EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005012696 (Gene tree)
Gene ID: 101486167
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 13733 bases
Position: chrLG23:18014403-18028135
Accession: 101486167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005016930	IF-2	PF11987.8	7.2e-19	1	1
ENSMZEP00005016895	IF-2	PF11987.8	7.6e-19	1	1
ENSMZEP00005016930	GTP_EFTU	PF00009.27	8.7e-34	1	1
ENSMZEP00005016895	GTP_EFTU	PF00009.27	8.9e-34	1	1
ENSMZEP00005016930	MMR_HSR1	PF01926.23	2.4e-06	1	1
ENSMZEP00005016895	MMR_HSR1	PF01926.23	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005017470	-	5208	XM_004565610	ENSMZEP00005016930	1199 (aa)	XP_004565667	UPI000329AE5E
ENSMZET00005017435	-	5247	XM_012923087	ENSMZEP00005016895	1212 (aa)	XP_012778541	UPI0006468C1F

Gene Model

Click here to download ENSMZEG00005012696's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005012696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005012696	eif5b	100	84.826	ENSAPOG00000004375	eif5b	100	85.489	Acanthochromis_polyacanthus
ENSMZEG00005012696	eif5b	81	93.046	ENSACIG00000024324	eif5b	90	91.404	Amphilophus_citrinellus
ENSMZEG00005012696	eif5b	100	85.158	ENSAOCG00000018386	eif5b	100	84.577	Amphiprion_ocellaris
ENSMZEG00005012696	eif5b	62	93.210	ENSATEG00000011451	-	77	92.130	Anabas_testudineus
ENSMZEG00005012696	eif5b	100	86.198	ENSATEG00000006765	eif5b	98	84.876	Anabas_testudineus
ENSMZEG00005012696	eif5b	73	85.358	ENSATEG00000011259	eif5b	92	85.714	Anabas_testudineus
ENSMZEG00005012696	eif5b	100	68.237	ENSACAG00000008305	-	52	87.621	Anolis_carolinensis
ENSMZEG00005012696	eif5b	76	97.368	ENSACLG00000005530	eif5b	93	90.949	Astatotilapia_calliptera
ENSMZEG00005012696	eif5b	94	93.891	ENSAMXG00000018383	eif5b	74	83.408	Astyanax_mexicanus
ENSMZEG00005012696	eif5b	52	57.556	WBGene00021857	iffb-1	58	57.556	Caenorhabditis_elegans
ENSMZEG00005012696	eif5b	97	62.991	ENSCJAG00000009960	-	71	71.461	Callithrix_jacchus
ENSMZEG00005012696	eif5b	99	63.495	ENSCAPG00000014619	-	51	81.833	Cavia_aperea
ENSMZEG00005012696	eif5b	100	67.367	ENSCPOG00000011967	-	72	76.036	Cavia_porcellus
ENSMZEG00005012696	eif5b	56	63.676	ENSCHOG00000002137	-	67	64.088	Choloepus_hoffmanni
ENSMZEG00005012696	eif5b	51	63.961	ENSCSAVG00000008808	-	66	63.961	Ciona_savignyi
ENSMZEG00005012696	eif5b	52	93.900	ENSCSEG00000014153	eif5b	74	86.083	Cynoglossus_semilaevis
ENSMZEG00005012696	eif5b	74	89.147	ENSCVAG00000019619	eif5b	74	89.640	Cyprinodon_variegatus
ENSMZEG00005012696	eif5b	100	74.077	ENSDARG00000016548	eif5b	70	84.667	Danio_rerio
ENSMZEG00005012696	eif5b	51	70.636	FBgn0026259	eIF5B	54	70.636	Drosophila_melanogaster
ENSMZEG00005012696	eif5b	82	92.407	ENSELUG00000001132	eif5b	58	92.407	Esox_lucius
ENSMZEG00005012696	eif5b	73	78.434	ENSGMOG00000002031	eif5b	72	77.474	Gadus_morhua
ENSMZEG00005012696	eif5b	80	94.444	ENSGAFG00000000088	eif5b	72	94.444	Gambusia_affinis
ENSMZEG00005012696	eif5b	82	82.966	ENSGACG00000010536	eif5b	89	92.284	Gasterosteus_aculeatus
ENSMZEG00005012696	eif5b	55	84.650	ENSGAGG00000022242	-	92	87.621	Gopherus_agassizii
ENSMZEG00005012696	eif5b	100	99.835	ENSHBUG00000023319	eif5b	100	99.835	Haplochromis_burtoni
ENSMZEG00005012696	eif5b	100	79.785	ENSHCOG00000002807	eif5b	100	79.008	Hippocampus_comes
ENSMZEG00005012696	eif5b	100	72.905	ENSIPUG00000020910	eif5b	76	84.181	Ictalurus_punctatus
ENSMZEG00005012696	eif5b	100	84.590	ENSKMAG00000004325	eif5b	100	85.112	Kryptolebias_marmoratus
ENSMZEG00005012696	eif5b	89	80.389	ENSLBEG00000027090	eif5b	99	80.571	Labrus_bergylta
ENSMZEG00005012696	eif5b	93	87.580	ENSLACG00000011688	eif5b	73	78.111	Latimeria_chalumnae
ENSMZEG00005012696	eif5b	100	86.617	ENSMAMG00000022568	eif5b	100	85.949	Mastacembelus_armatus
ENSMZEG00005012696	eif5b	89	67.712	ENSMODG00000001387	-	73	74.103	Monodelphis_domestica
ENSMZEG00005012696	eif5b	100	84.450	ENSMALG00000005862	eif5b	100	85.136	Monopterus_albus
ENSMZEG00005012696	eif5b	92	94.869	ENSNBRG00000021912	eif5b	95	94.869	Neolamprologus_brichardi
ENSMZEG00005012696	eif5b	78	85.664	ENSMEUG00000007080	-	62	85.664	Notamacropus_eugenii
ENSMZEG00005012696	eif5b	100	97.920	ENSONIG00000018749	eif5b	100	97.920	Oreochromis_niloticus
ENSMZEG00005012696	eif5b	93	87.621	ENSOCUG00000021154	-	73	77.227	Oryctolagus_cuniculus
ENSMZEG00005012696	eif5b	100	83.237	ENSORLG00000001525	eif5b	100	82.656	Oryzias_latipes
ENSMZEG00005012696	eif5b	100	83.237	ENSORLG00020005327	eif5b	100	82.753	Oryzias_latipes_hni
ENSMZEG00005012696	eif5b	100	83.154	ENSORLG00015008949	eif5b	100	82.504	Oryzias_latipes_hsok
ENSMZEG00005012696	eif5b	66	90.013	ENSOMEG00000016539	eif5b	99	89.899	Oryzias_melastigma
ENSMZEG00005012696	eif5b	100	72.632	ENSPKIG00000011133	eif5b	73	83.221	Paramormyrops_kingsleyae
ENSMZEG00005012696	eif5b	57	76.989	ENSPSIG00000014914	-	93	76.387	Pelodiscus_sinensis
ENSMZEG00005012696	eif5b	74	64.286	ENSPMAG00000004508	eif5b	52	75.723	Petromyzon_marinus
ENSMZEG00005012696	eif5b	61	89.782	ENSPFOG00000007543	eif5b	100	89.782	Poecilia_formosa
ENSMZEG00005012696	eif5b	100	82.544	ENSPLAG00000015913	eif5b	100	81.894	Poecilia_latipinna
ENSMZEG00005012696	eif5b	100	82.724	ENSPMEG00000006712	eif5b	100	81.977	Poecilia_mexicana
ENSMZEG00005012696	eif5b	66	70.486	ENSPCAG00000007829	-	70	70.544	Procavia_capensis
ENSMZEG00005012696	eif5b	88	68.022	ENSPCOG00000019508	-	99	86.452	Propithecus_coquereli
ENSMZEG00005012696	eif5b	92	95.672	ENSPNYG00000021051	eif5b	96	95.672	Pundamilia_nyererei
ENSMZEG00005012696	eif5b	73	84.157	ENSPNAG00000023852	eif5b	73	83.784	Pygocentrus_nattereri
ENSMZEG00005012696	eif5b	100	73.553	ENSSFOG00015000594	eif5b	100	73.484	Scleropages_formosus
ENSMZEG00005012696	eif5b	85	77.996	ENSSMAG00000000045	eif5b	81	85.697	Scophthalmus_maximus
ENSMZEG00005012696	eif5b	69	90.986	ENSSDUG00000005847	eif5b	80	91.626	Seriola_dumerili
ENSMZEG00005012696	eif5b	69	91.226	ENSSLDG00000013738	eif5b	95	91.122	Seriola_lalandi_dorsalis
ENSMZEG00005012696	eif5b	82	90.031	ENSSPAG00000005335	eif5b	80	81.327	Stegastes_partitus
ENSMZEG00005012696	eif5b	68	81.818	ENSTRUG00000007772	eif5b	81	81.332	Takifugu_rubripes
ENSMZEG00005012696	eif5b	75	79.113	ENSTNIG00000006580	eif5b	95	81.506	Tetraodon_nigroviridis
ENSMZEG00005012696	eif5b	67	91.266	ENSTBEG00000009133	-	56	91.266	Tupaia_belangeri
ENSMZEG00005012696	eif5b	73	84.187	ENSXCOG00000016681	eif5b	94	83.409	Xiphophorus_couchianus
ENSMZEG00005012696	eif5b	73	84.379	ENSXMAG00000001002	eif5b	94	83.599	Xiphophorus_maculatus