EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005012082 (Gene tree)
Gene ID: 101481098
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 17608 bases
Position: chrLG1:16080129-16097736
Accession: 101481098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005016113	Suf	PF05843.14	1.3e-84	1	1
ENSMZEP00005016132	Suf	PF05843.14	3e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005016628	-	5633	XM_004539423	ENSMZEP00005016113	716 (aa)	XP_004539480	UPI00022B1754
ENSMZET00005016647	-	2109	-	ENSMZEP00005016132	702 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005012082's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005012082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005012082	cstf3	100	91.086	ENSG00000176102	CSTF3	98	91.773	Homo_sapiens
ENSMZEG00005012082	cstf3	100	98.045	ENSAPOG00000014054	cstf3	100	98.045	Acanthochromis_polyacanthus
ENSMZEG00005012082	cstf3	99	91.667	ENSAMEG00000007187	CSTF3	98	91.631	Ailuropoda_melanoleuca
ENSMZEG00005012082	cstf3	89	94.382	ENSACIG00000005539	cstf3	100	94.382	Amphilophus_citrinellus
ENSMZEG00005012082	cstf3	100	98.045	ENSAOCG00000010930	cstf3	100	98.045	Amphiprion_ocellaris
ENSMZEG00005012082	cstf3	100	98.045	ENSAPEG00000007903	cstf3	100	98.045	Amphiprion_percula
ENSMZEG00005012082	cstf3	100	98.184	ENSATEG00000000190	cstf3	100	98.184	Anabas_testudineus
ENSMZEG00005012082	cstf3	99	91.808	ENSAPLG00000007217	CSTF3	99	91.773	Anas_platyrhynchos
ENSMZEG00005012082	cstf3	100	91.365	ENSACAG00000002823	CSTF3	98	92.057	Anolis_carolinensis
ENSMZEG00005012082	cstf3	100	91.086	ENSANAG00000020699	CSTF3	95	96.154	Aotus_nancymaae
ENSMZEG00005012082	cstf3	100	100.000	ENSACLG00000007820	cstf3	100	100.000	Astatotilapia_calliptera
ENSMZEG00005012082	cstf3	100	92.201	ENSAMXG00000014198	cstf3	99	93.362	Astyanax_mexicanus
ENSMZEG00005012082	cstf3	100	91.086	ENSBTAG00000008617	CSTF3	100	91.543	Bos_taurus
ENSMZEG00005012082	cstf3	98	46.900	WBGene00006307	suf-1	99	47.305	Caenorhabditis_elegans
ENSMZEG00005012082	cstf3	100	91.086	ENSCJAG00000005533	CSTF3	100	91.040	Callithrix_jacchus
ENSMZEG00005012082	cstf3	100	91.086	ENSCAFG00000007264	CSTF3	98	91.773	Canis_familiaris
ENSMZEG00005012082	cstf3	99	91.808	ENSCAFG00020002715	CSTF3	99	91.155	Canis_lupus_dingo
ENSMZEG00005012082	cstf3	99	91.236	ENSCHIG00000016418	CSTF3	100	91.236	Capra_hircus
ENSMZEG00005012082	cstf3	99	92.090	ENSTSYG00000000451	CSTF3	99	97.105	Carlito_syrichta
ENSMZEG00005012082	cstf3	84	90.602	ENSCAPG00000010958	CSTF3	98	90.602	Cavia_aperea
ENSMZEG00005012082	cstf3	100	91.226	ENSCPOG00000005545	CSTF3	99	91.773	Cavia_porcellus
ENSMZEG00005012082	cstf3	100	91.086	ENSCCAG00000024790	CSTF3	96	97.105	Cebus_capucinus
ENSMZEG00005012082	cstf3	100	91.086	ENSCATG00000007080	CSTF3	100	91.040	Cercocebus_atys
ENSMZEG00005012082	cstf3	100	91.086	ENSCLAG00000016179	CSTF3	98	91.773	Chinchilla_lanigera
ENSMZEG00005012082	cstf3	78	97.744	ENSCHOG00000002497	CSTF3	79	97.744	Choloepus_hoffmanni
ENSMZEG00005012082	cstf3	100	91.365	ENSCPBG00000006753	CSTF3	98	92.057	Chrysemys_picta_bellii
ENSMZEG00005012082	cstf3	99	62.275	ENSCING00000006401	-	98	62.657	Ciona_intestinalis
ENSMZEG00005012082	cstf3	99	60.615	ENSCSAVG00000004851	-	100	60.615	Ciona_savignyi
ENSMZEG00005012082	cstf3	100	91.086	ENSCANG00000035468	CSTF3	100	91.040	Colobus_angolensis_palliatus
ENSMZEG00005012082	cstf3	100	91.086	ENSCGRG00001014773	Cstf3	98	91.489	Cricetulus_griseus_chok1gshd
ENSMZEG00005012082	cstf3	100	91.086	ENSCGRG00000004142	Cstf3	98	91.489	Cricetulus_griseus_crigri
ENSMZEG00005012082	cstf3	100	96.788	ENSCSEG00000014283	cstf3	100	96.788	Cynoglossus_semilaevis
ENSMZEG00005012082	cstf3	100	96.229	ENSCVAG00000019739	cstf3	100	96.229	Cyprinodon_variegatus
ENSMZEG00005012082	cstf3	100	94.561	ENSDARG00000018904	cstf3	98	95.170	Danio_rerio
ENSMZEG00005012082	cstf3	99	91.949	ENSDNOG00000007366	CSTF3	98	91.915	Dasypus_novemcinctus
ENSMZEG00005012082	cstf3	99	84.344	ENSDORG00000005898	Cstf3	99	84.344	Dipodomys_ordii
ENSMZEG00005012082	cstf3	99	55.995	FBgn0003559	su(f)	98	55.995	Drosophila_melanogaster
ENSMZEG00005012082	cstf3	85	90.301	ENSETEG00000017097	CSTF3	90	85.826	Echinops_telfairi
ENSMZEG00005012082	cstf3	85	75.671	ENSEBUG00000015459	cstf3	96	75.671	Eptatretus_burgeri
ENSMZEG00005012082	cstf3	99	90.395	ENSEASG00005019884	CSTF3	96	97.105	Equus_asinus_asinus
ENSMZEG00005012082	cstf3	99	90.395	ENSECAG00000023338	CSTF3	96	97.105	Equus_caballus
ENSMZEG00005012082	cstf3	100	86.212	ENSEEUG00000015167	CSTF3	98	86.667	Erinaceus_europaeus
ENSMZEG00005012082	cstf3	100	94.421	ENSELUG00000023393	cstf3	98	94.744	Esox_lucius
ENSMZEG00005012082	cstf3	100	91.226	ENSFCAG00000030711	CSTF3	98	91.915	Felis_catus
ENSMZEG00005012082	cstf3	92	93.967	ENSFALG00000010764	CSTF3	100	90.783	Ficedula_albicollis
ENSMZEG00005012082	cstf3	100	91.226	ENSFDAG00000012082	CSTF3	98	91.915	Fukomys_damarensis
ENSMZEG00005012082	cstf3	100	96.369	ENSFHEG00000020623	cstf3	100	96.369	Fundulus_heteroclitus
ENSMZEG00005012082	cstf3	100	93.454	ENSGMOG00000012275	cstf3	98	94.326	Gadus_morhua
ENSMZEG00005012082	cstf3	100	90.808	ENSGALG00000011685	CSTF3	98	91.631	Gallus_gallus
ENSMZEG00005012082	cstf3	100	96.648	ENSGAFG00000002181	cstf3	100	96.648	Gambusia_affinis
ENSMZEG00005012082	cstf3	100	96.508	ENSGACG00000015997	cstf3	100	96.508	Gasterosteus_aculeatus
ENSMZEG00005012082	cstf3	100	91.365	ENSGAGG00000006200	CSTF3	100	91.365	Gopherus_agassizii
ENSMZEG00005012082	cstf3	99	86.876	ENSGGOG00000026591	CSTF3	96	93.665	Gorilla_gorilla
ENSMZEG00005012082	cstf3	100	99.860	ENSHBUG00000016656	cstf3	100	99.860	Haplochromis_burtoni
ENSMZEG00005012082	cstf3	100	91.086	ENSHGLG00000017834	CSTF3	98	91.773	Heterocephalus_glaber_female
ENSMZEG00005012082	cstf3	100	91.086	ENSHGLG00100018042	CSTF3	99	91.773	Heterocephalus_glaber_male
ENSMZEG00005012082	cstf3	99	94.143	ENSHCOG00000015218	cstf3	99	94.168	Hippocampus_comes
ENSMZEG00005012082	cstf3	100	93.166	ENSIPUG00000013170	CSTF3	99	94.034	Ictalurus_punctatus
ENSMZEG00005012082	cstf3	100	91.086	ENSSTOG00000013306	CSTF3	98	91.773	Ictidomys_tridecemlineatus
ENSMZEG00005012082	cstf3	99	81.513	ENSJJAG00000018430	Cstf3	99	81.513	Jaculus_jaculus
ENSMZEG00005012082	cstf3	100	95.670	ENSKMAG00000010916	cstf3	98	96.444	Kryptolebias_marmoratus
ENSMZEG00005012082	cstf3	100	96.508	ENSLBEG00000002306	cstf3	100	96.508	Labrus_bergylta
ENSMZEG00005012082	cstf3	100	90.237	ENSLACG00000017296	CSTF3	98	90.909	Latimeria_chalumnae
ENSMZEG00005012082	cstf3	100	93.872	ENSLOCG00000004415	cstf3	98	94.610	Lepisosteus_oculatus
ENSMZEG00005012082	cstf3	100	91.226	ENSLAFG00000008712	CSTF3	98	91.773	Loxodonta_africana
ENSMZEG00005012082	cstf3	100	91.086	ENSMFAG00000029516	CSTF3	100	91.040	Macaca_fascicularis
ENSMZEG00005012082	cstf3	100	91.086	ENSMMUG00000002542	CSTF3	98	91.773	Macaca_mulatta
ENSMZEG00005012082	cstf3	100	91.086	ENSMNEG00000021807	CSTF3	100	91.040	Macaca_nemestrina
ENSMZEG00005012082	cstf3	100	91.086	ENSMLEG00000039594	CSTF3	97	94.878	Mandrillus_leucophaeus
ENSMZEG00005012082	cstf3	100	97.905	ENSMAMG00000020423	cstf3	100	97.905	Mastacembelus_armatus
ENSMZEG00005012082	cstf3	100	90.669	ENSMGAG00000001383	CSTF3	99	91.243	Meleagris_gallopavo
ENSMZEG00005012082	cstf3	100	90.947	ENSMAUG00000002487	Cstf3	98	91.348	Mesocricetus_auratus
ENSMZEG00005012082	cstf3	100	91.086	ENSMICG00000004784	CSTF3	100	91.040	Microcebus_murinus
ENSMZEG00005012082	cstf3	100	91.086	ENSMOCG00000017583	Cstf3	98	91.489	Microtus_ochrogaster
ENSMZEG00005012082	cstf3	99	97.599	ENSMMOG00000016026	cstf3	95	97.599	Mola_mola
ENSMZEG00005012082	cstf3	100	91.365	ENSMODG00000009745	-	98	91.915	Monodelphis_domestica
ENSMZEG00005012082	cstf3	99	80.899	ENSMODG00000025205	-	99	80.481	Monodelphis_domestica
ENSMZEG00005012082	cstf3	100	97.905	ENSMALG00000012050	cstf3	100	97.905	Monopterus_albus
ENSMZEG00005012082	cstf3	100	91.086	MGP_CAROLIEiJ_G0024026	Cstf3	98	91.489	Mus_caroli
ENSMZEG00005012082	cstf3	100	91.086	ENSMUSG00000027176	Cstf3	98	91.489	Mus_musculus
ENSMZEG00005012082	cstf3	100	91.086	MGP_PahariEiJ_G0025464	Cstf3	98	91.489	Mus_pahari
ENSMZEG00005012082	cstf3	100	91.086	MGP_SPRETEiJ_G0024939	Cstf3	98	91.489	Mus_spretus
ENSMZEG00005012082	cstf3	100	90.947	ENSMPUG00000011457	CSTF3	98	91.631	Mustela_putorius_furo
ENSMZEG00005012082	cstf3	100	88.719	ENSMLUG00000026022	-	98	89.220	Myotis_lucifugus
ENSMZEG00005012082	cstf3	99	91.808	ENSMLUG00000003073	-	98	91.773	Myotis_lucifugus
ENSMZEG00005012082	cstf3	100	91.226	ENSNGAG00000010677	Cstf3	99	91.631	Nannospalax_galili
ENSMZEG00005012082	cstf3	89	100.000	ENSNBRG00000007345	cstf3	100	100.000	Neolamprologus_brichardi
ENSMZEG00005012082	cstf3	100	91.086	ENSNLEG00000017901	CSTF3	97	96.154	Nomascus_leucogenys
ENSMZEG00005012082	cstf3	73	90.822	ENSMEUG00000005640	-	100	90.822	Notamacropus_eugenii
ENSMZEG00005012082	cstf3	67	96.970	ENSOPRG00000000199	-	66	96.970	Ochotona_princeps
ENSMZEG00005012082	cstf3	100	91.365	ENSODEG00000016737	-	99	91.298	Octodon_degus
ENSMZEG00005012082	cstf3	88	80.806	ENSODEG00000006311	-	97	79.245	Octodon_degus
ENSMZEG00005012082	cstf3	100	100.000	ENSONIG00000005563	cstf3	100	100.000	Oreochromis_niloticus
ENSMZEG00005012082	cstf3	90	90.679	ENSOANG00000015140	CSTF3	100	90.154	Ornithorhynchus_anatinus
ENSMZEG00005012082	cstf3	100	91.086	ENSOCUG00000015417	CSTF3	98	91.631	Oryctolagus_cuniculus
ENSMZEG00005012082	cstf3	100	96.089	ENSORLG00000009762	cstf3	100	96.089	Oryzias_latipes
ENSMZEG00005012082	cstf3	100	96.089	ENSORLG00020005540	cstf3	100	96.089	Oryzias_latipes_hni
ENSMZEG00005012082	cstf3	100	95.950	ENSORLG00015003551	cstf3	100	95.950	Oryzias_latipes_hsok
ENSMZEG00005012082	cstf3	100	96.369	ENSOMEG00000003848	cstf3	100	96.369	Oryzias_melastigma
ENSMZEG00005012082	cstf3	100	90.707	ENSOGAG00000010229	CSTF3	98	91.243	Otolemur_garnettii
ENSMZEG00005012082	cstf3	90	91.135	ENSOARG00000017271	CSTF3	99	91.135	Ovis_aries
ENSMZEG00005012082	cstf3	99	89.301	ENSPPAG00000027358	CSTF3	99	89.301	Pan_paniscus
ENSMZEG00005012082	cstf3	100	91.226	ENSPPRG00000016852	CSTF3	98	91.915	Panthera_pardus
ENSMZEG00005012082	cstf3	100	91.226	ENSPTIG00000008716	CSTF3	98	91.915	Panthera_tigris_altaica
ENSMZEG00005012082	cstf3	100	91.086	ENSPTRG00000003485	CSTF3	98	91.773	Pan_troglodytes
ENSMZEG00005012082	cstf3	100	91.086	ENSPANG00000013722	CSTF3	97	94.878	Papio_anubis
ENSMZEG00005012082	cstf3	100	93.724	ENSPKIG00000023648	cstf3	98	94.318	Paramormyrops_kingsleyae
ENSMZEG00005012082	cstf3	100	91.365	ENSPSIG00000009173	CSTF3	98	92.057	Pelodiscus_sinensis
ENSMZEG00005012082	cstf3	77	97.810	ENSPMGG00000000164	cstf3	99	97.810	Periophthalmus_magnuspinnatus
ENSMZEG00005012082	cstf3	100	91.086	ENSPEMG00000011481	Cstf3	98	91.489	Peromyscus_maniculatus_bairdii
ENSMZEG00005012082	cstf3	99	79.296	ENSPMAG00000007282	cstf3	99	78.622	Petromyzon_marinus
ENSMZEG00005012082	cstf3	100	89.013	ENSPCIG00000026406	-	100	91.520	Phascolarctos_cinereus
ENSMZEG00005012082	cstf3	100	76.356	ENSPCIG00000030419	-	89	76.728	Phascolarctos_cinereus
ENSMZEG00005012082	cstf3	100	96.927	ENSPFOG00000017239	cstf3	100	96.927	Poecilia_formosa
ENSMZEG00005012082	cstf3	100	97.067	ENSPLAG00000009456	cstf3	100	97.067	Poecilia_latipinna
ENSMZEG00005012082	cstf3	100	96.927	ENSPMEG00000010320	cstf3	100	96.927	Poecilia_mexicana
ENSMZEG00005012082	cstf3	100	96.927	ENSPREG00000013549	cstf3	100	96.927	Poecilia_reticulata
ENSMZEG00005012082	cstf3	100	91.086	ENSPPYG00000003375	CSTF3	98	91.773	Pongo_abelii
ENSMZEG00005012082	cstf3	71	96.167	ENSPCAG00000008025	-	70	96.167	Procavia_capensis
ENSMZEG00005012082	cstf3	99	87.589	ENSPCOG00000014417	CSTF3	99	87.589	Propithecus_coquereli
ENSMZEG00005012082	cstf3	100	86.072	ENSPVAG00000002350	CSTF3	99	86.723	Pteropus_vampyrus
ENSMZEG00005012082	cstf3	100	99.860	ENSPNYG00000018259	cstf3	100	99.860	Pundamilia_nyererei
ENSMZEG00005012082	cstf3	100	94.700	ENSPNAG00000020182	cstf3	98	95.455	Pygocentrus_nattereri
ENSMZEG00005012082	cstf3	89	90.400	ENSRNOG00000012089	Cstf3	100	90.400	Rattus_norvegicus
ENSMZEG00005012082	cstf3	99	90.395	ENSRBIG00000044258	CSTF3	100	91.040	Rhinopithecus_bieti
ENSMZEG00005012082	cstf3	100	91.086	ENSRROG00000043450	CSTF3	100	91.040	Rhinopithecus_roxellana
ENSMZEG00005012082	cstf3	100	91.086	ENSSBOG00000024764	CSTF3	98	97.105	Saimiri_boliviensis_boliviensis
ENSMZEG00005012082	cstf3	100	81.198	ENSSHAG00000003135	-	98	82.128	Sarcophilus_harrisii
ENSMZEG00005012082	cstf3	99	91.949	ENSSHAG00000018128	-	98	91.915	Sarcophilus_harrisii
ENSMZEG00005012082	cstf3	100	94.003	ENSSFOG00015022133	cstf3	98	94.602	Scleropages_formosus
ENSMZEG00005012082	cstf3	100	97.067	ENSSMAG00000002197	cstf3	100	97.067	Scophthalmus_maximus
ENSMZEG00005012082	cstf3	100	98.464	ENSSDUG00000020426	cstf3	100	98.464	Seriola_dumerili
ENSMZEG00005012082	cstf3	100	98.184	ENSSLDG00000025649	cstf3	100	98.184	Seriola_lalandi_dorsalis
ENSMZEG00005012082	cstf3	100	90.947	ENSSARG00000000391	CSTF3	98	91.631	Sorex_araneus
ENSMZEG00005012082	cstf3	96	91.462	ENSSPUG00000010546	CSTF3	100	91.462	Sphenodon_punctatus
ENSMZEG00005012082	cstf3	100	97.905	ENSSPAG00000004958	cstf3	100	97.905	Stegastes_partitus
ENSMZEG00005012082	cstf3	99	90.795	ENSSSCG00000040954	CSTF3	98	91.631	Sus_scrofa
ENSMZEG00005012082	cstf3	99	91.808	ENSTGUG00000005010	CSTF3	99	91.915	Taeniopygia_guttata
ENSMZEG00005012082	cstf3	100	95.391	ENSTRUG00000004959	cstf3	98	95.875	Takifugu_rubripes
ENSMZEG00005012082	cstf3	99	96.610	ENSTNIG00000013811	cstf3	99	96.610	Tetraodon_nigroviridis
ENSMZEG00005012082	cstf3	90	88.273	ENSTBEG00000001544	CSTF3	90	88.474	Tupaia_belangeri
ENSMZEG00005012082	cstf3	100	88.301	ENSTTRG00000016366	CSTF3	98	88.936	Tursiops_truncatus
ENSMZEG00005012082	cstf3	99	91.525	ENSUMAG00000018971	CSTF3	100	90.720	Ursus_maritimus
ENSMZEG00005012082	cstf3	100	90.947	ENSVPAG00000007800	CSTF3	98	91.631	Vicugna_pacos
ENSMZEG00005012082	cstf3	99	91.808	ENSVVUG00000014938	CSTF3	100	91.040	Vulpes_vulpes
ENSMZEG00005012082	cstf3	66	42.324	ENSXETG00000017946	-	99	41.962	Xenopus_tropicalis
ENSMZEG00005012082	cstf3	88	76.153	ENSXETG00000021399	cstf3	100	77.023	Xenopus_tropicalis
ENSMZEG00005012082	cstf3	89	96.469	ENSXCOG00000011741	cstf3	100	96.469	Xiphophorus_couchianus
ENSMZEG00005012082	cstf3	100	96.788	ENSXMAG00000009545	cstf3	100	96.788	Xiphophorus_maculatus