EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005013006 (Gene tree)
Gene ID: 101483155
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 6874 bases
Position: chrLG15:20739572-20746445
Accession: 101483155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005017329	RNase_H	PF00075.24	1.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005017876	-	2033	-	ENSMZEP00005017329	309 (aa)	-	UPI000329839C

Gene Model

Click here to download ENSMZEG00005013006's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005013006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005013006	rnaseh1	87	55.185	ENSG00000171865	RNASEH1	89	54.815	Homo_sapiens
ENSMZEG00005013006	rnaseh1	99	80.392	ENSAPOG00000000412	rnaseh1	100	80.392	Acanthochromis_polyacanthus
ENSMZEG00005013006	rnaseh1	87	53.704	ENSAMEG00000018433	RNASEH1	98	50.842	Ailuropoda_melanoleuca
ENSMZEG00005013006	rnaseh1	99	88.961	ENSACIG00000014666	rnaseh1	99	88.961	Amphilophus_citrinellus
ENSMZEG00005013006	rnaseh1	98	83.168	ENSAOCG00000015210	rnaseh1	99	82.838	Amphiprion_ocellaris
ENSMZEG00005013006	rnaseh1	98	83.168	ENSAPEG00000014104	rnaseh1	99	82.838	Amphiprion_percula
ENSMZEG00005013006	rnaseh1	99	82.410	ENSATEG00000000598	rnaseh1	99	81.818	Anabas_testudineus
ENSMZEG00005013006	rnaseh1	83	52.091	ENSAPLG00000001961	RNASEH1	100	52.091	Anas_platyrhynchos
ENSMZEG00005013006	rnaseh1	87	49.833	ENSACAG00000016857	rnaseh1	91	47.841	Anolis_carolinensis
ENSMZEG00005013006	rnaseh1	87	55.185	ENSANAG00000024055	RNASEH1	89	55.224	Aotus_nancymaae
ENSMZEG00005013006	rnaseh1	100	100.000	ENSACLG00000006741	rnaseh1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005013006	rnaseh1	95	53.378	ENSAMXG00000042940	rnaseh1	97	57.040	Astyanax_mexicanus
ENSMZEG00005013006	rnaseh1	96	52.475	ENSBTAG00000016235	RNASEH1	99	52.145	Bos_taurus
ENSMZEG00005013006	rnaseh1	88	36.264	WBGene00004382	rnh-1.0	97	36.264	Caenorhabditis_elegans
ENSMZEG00005013006	rnaseh1	87	52.899	ENSCJAG00000035450	RNASEH1	89	52.920	Callithrix_jacchus
ENSMZEG00005013006	rnaseh1	94	51.827	ENSCAFG00000003259	RNASEH1	98	51.000	Canis_familiaris
ENSMZEG00005013006	rnaseh1	96	53.512	ENSCHIG00000022264	-	99	52.843	Capra_hircus
ENSMZEG00005013006	rnaseh1	81	45.020	ENSCHIG00000022230	-	99	44.223	Capra_hircus
ENSMZEG00005013006	rnaseh1	88	53.285	ENSTSYG00000012926	RNASEH1	89	52.768	Carlito_syrichta
ENSMZEG00005013006	rnaseh1	82	55.512	ENSCAPG00000004813	RNASEH1	99	53.937	Cavia_aperea
ENSMZEG00005013006	rnaseh1	88	55.720	ENSCPOG00000022278	Rnaseh1	87	54.244	Cavia_porcellus
ENSMZEG00005013006	rnaseh1	87	54.745	ENSCCAG00000038017	RNASEH1	89	54.745	Cebus_capucinus
ENSMZEG00005013006	rnaseh1	87	54.074	ENSCATG00000016515	-	89	53.704	Cercocebus_atys
ENSMZEG00005013006	rnaseh1	87	49.254	ENSCATG00000016818	-	89	48.708	Cercocebus_atys
ENSMZEG00005013006	rnaseh1	87	55.970	ENSCLAG00000002440	RNASEH1	89	55.597	Chinchilla_lanigera
ENSMZEG00005013006	rnaseh1	87	54.444	ENSCSAG00000006943	RNASEH1	89	53.704	Chlorocebus_sabaeus
ENSMZEG00005013006	rnaseh1	54	62.353	ENSCHOG00000008547	RNASEH1	74	67.550	Choloepus_hoffmanni
ENSMZEG00005013006	rnaseh1	90	53.521	ENSCPBG00000021620	RNASEH1	99	54.710	Chrysemys_picta_bellii
ENSMZEG00005013006	rnaseh1	88	37.050	ENSCING00000014054	-	93	37.050	Ciona_intestinalis
ENSMZEG00005013006	rnaseh1	74	37.607	ENSCSAVG00000000009	-	96	36.820	Ciona_savignyi
ENSMZEG00005013006	rnaseh1	87	55.185	ENSCANG00000037763	RNASEH1	89	55.185	Colobus_angolensis_palliatus
ENSMZEG00005013006	rnaseh1	87	54.244	ENSCGRG00001008950	Rnaseh1	89	54.478	Cricetulus_griseus_chok1gshd
ENSMZEG00005013006	rnaseh1	87	54.244	ENSCGRG00000006029	Rnaseh1	89	54.478	Cricetulus_griseus_crigri
ENSMZEG00005013006	rnaseh1	99	67.619	ENSCSEG00000005741	rnaseh1	97	68.254	Cynoglossus_semilaevis
ENSMZEG00005013006	rnaseh1	97	76.333	ENSCVAG00000018717	rnaseh1	98	75.667	Cyprinodon_variegatus
ENSMZEG00005013006	rnaseh1	89	66.787	ENSDARG00000042571	rnaseh1	98	66.426	Danio_rerio
ENSMZEG00005013006	rnaseh1	93	52.577	ENSDNOG00000016056	RNASEH1	94	53.103	Dasypus_novemcinctus
ENSMZEG00005013006	rnaseh1	87	54.244	ENSDORG00000000704	Rnaseh1	89	54.044	Dipodomys_ordii
ENSMZEG00005013006	rnaseh1	87	37.586	FBgn0023171	rnh1	92	37.586	Drosophila_melanogaster
ENSMZEG00005013006	rnaseh1	96	50.000	ENSETEG00000012674	RNASEH1	99	49.833	Echinops_telfairi
ENSMZEG00005013006	rnaseh1	87	45.556	ENSEBUG00000006116	rnaseh1	78	44.485	Eptatretus_burgeri
ENSMZEG00005013006	rnaseh1	88	45.270	ENSEBUG00000008898	rnaseh1	99	44.257	Eptatretus_burgeri
ENSMZEG00005013006	rnaseh1	95	54.545	ENSEASG00005022200	RNASEH1	97	52.862	Equus_asinus_asinus
ENSMZEG00005013006	rnaseh1	95	54.545	ENSECAG00000020695	RNASEH1	97	52.862	Equus_caballus
ENSMZEG00005013006	rnaseh1	96	70.234	ENSELUG00000010112	rnaseh1	99	69.565	Esox_lucius
ENSMZEG00005013006	rnaseh1	94	52.881	ENSFCAG00000025832	RNASEH1	98	52.542	Felis_catus
ENSMZEG00005013006	rnaseh1	88	56.890	ENSFALG00000002069	RNASEH1	93	56.890	Ficedula_albicollis
ENSMZEG00005013006	rnaseh1	87	54.244	ENSFDAG00000002035	RNASEH1	79	53.731	Fukomys_damarensis
ENSMZEG00005013006	rnaseh1	96	71.380	ENSGMOG00000013818	rnaseh1	99	70.707	Gadus_morhua
ENSMZEG00005013006	rnaseh1	88	55.147	ENSGALG00000016389	RNASEH1	93	55.147	Gallus_gallus
ENSMZEG00005013006	rnaseh1	96	72.333	ENSGAFG00000001776	rnaseh1	99	72.391	Gambusia_affinis
ENSMZEG00005013006	rnaseh1	96	81.208	ENSGACG00000011935	rnaseh1	98	80.537	Gasterosteus_aculeatus
ENSMZEG00005013006	rnaseh1	87	55.797	ENSGAGG00000009150	RNASEH1	61	55.435	Gopherus_agassizii
ENSMZEG00005013006	rnaseh1	87	55.224	ENSGGOG00000034822	RNASEH1	89	54.851	Gorilla_gorilla
ENSMZEG00005013006	rnaseh1	100	98.382	ENSHBUG00000004666	rnaseh1	100	98.382	Haplochromis_burtoni
ENSMZEG00005013006	rnaseh1	87	53.731	ENSHGLG00000002585	Rnaseh1	82	52.612	Heterocephalus_glaber_female
ENSMZEG00005013006	rnaseh1	87	53.731	ENSHGLG00100005105	Rnaseh1	82	52.612	Heterocephalus_glaber_male
ENSMZEG00005013006	rnaseh1	98	71.987	ENSHCOG00000012329	rnaseh1	100	71.336	Hippocampus_comes
ENSMZEG00005013006	rnaseh1	96	57.525	ENSIPUG00000023060	rnaseh1	98	59.636	Ictalurus_punctatus
ENSMZEG00005013006	rnaseh1	87	55.185	ENSSTOG00000012774	RNASEH1	91	55.185	Ictidomys_tridecemlineatus
ENSMZEG00005013006	rnaseh1	85	44.697	ENSJJAG00000008994	-	89	43.561	Jaculus_jaculus
ENSMZEG00005013006	rnaseh1	87	49.630	ENSJJAG00000021481	-	89	48.889	Jaculus_jaculus
ENSMZEG00005013006	rnaseh1	79	52.245	ENSJJAG00000020238	Rnaseh1	90	51.429	Jaculus_jaculus
ENSMZEG00005013006	rnaseh1	97	73.913	ENSKMAG00000001373	rnaseh1	98	73.913	Kryptolebias_marmoratus
ENSMZEG00005013006	rnaseh1	100	74.516	ENSLBEG00000004480	rnaseh1	97	78.623	Labrus_bergylta
ENSMZEG00005013006	rnaseh1	89	55.714	ENSLACG00000007100	RNASEH1	90	55.357	Latimeria_chalumnae
ENSMZEG00005013006	rnaseh1	90	61.566	ENSLOCG00000017212	rnaseh1	100	61.972	Lepisosteus_oculatus
ENSMZEG00005013006	rnaseh1	94	53.199	ENSLAFG00000015091	RNASEH1	98	51.515	Loxodonta_africana
ENSMZEG00005013006	rnaseh1	87	50.373	ENSMFAG00000002323	-	89	50.000	Macaca_fascicularis
ENSMZEG00005013006	rnaseh1	87	54.444	ENSMFAG00000000063	-	89	53.704	Macaca_fascicularis
ENSMZEG00005013006	rnaseh1	87	50.373	ENSMMUG00000019280	-	89	49.627	Macaca_mulatta
ENSMZEG00005013006	rnaseh1	87	50.000	ENSMNEG00000029676	-	89	49.627	Macaca_nemestrina
ENSMZEG00005013006	rnaseh1	87	54.815	ENSMNEG00000040183	-	89	54.074	Macaca_nemestrina
ENSMZEG00005013006	rnaseh1	87	51.493	ENSMLEG00000028662	-	89	51.119	Mandrillus_leucophaeus
ENSMZEG00005013006	rnaseh1	81	54.150	ENSMLEG00000039352	-	98	54.150	Mandrillus_leucophaeus
ENSMZEG00005013006	rnaseh1	99	78.827	ENSMAMG00000019725	rnaseh1	99	78.671	Mastacembelus_armatus
ENSMZEG00005013006	rnaseh1	78	55.556	ENSMGAG00000013979	RNASEH1	99	55.556	Meleagris_gallopavo
ENSMZEG00005013006	rnaseh1	87	54.212	ENSMAUG00000014957	Rnaseh1	89	54.244	Mesocricetus_auratus
ENSMZEG00005013006	rnaseh1	87	54.579	ENSMICG00000033156	RNASEH1	88	54.779	Microcebus_murinus
ENSMZEG00005013006	rnaseh1	87	54.122	ENSMOCG00000015522	Rnaseh1	89	54.212	Microtus_ochrogaster
ENSMZEG00005013006	rnaseh1	95	78.571	ENSMMOG00000015902	rnaseh1	96	78.231	Mola_mola
ENSMZEG00005013006	rnaseh1	87	54.815	ENSMODG00000014491	-	89	54.815	Monodelphis_domestica
ENSMZEG00005013006	rnaseh1	77	50.209	ENSMODG00000028814	-	91	51.250	Monodelphis_domestica
ENSMZEG00005013006	rnaseh1	97	80.132	ENSMALG00000010565	rnaseh1	99	79.470	Monopterus_albus
ENSMZEG00005013006	rnaseh1	87	55.224	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	54.851	Mus_caroli
ENSMZEG00005013006	rnaseh1	87	55.597	ENSMUSG00000020630	Rnaseh1	89	55.224	Mus_musculus
ENSMZEG00005013006	rnaseh1	87	54.851	MGP_PahariEiJ_G0029418	Rnaseh1	89	55.224	Mus_pahari
ENSMZEG00005013006	rnaseh1	87	55.597	MGP_SPRETEiJ_G0018502	Rnaseh1	89	54.851	Mus_spretus
ENSMZEG00005013006	rnaseh1	87	56.410	ENSNGAG00000015966	Rnaseh1	84	55.926	Nannospalax_galili
ENSMZEG00005013006	rnaseh1	100	98.382	ENSNBRG00000008739	rnaseh1	100	98.382	Neolamprologus_brichardi
ENSMZEG00005013006	rnaseh1	80	48.387	ENSNLEG00000000059	-	88	47.581	Nomascus_leucogenys
ENSMZEG00005013006	rnaseh1	87	49.259	ENSNLEG00000015400	RNASEH1	87	48.519	Nomascus_leucogenys
ENSMZEG00005013006	rnaseh1	96	35.452	ENSMEUG00000003610	-	99	34.680	Notamacropus_eugenii
ENSMZEG00005013006	rnaseh1	88	52.768	ENSOPRG00000005072	RNASEH1	90	52.347	Ochotona_princeps
ENSMZEG00005013006	rnaseh1	91	54.545	ENSODEG00000000235	Rnaseh1	92	53.846	Octodon_degus
ENSMZEG00005013006	rnaseh1	90	97.122	ENSONIG00000018697	rnaseh1	100	97.122	Oreochromis_niloticus
ENSMZEG00005013006	rnaseh1	94	51.351	ENSOCUG00000006117	RNASEH1	95	52.055	Oryctolagus_cuniculus
ENSMZEG00005013006	rnaseh1	92	75.088	ENSORLG00000018127	rnaseh1	97	75.180	Oryzias_latipes
ENSMZEG00005013006	rnaseh1	99	73.616	ENSORLG00020013660	rnaseh1	99	72.638	Oryzias_latipes_hni
ENSMZEG00005013006	rnaseh1	99	72.638	ENSORLG00015011338	rnaseh1	99	72.638	Oryzias_latipes_hsok
ENSMZEG00005013006	rnaseh1	88	71.691	ENSOMEG00000004710	rnaseh1	99	70.956	Oryzias_melastigma
ENSMZEG00005013006	rnaseh1	95	51.014	ENSOGAG00000017176	RNASEH1	98	51.014	Otolemur_garnettii
ENSMZEG00005013006	rnaseh1	96	46.906	ENSOARG00000005386	RNASEH1	99	46.580	Ovis_aries
ENSMZEG00005013006	rnaseh1	87	55.185	ENSPPAG00000034221	RNASEH1	89	54.815	Pan_paniscus
ENSMZEG00005013006	rnaseh1	94	52.542	ENSPPRG00000015513	RNASEH1	98	52.203	Panthera_pardus
ENSMZEG00005013006	rnaseh1	81	55.200	ENSPTIG00000019034	RNASEH1	83	54.800	Panthera_tigris_altaica
ENSMZEG00005013006	rnaseh1	88	45.520	ENSPTRG00000043403	-	97	46.237	Pan_troglodytes
ENSMZEG00005013006	rnaseh1	87	55.185	ENSPTRG00000011614	RNASEH1	89	54.815	Pan_troglodytes
ENSMZEG00005013006	rnaseh1	87	54.444	ENSPANG00000000443	RNASEH1	97	53.150	Papio_anubis
ENSMZEG00005013006	rnaseh1	87	49.627	ENSPANG00000018246	-	88	49.254	Papio_anubis
ENSMZEG00005013006	rnaseh1	89	60.142	ENSPKIG00000003146	rnaseh1	99	60.854	Paramormyrops_kingsleyae
ENSMZEG00005013006	rnaseh1	87	55.147	ENSPSIG00000002937	RNASEH1	99	54.412	Pelodiscus_sinensis
ENSMZEG00005013006	rnaseh1	96	61.538	ENSPMGG00000017463	rnaseh1	99	62.712	Periophthalmus_magnuspinnatus
ENSMZEG00005013006	rnaseh1	87	54.104	ENSPEMG00000022465	-	89	54.104	Peromyscus_maniculatus_bairdii
ENSMZEG00005013006	rnaseh1	52	38.037	ENSPCIG00000026047	-	87	37.013	Phascolarctos_cinereus
ENSMZEG00005013006	rnaseh1	96	51.178	ENSPCIG00000023334	-	98	51.178	Phascolarctos_cinereus
ENSMZEG00005013006	rnaseh1	97	73.000	ENSPFOG00000002841	rnaseh1	100	72.667	Poecilia_formosa
ENSMZEG00005013006	rnaseh1	72	58.150	ENSPLAG00000021349	-	85	57.709	Poecilia_latipinna
ENSMZEG00005013006	rnaseh1	97	73.000	ENSPMEG00000016826	rnaseh1	100	72.667	Poecilia_mexicana
ENSMZEG00005013006	rnaseh1	97	72.222	ENSPREG00000012197	rnaseh1	100	71.895	Poecilia_reticulata
ENSMZEG00005013006	rnaseh1	87	46.667	ENSPPYG00000025873	RNASEH1	88	46.296	Pongo_abelii
ENSMZEG00005013006	rnaseh1	80	50.000	ENSPPYG00000008067	-	90	50.000	Pongo_abelii
ENSMZEG00005013006	rnaseh1	88	53.875	ENSPCAG00000002500	RNASEH1	90	53.875	Procavia_capensis
ENSMZEG00005013006	rnaseh1	87	48.162	ENSPCOG00000019444	RNASEH1	89	48.162	Propithecus_coquereli
ENSMZEG00005013006	rnaseh1	96	48.505	ENSPVAG00000002070	RNASEH1	99	48.505	Pteropus_vampyrus
ENSMZEG00005013006	rnaseh1	100	99.029	ENSPNYG00000001292	rnaseh1	100	99.029	Pundamilia_nyererei
ENSMZEG00005013006	rnaseh1	96	63.787	ENSPNAG00000022344	rnaseh1	99	62.126	Pygocentrus_nattereri
ENSMZEG00005013006	rnaseh1	94	50.515	ENSRNOG00000008584	Rnaseh1	97	52.577	Rattus_norvegicus
ENSMZEG00005013006	rnaseh1	87	54.815	ENSRBIG00000034222	RNASEH1	88	54.074	Rhinopithecus_bieti
ENSMZEG00005013006	rnaseh1	87	54.815	ENSRROG00000041761	RNASEH1	88	54.074	Rhinopithecus_roxellana
ENSMZEG00005013006	rnaseh1	89	52.000	YMR234W	-	87	52.000	Saccharomyces_cerevisiae
ENSMZEG00005013006	rnaseh1	87	54.380	ENSSBOG00000025411	RNASEH1	89	54.380	Saimiri_boliviensis_boliviensis
ENSMZEG00005013006	rnaseh1	96	51.163	ENSSHAG00000013051	RNASEH1	97	50.671	Sarcophilus_harrisii
ENSMZEG00005013006	rnaseh1	96	59.355	ENSSFOG00015002709	rnaseh1	100	58.194	Scleropages_formosus
ENSMZEG00005013006	rnaseh1	99	77.346	ENSSMAG00000007586	rnaseh1	100	77.023	Scophthalmus_maximus
ENSMZEG00005013006	rnaseh1	98	80.592	ENSSDUG00000008217	rnaseh1	99	81.185	Seriola_dumerili
ENSMZEG00005013006	rnaseh1	88	77.122	ENSSLDG00000000442	rnaseh1	95	81.323	Seriola_lalandi_dorsalis
ENSMZEG00005013006	rnaseh1	88	55.245	ENSSPUG00000006644	RNASEH1	93	54.895	Sphenodon_punctatus
ENSMZEG00005013006	rnaseh1	99	82.085	ENSSPAG00000009353	rnaseh1	100	82.085	Stegastes_partitus
ENSMZEG00005013006	rnaseh1	88	54.015	ENSSSCG00000025305	RNASEH1	99	51.163	Sus_scrofa
ENSMZEG00005013006	rnaseh1	88	55.245	ENSTGUG00000012980	RNASEH1	93	56.028	Taeniopygia_guttata
ENSMZEG00005013006	rnaseh1	95	73.737	ENSTRUG00000015774	rnaseh1	97	75.269	Takifugu_rubripes
ENSMZEG00005013006	rnaseh1	89	78.700	ENSTNIG00000010715	rnaseh1	97	78.700	Tetraodon_nigroviridis
ENSMZEG00005013006	rnaseh1	96	49.000	ENSTTRG00000001615	RNASEH1	99	49.667	Tursiops_truncatus
ENSMZEG00005013006	rnaseh1	68	53.052	ENSUMAG00000003941	RNASEH1	65	53.052	Ursus_maritimus
ENSMZEG00005013006	rnaseh1	95	45.151	ENSVPAG00000011589	RNASEH1	99	45.151	Vicugna_pacos
ENSMZEG00005013006	rnaseh1	94	51.827	ENSVVUG00000008633	RNASEH1	88	51.342	Vulpes_vulpes
ENSMZEG00005013006	rnaseh1	66	52.532	ENSXETG00000030371	-	97	53.642	Xenopus_tropicalis
ENSMZEG00005013006	rnaseh1	96	51.485	ENSXETG00000001212	rnaseh1	99	53.642	Xenopus_tropicalis
ENSMZEG00005013006	rnaseh1	96	74.582	ENSXMAG00000002357	rnaseh1	99	74.247	Xiphophorus_maculatus