EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005012096 (Gene tree)
Gene ID: 101469959
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 3407 bases
Position: chrLG6:35360094-35363500
Accession: 101469959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005016108	RRM_1	PF00076.22	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005016623	-	2078	XM_014411963	ENSMZEP00005016108	261 (aa)	XP_014267449	UPI000D31995C

Gene Model

Click here to download ENSMZEG00005012096's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG
mze03015	mRNA surveillance pathway	KEGG
mze03040	Spliceosome	KEGG
mze05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005012096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005012096	-	100	68.061	ENSAPOG00000000183	-	100	69.962	Acanthochromis_polyacanthus
ENSMZEG00005012096	-	100	76.384	ENSACIG00000020351	-	100	77.122	Amphilophus_citrinellus
ENSMZEG00005012096	-	98	53.261	ENSACIG00000006351	alyref	97	54.152	Amphilophus_citrinellus
ENSMZEG00005012096	-	100	69.582	ENSAOCG00000019305	-	100	69.582	Amphiprion_ocellaris
ENSMZEG00005012096	-	100	54.643	ENSAOCG00000014012	alyref	100	55.714	Amphiprion_ocellaris
ENSMZEG00005012096	-	100	54.643	ENSAPEG00000014603	alyref	100	55.714	Amphiprion_percula
ENSMZEG00005012096	-	100	70.342	ENSAPEG00000013527	-	100	69.202	Amphiprion_percula
ENSMZEG00005012096	-	100	51.748	ENSATEG00000004307	alyref	100	52.632	Anabas_testudineus
ENSMZEG00005012096	-	100	67.547	ENSATEG00000000382	-	100	67.170	Anabas_testudineus
ENSMZEG00005012096	-	52	59.854	ENSAPLG00000014745	-	97	62.044	Anas_platyrhynchos
ENSMZEG00005012096	-	100	98.851	ENSACLG00000010184	-	100	98.851	Astatotilapia_calliptera
ENSMZEG00005012096	-	100	52.313	ENSACLG00000008432	alyref	100	53.901	Astatotilapia_calliptera
ENSMZEG00005012096	-	100	53.846	ENSAMXG00000007359	alyref	100	53.125	Astyanax_mexicanus
ENSMZEG00005012096	-	68	47.027	ENSCING00000013568	-	98	42.222	Ciona_intestinalis
ENSMZEG00005012096	-	98	43.396	ENSCSAVG00000003324	-	98	44.444	Ciona_savignyi
ENSMZEG00005012096	-	100	54.839	ENSCSEG00000017800	alyref	100	55.396	Cynoglossus_semilaevis
ENSMZEG00005012096	-	100	54.874	ENSCVAG00000014869	alyref	100	54.122	Cyprinodon_variegatus
ENSMZEG00005012096	-	100	61.742	ENSCVAG00000007789	-	100	62.121	Cyprinodon_variegatus
ENSMZEG00005012096	-	100	56.944	ENSDARG00000077732	alyref	100	56.446	Danio_rerio
ENSMZEG00005012096	-	99	39.322	FBgn0010774	Ref1	100	31.908	Drosophila_melanogaster
ENSMZEG00005012096	-	98	46.840	ENSEBUG00000008253	alyref	96	41.844	Eptatretus_burgeri
ENSMZEG00005012096	-	100	43.295	ENSEBUG00000006305	alyref	100	40.000	Eptatretus_burgeri
ENSMZEG00005012096	-	100	54.093	ENSELUG00000017178	alyref	100	53.929	Esox_lucius
ENSMZEG00005012096	-	100	61.111	ENSELUG00000008849	-	100	60.370	Esox_lucius
ENSMZEG00005012096	-	60	61.963	ENSFALG00000011923	-	94	64.286	Ficedula_albicollis
ENSMZEG00005012096	-	100	54.122	ENSFHEG00000019426	alyref	100	55.396	Fundulus_heteroclitus
ENSMZEG00005012096	-	100	62.500	ENSFHEG00000004698	-	100	63.636	Fundulus_heteroclitus
ENSMZEG00005012096	-	100	51.449	ENSGMOG00000009882	alyref	100	51.087	Gadus_morhua
ENSMZEG00005012096	-	73	63.265	ENSGMOG00000013122	-	100	59.898	Gadus_morhua
ENSMZEG00005012096	-	100	60.227	ENSGAFG00000007573	-	100	57.955	Gambusia_affinis
ENSMZEG00005012096	-	100	52.962	ENSGAFG00000006014	alyref	100	52.817	Gambusia_affinis
ENSMZEG00005012096	-	100	52.313	ENSHBUG00000020196	alyref	100	53.901	Haplochromis_burtoni
ENSMZEG00005012096	-	100	96.981	ENSHBUG00000001454	-	100	96.981	Haplochromis_burtoni
ENSMZEG00005012096	-	98	61.154	ENSHCOG00000012825	-	94	59.922	Hippocampus_comes
ENSMZEG00005012096	-	100	57.394	ENSIPUG00000009469	alyref	99	56.584	Ictalurus_punctatus
ENSMZEG00005012096	-	79	53.991	ENSSTOG00000016570	-	99	53.810	Ictidomys_tridecemlineatus
ENSMZEG00005012096	-	100	53.025	ENSKMAG00000008912	alyref	100	56.383	Kryptolebias_marmoratus
ENSMZEG00005012096	-	100	64.773	ENSKMAG00000006462	-	100	64.394	Kryptolebias_marmoratus
ENSMZEG00005012096	-	100	64.769	ENSLBEG00000005387	-	100	64.057	Labrus_bergylta
ENSMZEG00005012096	-	98	65.267	ENSLBEG00000012930	-	99	64.639	Labrus_bergylta
ENSMZEG00005012096	-	97	55.294	ENSLBEG00000023118	alyref	88	57.087	Labrus_bergylta
ENSMZEG00005012096	-	83	55.909	ENSLOCG00000013879	alyref	88	55.405	Lepisosteus_oculatus
ENSMZEG00005012096	-	100	66.160	ENSMAMG00000005464	-	100	65.779	Mastacembelus_armatus
ENSMZEG00005012096	-	100	54.804	ENSMAMG00000003034	alyref	100	53.929	Mastacembelus_armatus
ENSMZEG00005012096	-	100	52.313	ENSMZEG00005008639	alyref	100	53.901	Maylandia_zebra
ENSMZEG00005012096	-	99	53.704	ENSMMOG00000007032	-	100	52.222	Mola_mola
ENSMZEG00005012096	-	98	53.480	ENSMMOG00000012458	alyref	96	55.273	Mola_mola
ENSMZEG00005012096	-	100	67.658	ENSMALG00000006054	-	100	64.552	Monopterus_albus
ENSMZEG00005012096	-	97	42.500	ENSMLUG00000009247	-	98	43.796	Myotis_lucifugus
ENSMZEG00005012096	-	100	48.454	ENSMLUG00000014372	-	100	47.183	Myotis_lucifugus
ENSMZEG00005012096	-	97	44.444	ENSMLUG00000022178	-	69	51.256	Myotis_lucifugus
ENSMZEG00005012096	-	100	48.057	ENSMLUG00000004098	-	100	47.292	Myotis_lucifugus
ENSMZEG00005012096	-	97	44.366	ENSMLUG00000030671	-	68	51.010	Myotis_lucifugus
ENSMZEG00005012096	-	76	50.251	ENSMLUG00000028605	-	98	43.816	Myotis_lucifugus
ENSMZEG00005012096	-	100	48.410	ENSMLUG00000006521	-	100	48.582	Myotis_lucifugus
ENSMZEG00005012096	-	97	43.253	ENSMLUG00000022467	-	70	48.309	Myotis_lucifugus
ENSMZEG00005012096	-	100	54.023	ENSNGAG00000022014	-	100	54.753	Nannospalax_galili
ENSMZEG00005012096	-	100	97.318	ENSNBRG00000017460	-	100	97.318	Neolamprologus_brichardi
ENSMZEG00005012096	-	100	51.943	ENSNBRG00000001747	alyref	100	52.817	Neolamprologus_brichardi
ENSMZEG00005012096	-	100	52.098	ENSONIG00000019434	alyref	100	52.797	Oreochromis_niloticus
ENSMZEG00005012096	-	100	94.297	ENSONIG00000003296	-	100	94.297	Oreochromis_niloticus
ENSMZEG00005012096	-	98	56.721	ENSORLG00000001620	-	88	54.934	Oryzias_latipes
ENSMZEG00005012096	-	99	67.300	ENSORLG00020015673	-	99	64.259	Oryzias_latipes_hni
ENSMZEG00005012096	-	100	49.831	ENSORLG00020011942	alyref	100	52.837	Oryzias_latipes_hni
ENSMZEG00005012096	-	99	69.697	ENSORLG00015015143	-	99	66.920	Oryzias_latipes_hsok
ENSMZEG00005012096	-	100	50.171	ENSORLG00015022664	alyref	100	52.857	Oryzias_latipes_hsok
ENSMZEG00005012096	-	100	65.530	ENSOMEG00000007158	-	99	63.118	Oryzias_melastigma
ENSMZEG00005012096	-	100	54.093	ENSOMEG00000019176	alyref	100	54.317	Oryzias_melastigma
ENSMZEG00005012096	-	73	59.474	ENSPPAG00000036403	-	67	58.421	Pan_paniscus
ENSMZEG00005012096	-	98	54.444	ENSPKIG00000006233	-	80	54.924	Paramormyrops_kingsleyae
ENSMZEG00005012096	-	100	54.930	ENSPKIG00000007070	alyref	100	53.710	Paramormyrops_kingsleyae
ENSMZEG00005012096	-	66	59.195	ENSPMGG00000012994	-	93	58.382	Periophthalmus_magnuspinnatus
ENSMZEG00005012096	-	97	50.355	ENSPMGG00000016600	alyref	89	54.244	Periophthalmus_magnuspinnatus
ENSMZEG00005012096	-	100	53.788	ENSPEMG00000016628	-	100	52.107	Peromyscus_maniculatus_bairdii
ENSMZEG00005012096	-	100	53.846	ENSPFOG00000022825	alyref	99	53.521	Poecilia_formosa
ENSMZEG00005012096	-	100	61.364	ENSPFOG00000017094	-	100	62.121	Poecilia_formosa
ENSMZEG00005012096	-	100	54.737	ENSPLAG00000006948	alyref	100	53.710	Poecilia_latipinna
ENSMZEG00005012096	-	100	61.364	ENSPLAG00000014380	-	100	62.121	Poecilia_latipinna
ENSMZEG00005012096	-	100	53.846	ENSPMEG00000003547	alyref	100	53.521	Poecilia_mexicana
ENSMZEG00005012096	-	100	61.364	ENSPMEG00000023039	-	100	62.121	Poecilia_mexicana
ENSMZEG00005012096	-	100	60.377	ENSPREG00000003649	-	100	61.132	Poecilia_reticulata
ENSMZEG00005012096	-	100	54.737	ENSPREG00000015795	alyref	100	53.710	Poecilia_reticulata
ENSMZEG00005012096	-	100	52.313	ENSPNYG00000017498	alyref	100	53.901	Pundamilia_nyererei
ENSMZEG00005012096	-	98	93.750	ENSPNYG00000002879	-	98	93.774	Pundamilia_nyererei
ENSMZEG00005012096	-	100	50.508	ENSPNAG00000002531	alyref	100	51.379	Pygocentrus_nattereri
ENSMZEG00005012096	-	75	58.883	ENSSBOG00000030924	-	84	57.868	Saimiri_boliviensis_boliviensis
ENSMZEG00005012096	-	99	46.718	ENSSHAG00000000609	-	98	44.706	Sarcophilus_harrisii
ENSMZEG00005012096	-	99	42.321	ENSSHAG00000012866	-	73	47.573	Sarcophilus_harrisii
ENSMZEG00005012096	-	83	59.545	ENSSFOG00015003923	alyref	72	59.174	Scleropages_formosus
ENSMZEG00005012096	-	73	57.868	ENSSFOG00015003678	alyref	83	58.549	Scleropages_formosus
ENSMZEG00005012096	-	100	65.672	ENSSMAG00000011169	-	100	67.164	Scophthalmus_maximus
ENSMZEG00005012096	-	100	54.770	ENSSMAG00000009283	alyref	100	55.477	Scophthalmus_maximus
ENSMZEG00005012096	-	100	54.643	ENSSDUG00000016158	alyref	100	56.071	Seriola_dumerili
ENSMZEG00005012096	-	100	52.482	ENSSLDG00000017803	alyref	100	54.093	Seriola_lalandi_dorsalis
ENSMZEG00005012096	-	98	70.270	ENSSPAG00000017028	-	96	72.481	Stegastes_partitus
ENSMZEG00005012096	-	100	61.765	ENSTRUG00000003051	-	100	59.559	Takifugu_rubripes
ENSMZEG00005012096	-	100	48.789	ENSTNIG00000011595	alyref	100	53.558	Tetraodon_nigroviridis
ENSMZEG00005012096	-	100	62.264	ENSTNIG00000014136	-	100	56.818	Tetraodon_nigroviridis
ENSMZEG00005012096	-	76	59.091	ENSVVUG00000000272	-	90	56.279	Vulpes_vulpes
ENSMZEG00005012096	-	98	52.297	ENSXCOG00000018047	alyref	98	52.143	Xiphophorus_couchianus
ENSMZEG00005012096	-	100	61.742	ENSXMAG00000018086	-	100	62.121	Xiphophorus_maculatus
ENSMZEG00005012096	-	98	52.297	ENSXMAG00000012218	alyref	98	52.143	Xiphophorus_maculatus