSD4	95	51.862	Gopherus_agassizii
ENSMZEG00005011999	rpusd4	83	51.534	ENSGGOG00000016494	RPUSD4	89	50.442	Gorilla_gorilla
ENSMZEG00005011999	rpusd4	100	98.708	ENSHBUG00000022838	rpusd4	100	98.708	Haplochromis_burtoni
ENSMZEG00005011999	rpusd4	89	50.575	ENSHGLG00000002285	RPUSD4	89	50.575	Heterocephalus_glaber_female
ENSMZEG00005011999	rpusd4	89	50.575	ENSHGLG00100006385	RPUSD4	89	50.575	Heterocephalus_glaber_male
ENSMZEG00005011999	rpusd4	99	67.358	ENSHCOG00000006612	rpusd4	98	67.358	Hippocampus_comes
ENSMZEG00005011999	rpusd4	89	57.020	ENSIPUG00000023879	rusd4	90	57.020	Ictalurus_punctatus
ENSMZEG00005011999	rpusd4	83	52.294	ENSSTOG00000025280	RPUSD4	89	52.294	Ictidomys_tridecemlineatus
ENSMZEG00005011999	rpusd4	94	49.051	ENSJJAG00000018673	Rpusd4	98	49.051	Jaculus_jaculus
ENSMZEG00005011999	rpusd4	99	70.769	ENSKMAG00000021805	rpusd4	99	70.769	Kryptolebias_marmoratus
ENSMZEG00005011999	rpusd4	93	70.312	ENSLBEG00000020394	rpusd4	93	78.012	Labrus_bergylta
ENSMZEG00005011999	rpusd4	83	51.385	ENSLACG00000011028	RPUSD4	82	51.385	Latimeria_chalumnae
ENSMZEG00005011999	rpusd4	89	45.272	ENSLOCG00000003124	rpusd4	92	45.272	Lepisosteus_oculatus
ENSMZEG00005011999	rpusd4	86	51.775	ENSLAFG00000005211	RPUSD4	100	45.424	Loxodonta_africana
ENSMZEG00005011999	rpusd4	86	49.853	ENSMFAG00000039513	RPUSD4	89	49.853	Macaca_fascicularis
ENSMZEG00005011999	rpusd4	86	49.558	ENSMMUG00000007933	RPUSD4	89	49.558	Macaca_mulatta
ENSMZEG00005011999	rpusd4	86	50.147	ENSMNEG00000027414	RPUSD4	89	50.147	Macaca_nemestrina
ENSMZEG00005011999	rpusd4	83	50.610	ENSMLEG00000042461	RPUSD4	86	50.610	Mandrillus_leucophaeus
ENSMZEG00005011999	rpusd4	99	70.769	ENSMAMG00000023839	rpusd4	99	70.769	Mastacembelus_armatus
ENSMZEG00005011999	rpusd4	72	52.632	ENSMGAG00000000840	RPUSD4	99	49.240	Meleagris_gallopavo
ENSMZEG00005011999	rpusd4	87	50.867	ENSMAUG00000010280	Rpusd4	90	50.867	Mesocricetus_auratus
ENSMZEG00005011999	rpusd4	86	50.737	ENSMICG00000015979	RPUSD4	89	54.305	Microcebus_murinus
ENSMZEG00005011999	rpusd4	87	48.991	ENSMOCG00000000661	Rpusd4	91	48.991	Microtus_ochrogaster
ENSMZEG00005011999	rpusd4	80	77.492	ENSMMOG00000021731	rpusd4	93	77.492	Mola_mola
ENSMZEG00005011999	rpusd4	79	55.161	ENSMODG00000004521	RPUSD4	78	55.161	Monodelphis_domestica
ENSMZEG00005011999	rpusd4	79	82.353	ENSMALG00000005839	rpusd4	95	81.150	Monopterus_albus
ENSMZEG00005011999	rpusd4	87	51.009	MGP_CAROLIEiJ_G0031954	Rpusd4	91	51.009	Mus_caroli
ENSMZEG00005011999	rpusd4	87	51.585	ENSMUSG00000032044	Rpusd4	91	51.585	Mus_musculus
ENSMZEG00005011999	rpusd4	87	51.009	MGP_PahariEiJ_G0014819	Rpusd4	91	51.009	Mus_pahari
ENSMZEG00005011999	rpusd4	87	51.297	MGP_SPRETEiJ_G0033078	Rpusd4	91	51.297	Mus_spretus
ENSMZEG00005011999	rpusd4	84	51.368	ENSMPUG00000006608	RPUSD4	86	51.368	Mustela_putorius_furo
ENSMZEG00005011999	rpusd4	66	52.326	ENSMLUG00000029348	-	99	52.326	Myotis_lucifugus
ENSMZEG00005011999	rpusd4	82	52.795	ENSMLUG00000017328	-	84	52.795	Myotis_lucifugus
ENSMZEG00005011999	rpusd4	84	53.776	ENSNGAG00000020847	Rpusd4	86	53.776	Nannospalax_galili
ENSMZEG00005011999	rpusd4	84	98.154	ENSNBRG00000005207	rpusd4	95	98.154	Neolamprologus_brichardi
ENSMZEG00005011999	rpusd4	89	49.014	ENSNLEG00000007465	RPUSD4	93	49.014	Nomascus_leucogenys
ENSMZEG00005011999	rpusd4	83	52.761	ENSMEUG00000004370	RPUSD4	87	52.761	Notamacropus_eugenii
ENSMZEG00005011999	rpusd4	90	48.870	ENSODEG00000004577	RPUSD4	93	48.870	Octodon_degus
ENSMZEG00005011999	rpusd4	100	96.641	ENSONIG00000018879	rpusd4	100	96.641	Oreochromis_niloticus
ENSMZEG00005011999	rpusd4	75	49.324	ENSOANG00000007247	RPUSD4	95	48.837	Ornithorhynchus_anatinus
ENSMZEG00005011999	rpusd4	84	52.888	ENSOCUG00000017039	RPUSD4	86	52.888	Oryctolagus_cuniculus
ENSMZEG00005011999	rpusd4	90	69.253	ENSORLG00000002750	rpusd4	94	70.175	Oryzias_latipes
ENSMZEG00005011999	rpusd4	92	67.416	ENSORLG00020002044	rpusd4	89	67.416	Oryzias_latipes_hni
ENSMZEG00005011999	rpusd4	91	67.232	ENSORLG00015020034	rpusd4	89	67.232	Oryzias_latipes_hsok
ENSMZEG00005011999	rpusd4	91	72.521	ENSOMEG00000004861	rpusd4	88	72.521	Oryzias_melastigma
ENSMZEG00005011999	rpusd4	83	53.374	ENSOGAG00000008922	RPUSD4	88	52.212	Otolemur_garnettii
ENSMZEG00005011999	rpusd4	83	51.235	ENSOARG00000012238	RPUSD4	84	51.235	Ovis_aries
ENSMZEG00005011999	rpusd4	83	51.534	ENSPPAG00000042883	RPUSD4	82	50.442	Pan_paniscus
ENSMZEG00005011999	rpusd4	86	51.327	ENSPPRG00000003081	RPUSD4	89	51.327	Panthera_pardus
ENSMZEG00005011999	rpusd4	86	51.327	ENSPTIG00000012059	RPUSD4	87	53.420	Panthera_tigris_altaica
ENSMZEG00005011999	rpusd4	83	51.534	ENSPTRG00000004454	RPUSD4	89	50.442	Pan_troglodytes
ENSMZEG00005011999	rpusd4	86	49.558	ENSPANG00000015040	RPUSD4	89	49.558	Papio_anubis
ENSMZEG00005011999	rpusd4	86	58.258	ENSPKIG00000023986	rpusd4	85	58.258	Paramormyrops_kingsleyae
ENSMZEG00005011999	rpusd4	76	54.545	ENSPSIG00000014268	RPUSD4	93	54.545	Pelodiscus_sinensis
ENSMZEG00005011999	rpusd4	91	66.852	ENSPMGG00000002806	rpusd4	95	67.552	Periophthalmus_magnuspinnatus
ENSMZEG00005011999	rpusd4	84	45.593	ENSPEMG00000000278	Rpusd4	85	45.593	Peromyscus_maniculatus_bairdii
ENSMZEG00005011999	rpusd4	79	40.533	ENSPMAG00000008183	rpusd4	98	40.533	Petromyzon_marinus
ENSMZEG00005011999	rpusd4	83	52.761	ENSPCIG00000010212	RPUSD4	88	52.761	Phascolarctos_cinereus
ENSMZEG00005011999	rpusd4	95	71.429	ENSPFOG00000019030	rpusd4	99	71.429	Poecilia_formosa
ENSMZEG00005011999	rpusd4	99	70.408	ENSPLAG00000016848	rpusd4	99	70.408	Poecilia_latipinna
ENSMZEG00005011999	rpusd4	99	68.622	ENSPMEG00000017534	rpusd4	99	68.622	Poecilia_mexicana
ENSMZEG00005011999	rpusd4	97	70.419	ENSPREG00000005689	rpusd4	98	70.419	Poecilia_reticulata
ENSMZEG00005011999	rpusd4	86	49.853	ENSPPYG00000004043	RPUSD4	89	49.853	Pongo_abelii
ENSMZEG00005011999	rpusd4	64	58.011	ENSPCAG00000000753	RPUSD4	67	58.011	Procavia_capensis
ENSMZEG00005011999	rpusd4	86	49.408	ENSPCOG00000020694	RPUSD4	89	49.408	Propithecus_coquereli
ENSMZEG00005011999	rpusd4	84	51.976	ENSPVAG00000000988	RPUSD4	87	51.976	Pteropus_vampyrus
ENSMZEG00005011999	rpusd4	100	98.191	ENSPNYG00000009652	rpusd4	100	98.191	Pundamilia_nyererei
ENSMZEG00005011999	rpusd4	86	61.677	ENSPNAG00000012264	rpusd4	88	61.677	Pygocentrus_nattereri
ENSMZEG00005011999	rpusd4	84	52.568	ENSRNOG00000011567	Rpusd4	86	52.568	Rattus_norvegicus
ENSMZEG00005011999	rpusd4	85	50.000	ENSRBIG00000034842	RPUSD4	89	49.558	Rhinopithecus_bieti
ENSMZEG00005011999	rpusd4	85	50.000	ENSRROG00000039753	RPUSD4	89	49.558	Rhinopithecus_roxellana
ENSMZEG00005011999	rpusd4	84	49.245	ENSSBOG00000030413	RPUSD4	88	49.245	Saimiri_boliviensis_boliviensis
ENSMZEG00005011999	rpusd4	78	53.289	ENSSHAG00000008304	RPUSD4	99	53.289	Sarcophilus_harrisii
ENSMZEG00005011999	rpusd4	83	57.879	ENSSFOG00015006203	rpusd4	89	58.485	Scleropages_formosus
ENSMZEG00005011999	rpusd4	99	71.429	ENSSMAG00000020978	rpusd4	99	71.618	Scophthalmus_maximus
ENSMZEG00005011999	rpusd4	99	74.870	ENSSDUG00000013399	rpusd4	100	74.870	Seriola_dumerili
ENSMZEG00005011999	rpusd4	99	75.389	ENSSLDG00000023507	rpusd4	100	75.389	Seriola_lalandi_dorsalis
ENSMZEG00005011999	rpusd4	83	52.121	ENSSPUG00000001401	RPUSD4	90	52.424	Sphenodon_punctatus
ENSMZEG00005011999	rpusd4	99	73.643	ENSSPAG00000012163	rpusd4	99	73.643	Stegastes_partitus
ENSMZEG00005011999	rpusd4	84	51.829	ENSSSCG00000015233	RPUSD4	86	51.829	Sus_scrofa
ENSMZEG00005011999	rpusd4	77	52.000	ENSTGUG00000000773	RPUSD4	99	52.000	Taeniopygia_guttata
ENSMZEG00005011999	rpusd4	99	68.992	ENSTRUG00000012283	rpusd4	99	68.992	Takifugu_rubripes
ENSMZEG00005011999	rpusd4	99	66.150	ENSTNIG00000014676	rpusd4	99	66.150	Tetraodon_nigroviridis
ENSMZEG00005011999	rpusd4	84	51.524	ENSTTRG00000001555	RPUSD4	86	51.524	Tursiops_truncatus
ENSMZEG00005011999	rpusd4	86	51.917	ENSUMAG00000002219	RPUSD4	89	51.917	Ursus_maritimus
ENSMZEG00005011999	rpusd4	58	50.000	ENSVPAG00000001066	RPUSD4	84	50.000	Vicugna_pacos
ENSMZEG00005011999	rpusd4	84	53.191	ENSVVUG00000020101	RPUSD4	86	53.799	Vulpes_vulpes
ENSMZEG00005011999	rpusd4	99	69.720	ENSXCOG00000004676	rpusd4	99	69.720	Xiphophorus_couchianus
ENSMZEG00005011999	rpusd4	99	69.720	ENSXMAG00000023351	rpusd4	99	69.720	Xiphophorus_maculatus