EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005012460 (Gene tree)
Gene ID: 101479484
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 7753 bases
Position: chrLG22:25106120-25113872
Accession: 101479484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005016580	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005017113	-	5903	XM_004564405	ENSMZEP00005016580	265 (aa)	XP_004564462	UPI00032A25E2

Gene Model

Click here to download ENSMZEG00005012460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005012460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005012460	rab42a	82	96.330	ENSAPOG00000009188	rab42a	100	96.789	Acanthochromis_polyacanthus
ENSMZEG00005012460	rab42a	82	97.248	ENSACIG00000003102	rab42a	100	97.248	Amphilophus_citrinellus
ENSMZEG00005012460	rab42a	89	94.915	ENSAOCG00000012921	rab42a	94	94.737	Amphiprion_ocellaris
ENSMZEG00005012460	rab42a	89	94.915	ENSAPEG00000007713	rab42a	94	94.737	Amphiprion_percula
ENSMZEG00005012460	rab42a	82	94.954	ENSATEG00000009052	rab42a	100	94.954	Anabas_testudineus
ENSMZEG00005012460	rab42a	82	100.000	ENSACLG00000007514	rab42a	100	100.000	Astatotilapia_calliptera
ENSMZEG00005012460	rab42a	82	91.705	ENSAMXG00000032729	rab42a	100	91.705	Astyanax_mexicanus
ENSMZEG00005012460	rab42a	82	93.578	ENSCSEG00000010582	rab42a	100	93.578	Cynoglossus_semilaevis
ENSMZEG00005012460	rab42a	82	91.244	ENSDARG00000034215	rab42a	100	91.244	Danio_rerio
ENSMZEG00005012460	rab42a	74	49.746	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSMZEG00005012460	rab42a	82	90.783	ENSELUG00000010345	rab42a	100	90.783	Esox_lucius
ENSMZEG00005012460	rab42a	82	95.413	ENSFHEG00000013106	rab42a	100	95.413	Fundulus_heteroclitus
ENSMZEG00005012460	rab42a	82	94.037	ENSGAFG00000002141	rab42a	100	94.037	Gambusia_affinis
ENSMZEG00005012460	rab42a	100	100.000	ENSHBUG00000015126	rab42a	100	100.000	Haplochromis_burtoni
ENSMZEG00005012460	rab42a	82	88.479	ENSIPUG00000011376	rab42a	100	88.479	Ictalurus_punctatus
ENSMZEG00005012460	rab42a	82	94.495	ENSKMAG00000007267	rab42a	100	94.495	Kryptolebias_marmoratus
ENSMZEG00005012460	rab42a	82	95.392	ENSLBEG00000001193	rab42a	100	95.392	Labrus_bergylta
ENSMZEG00005012460	rab42a	82	64.055	ENSLACG00000012755	-	100	64.055	Latimeria_chalumnae
ENSMZEG00005012460	rab42a	82	50.917	ENSLOCG00000015825	-	99	50.917	Lepisosteus_oculatus
ENSMZEG00005012460	rab42a	82	83.410	ENSLOCG00000003453	rab42a	100	83.410	Lepisosteus_oculatus
ENSMZEG00005012460	rab42a	82	97.248	ENSMAMG00000002296	rab42a	100	97.248	Mastacembelus_armatus
ENSMZEG00005012460	rab42a	82	93.119	ENSMMOG00000014358	rab42a	100	93.119	Mola_mola
ENSMZEG00005012460	rab42a	100	98.872	ENSNBRG00000021487	rab42a	100	98.872	Neolamprologus_brichardi
ENSMZEG00005012460	rab42a	82	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSMZEG00005012460	rab42a	82	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSMZEG00005012460	rab42a	82	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSMZEG00005012460	rab42a	82	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSMZEG00005012460	rab42a	81	47.685	ENSPKIG00000015234	-	99	47.685	Paramormyrops_kingsleyae
ENSMZEG00005012460	rab42a	82	77.419	ENSPKIG00000021215	-	100	77.419	Paramormyrops_kingsleyae
ENSMZEG00005012460	rab42a	74	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSMZEG00005012460	rab42a	95	85.156	ENSPFOG00000004838	rab42a	96	85.156	Poecilia_formosa
ENSMZEG00005012460	rab42a	82	94.037	ENSPLAG00000005628	rab42a	100	94.037	Poecilia_latipinna
ENSMZEG00005012460	rab42a	82	93.578	ENSPMEG00000019497	rab42a	100	93.578	Poecilia_mexicana
ENSMZEG00005012460	rab42a	82	94.037	ENSPREG00000013962	rab42a	100	94.037	Poecilia_reticulata
ENSMZEG00005012460	rab42a	100	100.000	ENSPNYG00000010325	rab42a	100	100.000	Pundamilia_nyererei
ENSMZEG00005012460	rab42a	82	91.244	ENSPNAG00000016567	rab42a	100	91.244	Pygocentrus_nattereri
ENSMZEG00005012460	rab42a	82	46.330	ENSSFOG00015016000	-	97	46.330	Scleropages_formosus
ENSMZEG00005012460	rab42a	82	85.714	ENSSFOG00015020732	rab42a	100	85.714	Scleropages_formosus
ENSMZEG00005012460	rab42a	82	94.037	ENSSMAG00000020311	rab42a	100	94.037	Scophthalmus_maximus
ENSMZEG00005012460	rab42a	82	96.330	ENSSDUG00000011851	rab42a	100	96.330	Seriola_dumerili
ENSMZEG00005012460	rab42a	82	96.330	ENSSLDG00000020354	rab42a	100	96.330	Seriola_lalandi_dorsalis
ENSMZEG00005012460	rab42a	82	97.706	ENSSPAG00000016167	rab42a	100	97.706	Stegastes_partitus
ENSMZEG00005012460	rab42a	82	95.872	ENSTRUG00000010224	rab42a	100	95.872	Takifugu_rubripes
ENSMZEG00005012460	rab42a	82	94.495	ENSXCOG00000003428	rab42a	100	94.495	Xiphophorus_couchianus
ENSMZEG00005012460	rab42a	82	94.495	ENSXMAG00000028376	rab42a	100	94.495	Xiphophorus_maculatus