EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005012899 (Gene tree)
Gene ID: 101479043
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 14094 bases
Position: chrLG2:23381135-23395228
Accession: 101479043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005017174	Exo_endo_phos	PF03372.23	3.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005017719	-	6633	XM_004571706	ENSMZEP00005017174	559 (aa)	XP_004571763	UPI00032A3E03

Gene Model

Click here to download ENSMZEG00005012899's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005012899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005012899	cnot6b	100	85.689	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSMZEG00005012899	cnot6b	100	96.959	ENSAPOG00000009994	cnot6b	100	96.959	Acanthochromis_polyacanthus
ENSMZEG00005012899	cnot6b	100	85.740	ENSAMEG00000000949	CNOT6	99	84.848	Ailuropoda_melanoleuca
ENSMZEG00005012899	cnot6b	100	96.243	ENSACIG00000016566	cnot6b	100	96.243	Amphilophus_citrinellus
ENSMZEG00005012899	cnot6b	100	96.959	ENSAOCG00000006893	cnot6b	100	96.959	Amphiprion_ocellaris
ENSMZEG00005012899	cnot6b	100	96.959	ENSAPEG00000016949	cnot6b	100	96.959	Amphiprion_percula
ENSMZEG00005012899	cnot6b	100	93.739	ENSATEG00000007862	cnot6b	100	93.739	Anabas_testudineus
ENSMZEG00005012899	cnot6b	100	86.225	ENSAPLG00000012715	CNOT6	99	85.689	Anas_platyrhynchos
ENSMZEG00005012899	cnot6b	100	86.762	ENSACAG00000016548	CNOT6	100	85.689	Anolis_carolinensis
ENSMZEG00005012899	cnot6b	100	85.689	ENSANAG00000030436	CNOT6	96	84.794	Aotus_nancymaae
ENSMZEG00005012899	cnot6b	100	100.000	ENSACLG00000008279	cnot6b	100	100.000	Astatotilapia_calliptera
ENSMZEG00005012899	cnot6b	100	88.909	ENSAMXG00000034694	cnot6b	100	87.835	Astyanax_mexicanus
ENSMZEG00005012899	cnot6b	100	90.161	ENSAMXG00000019140	cnot6a	100	89.982	Astyanax_mexicanus
ENSMZEG00005012899	cnot6b	100	86.047	ENSBTAG00000017362	CNOT6	100	85.152	Bos_taurus
ENSMZEG00005012899	cnot6b	100	85.510	ENSCJAG00000009795	CNOT6	100	84.615	Callithrix_jacchus
ENSMZEG00005012899	cnot6b	100	86.047	ENSCAFG00000000464	CNOT6	100	85.152	Canis_familiaris
ENSMZEG00005012899	cnot6b	100	86.047	ENSCAFG00020002441	CNOT6	100	85.152	Canis_lupus_dingo
ENSMZEG00005012899	cnot6b	100	85.689	ENSCHIG00000019100	CNOT6	100	84.794	Capra_hircus
ENSMZEG00005012899	cnot6b	100	84.794	ENSTSYG00000003982	CNOT6	100	83.900	Carlito_syrichta
ENSMZEG00005012899	cnot6b	100	81.216	ENSCPOG00000035657	CNOT6	100	80.322	Cavia_porcellus
ENSMZEG00005012899	cnot6b	100	81.216	ENSCCAG00000033670	CNOT6	100	80.322	Cebus_capucinus
ENSMZEG00005012899	cnot6b	100	85.689	ENSCATG00000042014	CNOT6	100	84.794	Cercocebus_atys
ENSMZEG00005012899	cnot6b	100	84.615	ENSCLAG00000010489	CNOT6	100	83.721	Chinchilla_lanigera
ENSMZEG00005012899	cnot6b	100	85.689	ENSCSAG00000008165	CNOT6	100	84.794	Chlorocebus_sabaeus
ENSMZEG00005012899	cnot6b	100	85.331	ENSCHOG00000009680	CNOT6	100	84.794	Choloepus_hoffmanni
ENSMZEG00005012899	cnot6b	100	86.404	ENSCPBG00000008908	CNOT6	100	85.868	Chrysemys_picta_bellii
ENSMZEG00005012899	cnot6b	100	85.868	ENSCANG00000026756	CNOT6	100	84.973	Colobus_angolensis_palliatus
ENSMZEG00005012899	cnot6b	100	84.436	ENSCGRG00001011452	Cnot6	100	83.542	Cricetulus_griseus_chok1gshd
ENSMZEG00005012899	cnot6b	100	82.290	ENSCGRG00000010407	Cnot6	100	81.395	Cricetulus_griseus_crigri
ENSMZEG00005012899	cnot6b	100	96.959	ENSCSEG00000010939	cnot6b	100	96.959	Cynoglossus_semilaevis
ENSMZEG00005012899	cnot6b	100	94.454	ENSCVAG00000010538	cnot6b	100	94.454	Cyprinodon_variegatus
ENSMZEG00005012899	cnot6b	100	87.299	ENSDARG00000101072	cnot6b	100	87.120	Danio_rerio
ENSMZEG00005012899	cnot6b	100	89.982	ENSDARG00000008255	cnot6a	100	89.803	Danio_rerio
ENSMZEG00005012899	cnot6b	100	86.583	ENSDNOG00000041644	CNOT6	100	85.689	Dasypus_novemcinctus
ENSMZEG00005012899	cnot6b	100	77.460	ENSDORG00000001708	Cnot6	100	76.565	Dipodomys_ordii
ENSMZEG00005012899	cnot6b	100	69.107	ENSETEG00000006975	CNOT6	100	68.214	Echinops_telfairi
ENSMZEG00005012899	cnot6b	90	80.876	ENSEASG00005012957	-	99	80.080	Equus_asinus_asinus
ENSMZEG00005012899	cnot6b	100	85.868	ENSEASG00005012794	-	100	84.973	Equus_asinus_asinus
ENSMZEG00005012899	cnot6b	100	81.216	ENSECAG00000012704	-	99	80.322	Equus_caballus
ENSMZEG00005012899	cnot6b	100	86.404	ENSECAG00000019325	CNOT6	100	85.510	Equus_caballus
ENSMZEG00005012899	cnot6b	100	85.152	ENSEEUG00000015382	CNOT6	100	84.258	Erinaceus_europaeus
ENSMZEG00005012899	cnot6b	100	86.583	ENSELUG00000024580	cnot6a	100	86.047	Esox_lucius
ENSMZEG00005012899	cnot6b	100	88.889	ENSELUG00000015981	cnot6b	99	87.831	Esox_lucius
ENSMZEG00005012899	cnot6b	100	86.225	ENSFCAG00000001881	CNOT6	100	85.331	Felis_catus
ENSMZEG00005012899	cnot6b	100	86.404	ENSFALG00000007699	CNOT6	100	85.868	Ficedula_albicollis
ENSMZEG00005012899	cnot6b	100	84.436	ENSFDAG00000001999	CNOT6	100	83.542	Fukomys_damarensis
ENSMZEG00005012899	cnot6b	68	93.125	ENSFHEG00000013756	cnot6b	99	93.125	Fundulus_heteroclitus
ENSMZEG00005012899	cnot6b	95	92.817	ENSGMOG00000009767	cnot6b	99	92.817	Gadus_morhua
ENSMZEG00005012899	cnot6b	100	86.225	ENSGALG00000034316	CNOT6	100	85.689	Gallus_gallus
ENSMZEG00005012899	cnot6b	100	94.454	ENSGAFG00000008525	cnot6b	100	94.454	Gambusia_affinis
ENSMZEG00005012899	cnot6b	95	92.817	ENSGACG00000018046	cnot6b	99	92.817	Gasterosteus_aculeatus
ENSMZEG00005012899	cnot6b	100	71.429	ENSGAGG00000012176	CNOT6	100	70.893	Gopherus_agassizii
ENSMZEG00005012899	cnot6b	100	85.689	ENSGGOG00000003675	CNOT6	100	84.794	Gorilla_gorilla
ENSMZEG00005012899	cnot6b	100	99.821	ENSHBUG00000002819	cnot6b	100	99.821	Haplochromis_burtoni
ENSMZEG00005012899	cnot6b	100	84.436	ENSHGLG00000017756	CNOT6	100	83.542	Heterocephalus_glaber_female
ENSMZEG00005012899	cnot6b	100	84.436	ENSHGLG00100005747	CNOT6	100	83.542	Heterocephalus_glaber_male
ENSMZEG00005012899	cnot6b	100	94.812	ENSHCOG00000016176	cnot6b	100	94.812	Hippocampus_comes
ENSMZEG00005012899	cnot6b	100	89.267	ENSIPUG00000019831	cnot6a	100	89.267	Ictalurus_punctatus
ENSMZEG00005012899	cnot6b	100	89.088	ENSIPUG00000017482	cnot6b	100	88.193	Ictalurus_punctatus
ENSMZEG00005012899	cnot6b	100	85.510	ENSSTOG00000002803	CNOT6	100	84.615	Ictidomys_tridecemlineatus
ENSMZEG00005012899	cnot6b	100	84.973	ENSJJAG00000012296	Cnot6	100	84.079	Jaculus_jaculus
ENSMZEG00005012899	cnot6b	100	94.812	ENSKMAG00000004640	cnot6b	100	94.812	Kryptolebias_marmoratus
ENSMZEG00005012899	cnot6b	100	95.528	ENSLBEG00000027917	cnot6b	100	95.528	Labrus_bergylta
ENSMZEG00005012899	cnot6b	100	92.844	ENSLOCG00000010102	cnot6b	99	92.129	Lepisosteus_oculatus
ENSMZEG00005012899	cnot6b	100	86.583	ENSLAFG00000016742	CNOT6	100	85.689	Loxodonta_africana
ENSMZEG00005012899	cnot6b	100	85.689	ENSMFAG00000030867	CNOT6	100	84.794	Macaca_fascicularis
ENSMZEG00005012899	cnot6b	100	85.689	ENSMMUG00000018690	CNOT6	100	84.794	Macaca_mulatta
ENSMZEG00005012899	cnot6b	100	85.689	ENSMNEG00000038565	CNOT6	100	84.794	Macaca_nemestrina
ENSMZEG00005012899	cnot6b	100	85.689	ENSMLEG00000010555	CNOT6	100	84.794	Mandrillus_leucophaeus
ENSMZEG00005012899	cnot6b	100	96.780	ENSMAMG00000007515	cnot6b	100	96.780	Mastacembelus_armatus
ENSMZEG00005012899	cnot6b	100	84.973	ENSMAUG00000019798	Cnot6	100	84.079	Mesocricetus_auratus
ENSMZEG00005012899	cnot6b	100	84.436	ENSMICG00000013018	-	100	83.542	Microcebus_murinus
ENSMZEG00005012899	cnot6b	98	78.022	ENSMICG00000028378	-	99	77.106	Microcebus_murinus
ENSMZEG00005012899	cnot6b	100	84.973	ENSMOCG00000021662	Cnot6	100	84.079	Microtus_ochrogaster
ENSMZEG00005012899	cnot6b	100	92.665	ENSMMOG00000003227	cnot6b	100	92.129	Mola_mola
ENSMZEG00005012899	cnot6b	100	86.047	ENSMODG00000003979	CNOT6	100	85.510	Monodelphis_domestica
ENSMZEG00005012899	cnot6b	100	96.959	ENSMALG00000014251	cnot6b	100	96.959	Monopterus_albus
ENSMZEG00005012899	cnot6b	100	85.152	MGP_CAROLIEiJ_G0016277	Cnot6	100	84.258	Mus_caroli
ENSMZEG00005012899	cnot6b	100	85.152	ENSMUSG00000020362	Cnot6	100	84.258	Mus_musculus
ENSMZEG00005012899	cnot6b	100	85.152	MGP_PahariEiJ_G0017413	Cnot6	100	84.258	Mus_pahari
ENSMZEG00005012899	cnot6b	100	85.152	MGP_SPRETEiJ_G0017122	Cnot6	100	84.258	Mus_spretus
ENSMZEG00005012899	cnot6b	100	86.404	ENSMPUG00000000587	CNOT6	96	85.510	Mustela_putorius_furo
ENSMZEG00005012899	cnot6b	100	84.574	ENSMLUG00000010257	CNOT6	100	83.688	Myotis_lucifugus
ENSMZEG00005012899	cnot6b	100	84.258	ENSNGAG00000008269	Cnot6	100	83.721	Nannospalax_galili
ENSMZEG00005012899	cnot6b	100	99.821	ENSNBRG00000010798	cnot6b	100	99.821	Neolamprologus_brichardi
ENSMZEG00005012899	cnot6b	100	84.794	ENSNLEG00000002322	CNOT6	100	83.900	Nomascus_leucogenys
ENSMZEG00005012899	cnot6b	81	82.870	ENSMEUG00000000025	CNOT6	81	81.481	Notamacropus_eugenii
ENSMZEG00005012899	cnot6b	88	85.714	ENSOPRG00000008244	-	88	85.714	Ochotona_princeps
ENSMZEG00005012899	cnot6b	100	83.900	ENSODEG00000007041	CNOT6	100	83.005	Octodon_degus
ENSMZEG00005012899	cnot6b	75	98.345	ENSONIG00000013027	cnot6b	99	98.345	Oreochromis_niloticus
ENSMZEG00005012899	cnot6b	100	85.510	ENSOANG00000010226	CNOT6	100	84.615	Ornithorhynchus_anatinus
ENSMZEG00005012899	cnot6b	100	84.670	ENSOCUG00000011083	CNOT6	100	83.779	Oryctolagus_cuniculus
ENSMZEG00005012899	cnot6b	100	96.243	ENSORLG00000005059	cnot6b	100	96.243	Oryzias_latipes
ENSMZEG00005012899	cnot6b	100	96.243	ENSORLG00020012784	cnot6b	100	96.243	Oryzias_latipes_hni
ENSMZEG00005012899	cnot6b	94	95.793	ENSORLG00015022658	cnot6b	98	95.793	Oryzias_latipes_hsok
ENSMZEG00005012899	cnot6b	100	96.780	ENSOMEG00000005295	cnot6b	100	96.780	Oryzias_melastigma
ENSMZEG00005012899	cnot6b	94	84.791	ENSOGAG00000032470	CNOT6	100	83.840	Otolemur_garnettii
ENSMZEG00005012899	cnot6b	97	85.110	ENSOARG00000001003	CNOT6	100	84.191	Ovis_aries
ENSMZEG00005012899	cnot6b	100	85.689	ENSPPAG00000032253	CNOT6	100	84.794	Pan_paniscus
ENSMZEG00005012899	cnot6b	100	86.047	ENSPPRG00000011912	CNOT6	100	85.152	Panthera_pardus
ENSMZEG00005012899	cnot6b	100	86.047	ENSPTIG00000016794	CNOT6	100	85.152	Panthera_tigris_altaica
ENSMZEG00005012899	cnot6b	100	85.689	ENSPTRG00000017636	CNOT6	100	84.794	Pan_troglodytes
ENSMZEG00005012899	cnot6b	100	85.689	ENSPANG00000016191	CNOT6	100	84.794	Papio_anubis
ENSMZEG00005012899	cnot6b	100	89.982	ENSPKIG00000021368	cnot6b	100	89.267	Paramormyrops_kingsleyae
ENSMZEG00005012899	cnot6b	98	86.264	ENSPSIG00000017307	CNOT6	100	85.714	Pelodiscus_sinensis
ENSMZEG00005012899	cnot6b	100	94.812	ENSPMGG00000011238	cnot6b	100	94.812	Periophthalmus_magnuspinnatus
ENSMZEG00005012899	cnot6b	100	84.258	ENSPEMG00000000627	Cnot6	100	83.721	Peromyscus_maniculatus_bairdii
ENSMZEG00005012899	cnot6b	100	86.047	ENSPCIG00000020319	CNOT6	99	85.510	Phascolarctos_cinereus
ENSMZEG00005012899	cnot6b	100	94.812	ENSPFOG00000006291	cnot6b	100	94.812	Poecilia_formosa
ENSMZEG00005012899	cnot6b	100	91.592	ENSPLAG00000008266	cnot6b	100	91.592	Poecilia_latipinna
ENSMZEG00005012899	cnot6b	100	94.991	ENSPMEG00000009091	cnot6b	100	94.991	Poecilia_mexicana
ENSMZEG00005012899	cnot6b	100	93.560	ENSPREG00000003713	cnot6b	100	93.560	Poecilia_reticulata
ENSMZEG00005012899	cnot6b	100	85.689	ENSPPYG00000016137	CNOT6	100	84.794	Pongo_abelii
ENSMZEG00005012899	cnot6b	71	84.328	ENSPCAG00000005599	-	71	82.463	Procavia_capensis
ENSMZEG00005012899	cnot6b	100	79.964	ENSPCOG00000017359	CNOT6	100	79.785	Propithecus_coquereli
ENSMZEG00005012899	cnot6b	100	82.648	ENSPVAG00000003069	CNOT6	100	81.753	Pteropus_vampyrus
ENSMZEG00005012899	cnot6b	100	99.821	ENSPNYG00000000321	cnot6b	100	99.821	Pundamilia_nyererei
ENSMZEG00005012899	cnot6b	100	89.803	ENSPNAG00000028816	cnot6b	100	88.909	Pygocentrus_nattereri
ENSMZEG00005012899	cnot6b	100	90.340	ENSPNAG00000029586	cnot6a	100	90.161	Pygocentrus_nattereri
ENSMZEG00005012899	cnot6b	100	84.436	ENSRNOG00000054891	Cnot6	100	83.542	Rattus_norvegicus
ENSMZEG00005012899	cnot6b	100	85.510	ENSRBIG00000004309	CNOT6	100	84.615	Rhinopithecus_bieti
ENSMZEG00005012899	cnot6b	100	85.510	ENSRROG00000035378	CNOT6	100	84.615	Rhinopithecus_roxellana
ENSMZEG00005012899	cnot6b	100	85.868	ENSSBOG00000030494	CNOT6	100	85.152	Saimiri_boliviensis_boliviensis
ENSMZEG00005012899	cnot6b	100	86.047	ENSSHAG00000017436	CNOT6	100	85.510	Sarcophilus_harrisii
ENSMZEG00005012899	cnot6b	100	90.161	ENSSFOG00015022383	cnot6a	96	89.267	Scleropages_formosus
ENSMZEG00005012899	cnot6b	100	92.487	ENSSFOG00015015133	CNOT6	100	91.950	Scleropages_formosus
ENSMZEG00005012899	cnot6b	100	95.886	ENSSMAG00000003084	cnot6b	100	95.886	Scophthalmus_maximus
ENSMZEG00005012899	cnot6b	100	96.780	ENSSDUG00000004151	cnot6b	100	96.780	Seriola_dumerili
ENSMZEG00005012899	cnot6b	100	96.959	ENSSLDG00000004448	cnot6b	100	96.959	Seriola_lalandi_dorsalis
ENSMZEG00005012899	cnot6b	64	67.409	ENSSARG00000012650	-	100	67.409	Sorex_araneus
ENSMZEG00005012899	cnot6b	100	86.404	ENSSPUG00000007893	CNOT6	100	85.868	Sphenodon_punctatus
ENSMZEG00005012899	cnot6b	100	97.138	ENSSPAG00000000149	cnot6b	100	97.138	Stegastes_partitus
ENSMZEG00005012899	cnot6b	100	85.868	ENSSSCG00000014009	CNOT6	100	84.973	Sus_scrofa
ENSMZEG00005012899	cnot6b	100	86.047	ENSTGUG00000001119	CNOT6	100	85.510	Taeniopygia_guttata
ENSMZEG00005012899	cnot6b	100	91.234	ENSTRUG00000002818	cnot6b	100	90.698	Takifugu_rubripes
ENSMZEG00005012899	cnot6b	100	92.308	ENSTNIG00000004443	cnot6b	99	91.771	Tetraodon_nigroviridis
ENSMZEG00005012899	cnot6b	76	76.119	ENSTBEG00000017094	-	87	76.119	Tupaia_belangeri
ENSMZEG00005012899	cnot6b	100	85.689	ENSTTRG00000009363	CNOT6	100	84.794	Tursiops_truncatus
ENSMZEG00005012899	cnot6b	90	75.198	ENSUAMG00000004579	CNOT6	99	74.206	Ursus_americanus
ENSMZEG00005012899	cnot6b	100	82.082	ENSUMAG00000024577	CNOT6	100	81.229	Ursus_maritimus
ENSMZEG00005012899	cnot6b	84	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSMZEG00005012899	cnot6b	100	86.047	ENSVVUG00000026940	CNOT6	100	85.152	Vulpes_vulpes
ENSMZEG00005012899	cnot6b	100	91.950	ENSXCOG00000003360	cnot6b	100	91.950	Xiphophorus_couchianus
ENSMZEG00005012899	cnot6b	100	94.991	ENSXMAG00000008730	cnot6b	100	94.991	Xiphophorus_maculatus