EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005013432 (Gene tree)
Gene ID: 101464093
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 7143 bases
Position: chrLG14:14305235-14312377
Accession: 101464093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005017852	SRP54	PF00448.22	9.6e-48	1	1
ENSMZEP00005017852	SRP54_N	PF02881.19	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005018436	-	3934	XM_004543931	ENSMZEP00005017852	647 (aa)	XP_004543988	UPI00032A2C14

Gene Model

Click here to download ENSMZEG00005013432's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005013432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005013432	srpra	100	67.481	ENSG00000182934	SRPRA	100	67.381	Homo_sapiens
ENSMZEG00005013432	srpra	100	89.846	ENSAPOG00000017588	srpra	100	90.000	Acanthochromis_polyacanthus
ENSMZEG00005013432	srpra	100	67.988	ENSAMEG00000000117	SRPRA	100	67.431	Ailuropoda_melanoleuca
ENSMZEG00005013432	srpra	100	88.717	ENSACIG00000021588	srpra	100	90.108	Amphilophus_citrinellus
ENSMZEG00005013432	srpra	100	90.154	ENSAOCG00000018884	srpra	100	90.308	Amphiprion_ocellaris
ENSMZEG00005013432	srpra	100	90.154	ENSAPEG00000022286	srpra	92	90.308	Amphiprion_percula
ENSMZEG00005013432	srpra	100	85.407	ENSATEG00000023578	srpra	94	96.353	Anabas_testudineus
ENSMZEG00005013432	srpra	94	71.359	ENSAPLG00000016079	SRPRA	99	71.108	Anas_platyrhynchos
ENSMZEG00005013432	srpra	100	70.015	ENSACAG00000000108	SRPRA	100	69.985	Anolis_carolinensis
ENSMZEG00005013432	srpra	100	67.481	ENSANAG00000020346	SRPRA	100	67.075	Aotus_nancymaae
ENSMZEG00005013432	srpra	100	100.000	ENSACLG00000000518	srpra	100	100.000	Astatotilapia_calliptera
ENSMZEG00005013432	srpra	100	73.725	ENSAMXG00000009975	srpra	100	73.611	Astyanax_mexicanus
ENSMZEG00005013432	srpra	100	67.530	ENSBTAG00000014105	SRPRA	100	67.275	Bos_taurus
ENSMZEG00005013432	srpra	99	49.848	WBGene00009521	F38A1.8	99	49.242	Caenorhabditis_elegans
ENSMZEG00005013432	srpra	100	67.431	ENSCJAG00000008752	SRPRA	100	67.025	Callithrix_jacchus
ENSMZEG00005013432	srpra	100	66.311	ENSCAFG00000010474	SRPRA	100	65.902	Canis_familiaris
ENSMZEG00005013432	srpra	100	68.140	ENSCAFG00020010608	SRPRA	100	67.584	Canis_lupus_dingo
ENSMZEG00005013432	srpra	100	68.445	ENSCHIG00000012423	SRPRA	100	67.123	Capra_hircus
ENSMZEG00005013432	srpra	87	83.188	ENSTSYG00000005187	SRPRA	93	85.030	Carlito_syrichta
ENSMZEG00005013432	srpra	95	64.090	ENSCAPG00000007098	SRPRA	91	88.722	Cavia_aperea
ENSMZEG00005013432	srpra	100	67.683	ENSCPOG00000014976	SRPRA	91	88.722	Cavia_porcellus
ENSMZEG00005013432	srpra	100	67.481	ENSCCAG00000025602	SRPRA	100	66.921	Cebus_capucinus
ENSMZEG00005013432	srpra	100	67.786	ENSCATG00000039354	SRPRA	100	67.381	Cercocebus_atys
ENSMZEG00005013432	srpra	100	67.988	ENSCLAG00000016839	SRPRA	100	67.584	Chinchilla_lanigera
ENSMZEG00005013432	srpra	100	67.634	ENSCSAG00000002271	SRPRA	100	67.228	Chlorocebus_sabaeus
ENSMZEG00005013432	srpra	54	87.245	ENSCHOG00000010015	-	73	87.245	Choloepus_hoffmanni
ENSMZEG00005013432	srpra	100	68.304	ENSCPBG00000011128	SRPRA	100	70.393	Chrysemys_picta_bellii
ENSMZEG00005013432	srpra	99	58.859	ENSCING00000008954	-	100	58.647	Ciona_intestinalis
ENSMZEG00005013432	srpra	99	59.817	ENSCSAVG00000005602	-	100	59.248	Ciona_savignyi
ENSMZEG00005013432	srpra	100	67.786	ENSCANG00000032337	SRPRA	100	67.381	Colobus_angolensis_palliatus
ENSMZEG00005013432	srpra	100	68.140	ENSCGRG00001017670	Srpr	100	66.871	Cricetulus_griseus_chok1gshd
ENSMZEG00005013432	srpra	100	68.140	ENSCGRG00000009892	Srpr	90	88.889	Cricetulus_griseus_crigri
ENSMZEG00005013432	srpra	100	84.227	ENSCSEG00000002374	srpra	100	83.920	Cynoglossus_semilaevis
ENSMZEG00005013432	srpra	100	84.227	ENSCVAG00000019881	srpra	100	84.533	Cyprinodon_variegatus
ENSMZEG00005013432	srpra	100	79.542	ENSDARG00000061124	srpra	100	78.387	Danio_rerio
ENSMZEG00005013432	srpra	100	67.421	ENSDNOG00000010821	SRPRA	100	66.165	Dasypus_novemcinctus
ENSMZEG00005013432	srpra	100	68.293	ENSDORG00000016719	Srpr	100	68.043	Dipodomys_ordii
ENSMZEG00005013432	srpra	99	51.692	FBgn0010391	Gtp-bp	100	52.074	Drosophila_melanogaster
ENSMZEG00005013432	srpra	100	67.273	ENSETEG00000013956	SRPRA	100	66.214	Echinops_telfairi
ENSMZEG00005013432	srpra	50	84.112	ENSEBUG00000002602	srpra	92	69.031	Eptatretus_burgeri
ENSMZEG00005013432	srpra	100	67.988	ENSEASG00005022980	SRPRA	100	67.075	Equus_asinus_asinus
ENSMZEG00005013432	srpra	100	67.988	ENSECAG00000014692	SRPRA	100	67.075	Equus_caballus
ENSMZEG00005013432	srpra	100	63.190	ENSEEUG00000007920	SRPRA	100	62.557	Erinaceus_europaeus
ENSMZEG00005013432	srpra	100	83.257	ENSELUG00000017643	srpra	100	84.793	Esox_lucius
ENSMZEG00005013432	srpra	80	61.698	ENSFCAG00000030894	-	99	60.606	Felis_catus
ENSMZEG00005013432	srpra	100	67.884	ENSFCAG00000011274	-	100	66.768	Felis_catus
ENSMZEG00005013432	srpra	99	70.046	ENSFALG00000005048	SRPRA	99	68.997	Ficedula_albicollis
ENSMZEG00005013432	srpra	100	67.835	ENSFDAG00000016229	SRPRA	92	83.916	Fukomys_damarensis
ENSMZEG00005013432	srpra	100	86.943	ENSFHEG00000016959	srpra	100	87.250	Fundulus_heteroclitus
ENSMZEG00005013432	srpra	100	80.982	ENSGMOG00000013244	srpra	100	81.442	Gadus_morhua
ENSMZEG00005013432	srpra	100	70.588	ENSGALG00000030759	SRPRA	100	71.084	Gallus_gallus
ENSMZEG00005013432	srpra	100	87.017	ENSGAFG00000000453	srpra	100	87.017	Gambusia_affinis
ENSMZEG00005013432	srpra	100	83.308	ENSGACG00000006550	srpra	100	82.435	Gasterosteus_aculeatus
ENSMZEG00005013432	srpra	100	70.197	ENSGAGG00000021157	SRPRA	100	70.544	Gopherus_agassizii
ENSMZEG00005013432	srpra	100	67.481	ENSGGOG00000012962	SRPRA	100	67.381	Gorilla_gorilla
ENSMZEG00005013432	srpra	100	99.845	ENSHBUG00000000119	srpra	100	99.845	Haplochromis_burtoni
ENSMZEG00005013432	srpra	100	67.021	ENSHGLG00000001597	SRPR	94	89.394	Heterocephalus_glaber_female
ENSMZEG00005013432	srpra	100	67.021	ENSHGLG00100006449	SRPR	94	89.394	Heterocephalus_glaber_male
ENSMZEG00005013432	srpra	100	83.920	ENSHCOG00000010749	srpra	100	84.227	Hippocampus_comes
ENSMZEG00005013432	srpra	94	75.530	ENSIPUG00000000867	srpra	99	75.041	Ictalurus_punctatus
ENSMZEG00005013432	srpra	100	67.683	ENSSTOG00000009897	SRPRA	100	67.431	Ictidomys_tridecemlineatus
ENSMZEG00005013432	srpra	100	67.841	ENSJJAG00000020272	Srpr	100	67.737	Jaculus_jaculus
ENSMZEG00005013432	srpra	100	85.736	ENSKMAG00000002280	srpra	100	86.963	Kryptolebias_marmoratus
ENSMZEG00005013432	srpra	100	87.404	ENSLBEG00000009608	srpra	100	87.711	Labrus_bergylta
ENSMZEG00005013432	srpra	100	71.125	ENSLACG00000017781	SRPRA	100	72.534	Latimeria_chalumnae
ENSMZEG00005013432	srpra	100	76.524	ENSLOCG00000002733	srpra	100	76.372	Lepisosteus_oculatus
ENSMZEG00005013432	srpra	100	67.584	ENSLAFG00000010252	SRPRA	100	67.021	Loxodonta_africana
ENSMZEG00005013432	srpra	100	67.786	ENSMFAG00000032606	SRPRA	100	67.381	Macaca_fascicularis
ENSMZEG00005013432	srpra	100	67.786	ENSMMUG00000007938	SRPRA	100	67.381	Macaca_mulatta
ENSMZEG00005013432	srpra	100	68.140	ENSMNEG00000030709	SRPRA	100	67.737	Macaca_nemestrina
ENSMZEG00005013432	srpra	100	67.786	ENSMLEG00000043404	SRPRA	100	67.381	Mandrillus_leucophaeus
ENSMZEG00005013432	srpra	100	86.462	ENSMAMG00000000473	srpra	100	86.769	Mastacembelus_armatus
ENSMZEG00005013432	srpra	94	69.404	ENSMGAG00000000732	SRPRA	100	70.579	Meleagris_gallopavo
ENSMZEG00005013432	srpra	100	67.988	ENSMAUG00000015648	Srpr	100	67.431	Mesocricetus_auratus
ENSMZEG00005013432	srpra	100	67.835	ENSMICG00000015981	SRPRA	100	67.223	Microcebus_murinus
ENSMZEG00005013432	srpra	100	67.835	ENSMOCG00000008311	Srpr	100	66.564	Microtus_ochrogaster
ENSMZEG00005013432	srpra	100	78.923	ENSMMOG00000005019	srpra	100	76.347	Mola_mola
ENSMZEG00005013432	srpra	100	67.431	ENSMODG00000004576	-	100	66.972	Monodelphis_domestica
ENSMZEG00005013432	srpra	100	88.154	ENSMALG00000011343	srpra	100	88.154	Monopterus_albus
ENSMZEG00005013432	srpra	100	68.293	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSMZEG00005013432	srpra	100	67.835	ENSMUSG00000032042	Srpr	86	89.394	Mus_musculus
ENSMZEG00005013432	srpra	100	67.835	MGP_PahariEiJ_G0014816	Srpr	86	89.394	Mus_pahari
ENSMZEG00005013432	srpra	100	64.680	MGP_SPRETEiJ_G0033075	Srpr	100	63.464	Mus_spretus
ENSMZEG00005013432	srpra	100	67.884	ENSMPUG00000006626	SRPRA	100	67.737	Mustela_putorius_furo
ENSMZEG00005013432	srpra	100	66.817	ENSMLUG00000017334	SRPRA	100	67.278	Myotis_lucifugus
ENSMZEG00005013432	srpra	100	67.530	ENSNGAG00000015686	Srpr	100	66.667	Nannospalax_galili
ENSMZEG00005013432	srpra	100	98.918	ENSNBRG00000017311	srpra	100	98.918	Neolamprologus_brichardi
ENSMZEG00005013432	srpra	99	64.571	ENSNLEG00000007467	SRPRA	100	66.934	Nomascus_leucogenys
ENSMZEG00005013432	srpra	94	66.452	ENSMEUG00000004956	SRPRA	100	65.806	Notamacropus_eugenii
ENSMZEG00005013432	srpra	100	63.902	ENSOPRG00000013160	SRPRA	100	63.497	Ochotona_princeps
ENSMZEG00005013432	srpra	100	67.123	ENSODEG00000004730	SRPRA	100	66.819	Octodon_degus
ENSMZEG00005013432	srpra	100	98.764	ENSONIG00000005324	srpra	100	98.764	Oreochromis_niloticus
ENSMZEG00005013432	srpra	100	67.737	ENSOCUG00000017057	SRPRA	100	67.331	Oryctolagus_cuniculus
ENSMZEG00005013432	srpra	100	83.692	ENSORLG00000014676	srpra	95	96.061	Oryzias_latipes
ENSMZEG00005013432	srpra	100	83.846	ENSORLG00020009240	srpra	100	84.000	Oryzias_latipes_hni
ENSMZEG00005013432	srpra	100	83.538	ENSORLG00015015405	srpra	100	83.692	Oryzias_latipes_hsok
ENSMZEG00005013432	srpra	100	84.308	ENSOMEG00000005872	srpra	100	84.462	Oryzias_melastigma
ENSMZEG00005013432	srpra	100	68.037	ENSOGAG00000008926	SRPRA	100	67.786	Otolemur_garnettii
ENSMZEG00005013432	srpra	100	65.091	ENSOARG00000012397	SRPRA	100	64.992	Ovis_aries
ENSMZEG00005013432	srpra	100	67.481	ENSPPAG00000030813	SRPRA	100	67.381	Pan_paniscus
ENSMZEG00005013432	srpra	100	67.884	ENSPPRG00000001542	SRPRA	100	66.768	Panthera_pardus
ENSMZEG00005013432	srpra	100	67.732	ENSPTIG00000006989	SRPRA	100	66.616	Panthera_tigris_altaica
ENSMZEG00005013432	srpra	100	67.481	ENSPTRG00000028360	SRPRA	100	67.381	Pan_troglodytes
ENSMZEG00005013432	srpra	100	67.786	ENSPANG00000010858	SRPRA	100	67.381	Papio_anubis
ENSMZEG00005013432	srpra	100	76.480	ENSPKIG00000016106	srpra	100	76.783	Paramormyrops_kingsleyae
ENSMZEG00005013432	srpra	94	70.921	ENSPSIG00000012009	SRPRA	100	70.484	Pelodiscus_sinensis
ENSMZEG00005013432	srpra	100	81.664	ENSPMGG00000001393	srpra	100	82.280	Periophthalmus_magnuspinnatus
ENSMZEG00005013432	srpra	100	67.988	ENSPEMG00000018279	Srpr	100	66.718	Peromyscus_maniculatus_bairdii
ENSMZEG00005013432	srpra	99	63.247	ENSPMAG00000009559	srpra	99	61.760	Petromyzon_marinus
ENSMZEG00005013432	srpra	100	65.865	ENSPCIG00000010207	SRPRA	100	67.176	Phascolarctos_cinereus
ENSMZEG00005013432	srpra	100	87.385	ENSPFOG00000003114	srpra	100	87.538	Poecilia_formosa
ENSMZEG00005013432	srpra	100	87.077	ENSPLAG00000007323	srpra	100	87.231	Poecilia_latipinna
ENSMZEG00005013432	srpra	100	87.231	ENSPMEG00000015658	srpra	100	87.385	Poecilia_mexicana
ENSMZEG00005013432	srpra	100	87.077	ENSPREG00000004937	srpra	100	87.231	Poecilia_reticulata
ENSMZEG00005013432	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSMZEG00005013432	srpra	62	90.698	ENSPCAG00000003801	-	63	90.698	Procavia_capensis
ENSMZEG00005013432	srpra	100	67.835	ENSPCOG00000025726	SRPRA	100	67.275	Propithecus_coquereli
ENSMZEG00005013432	srpra	100	67.477	ENSPVAG00000000993	SRPRA	100	67.023	Pteropus_vampyrus
ENSMZEG00005013432	srpra	100	100.000	ENSPNYG00000012371	srpra	100	100.000	Pundamilia_nyererei
ENSMZEG00005013432	srpra	100	79.570	ENSPNAG00000013476	srpra	100	79.294	Pygocentrus_nattereri
ENSMZEG00005013432	srpra	100	67.835	ENSRNOG00000010543	Srpra	100	66.718	Rattus_norvegicus
ENSMZEG00005013432	srpra	100	67.634	ENSRBIG00000008702	SRPRA	100	67.381	Rhinopithecus_bieti
ENSMZEG00005013432	srpra	100	67.791	ENSRROG00000029494	SRPRA	100	67.381	Rhinopithecus_roxellana
ENSMZEG00005013432	srpra	100	67.328	ENSSBOG00000035892	SRPRA	100	66.922	Saimiri_boliviensis_boliviensis
ENSMZEG00005013432	srpra	94	65.865	ENSSHAG00000009168	SRPRA	100	66.559	Sarcophilus_harrisii
ENSMZEG00005013432	srpra	100	73.148	ENSSFOG00015008837	srpra	100	72.965	Scleropages_formosus
ENSMZEG00005013432	srpra	100	74.652	ENSSMAG00000002783	srpra	100	74.615	Scophthalmus_maximus
ENSMZEG00005013432	srpra	100	87.404	ENSSDUG00000013920	srpra	92	87.711	Seriola_dumerili
ENSMZEG00005013432	srpra	100	87.097	ENSSLDG00000008601	srpra	93	87.404	Seriola_lalandi_dorsalis
ENSMZEG00005013432	srpra	81	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSMZEG00005013432	srpra	100	69.618	ENSSPUG00000018221	SRPRA	100	70.183	Sphenodon_punctatus
ENSMZEG00005013432	srpra	100	90.184	ENSSPAG00000005103	srpra	100	90.337	Stegastes_partitus
ENSMZEG00005013432	srpra	100	67.786	ENSSSCG00000015227	SRPRA	100	67.381	Sus_scrofa
ENSMZEG00005013432	srpra	94	71.057	ENSTGUG00000000815	SRPRA	100	70.032	Taeniopygia_guttata
ENSMZEG00005013432	srpra	100	84.308	ENSTRUG00000006856	srpra	100	84.154	Takifugu_rubripes
ENSMZEG00005013432	srpra	100	78.431	ENSTNIG00000010316	srpra	100	78.431	Tetraodon_nigroviridis
ENSMZEG00005013432	srpra	100	68.196	ENSTTRG00000001558	SRPRA	100	67.278	Tursiops_truncatus
ENSMZEG00005013432	srpra	100	67.994	ENSUAMG00000005510	SRPRA	100	66.867	Ursus_americanus
ENSMZEG00005013432	srpra	96	61.867	ENSUMAG00000002269	SRPRA	100	61.033	Ursus_maritimus
ENSMZEG00005013432	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSMZEG00005013432	srpra	100	68.140	ENSVVUG00000020094	SRPRA	100	67.584	Vulpes_vulpes
ENSMZEG00005013432	srpra	100	62.689	ENSXETG00000003920	srpra	100	62.085	Xenopus_tropicalis
ENSMZEG00005013432	srpra	92	87.805	ENSXCOG00000001286	srpra	100	95.495	Xiphophorus_couchianus
ENSMZEG00005013432	srpra	100	86.862	ENSXMAG00000028401	srpra	100	86.862	Xiphophorus_maculatus