EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005013450 (Gene tree)
Gene ID: 101471782
Gene Symbol: trip4
Alias: im:7143009|si:busm1-221i3.1|si:dkey-173l11.4|zgc:153348
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 87390 bases
Position: chrLG1:28864471-28951860
Accession: 101471782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005017921	ASCH	PF04266.14	6.9e-21	1	1
ENSMZEP00005017897	ASCH	PF04266.14	7.4e-21	1	1
ENSMZEP00005017910	ASCH	PF04266.14	2.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005018505	-	1710	-	ENSMZEP00005017921	569 (aa)	-	-
ENSMZET00005018481	-	2131	XM_004557974	ENSMZEP00005017897	573 (aa)	XP_004558031	UPI000329FE3F
ENSMZET00005018494	-	2028	XM_004557975	ENSMZEP00005017910	566 (aa)	XP_004558032	UPI000329ECA9

Gene Model

Click here to download ENSMZEG00005013450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005013450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005013450	trip4	99	61.391	ENSG00000103671	TRIP4	98	60.794	Homo_sapiens
ENSMZEG00005013450	trip4	80	82.477	ENSAPOG00000023326	trip4	99	67.611	Acanthochromis_polyacanthus
ENSMZEG00005013450	trip4	99	60.938	ENSAMEG00000002591	TRIP4	98	60.276	Ailuropoda_melanoleuca
ENSMZEG00005013450	trip4	96	83.333	ENSACIG00000010577	trip4	98	83.978	Amphilophus_citrinellus
ENSMZEG00005013450	trip4	92	85.135	ENSAOCG00000000395	trip4	91	84.971	Amphiprion_ocellaris
ENSMZEG00005013450	trip4	100	86.911	ENSAPEG00000003621	trip4	100	86.911	Amphiprion_percula
ENSMZEG00005013450	trip4	100	86.562	ENSATEG00000019577	trip4	100	86.736	Anabas_testudineus
ENSMZEG00005013450	trip4	98	61.485	ENSAPLG00000004612	TRIP4	99	62.264	Anas_platyrhynchos
ENSMZEG00005013450	trip4	99	61.379	ENSACAG00000007077	TRIP4	89	61.379	Anolis_carolinensis
ENSMZEG00005013450	trip4	99	60.870	ENSANAG00000027612	TRIP4	98	60.104	Aotus_nancymaae
ENSMZEG00005013450	trip4	100	100.000	ENSACLG00000013819	trip4	100	100.000	Astatotilapia_calliptera
ENSMZEG00005013450	trip4	99	73.647	ENSAMXG00000007270	trip4	100	73.647	Astyanax_mexicanus
ENSMZEG00005013450	trip4	99	60.696	ENSBTAG00000014493	TRIP4	97	60.696	Bos_taurus
ENSMZEG00005013450	trip4	99	60.348	ENSCJAG00000005107	TRIP4	98	59.758	Callithrix_jacchus
ENSMZEG00005013450	trip4	99	60.764	ENSCAFG00000017091	TRIP4	98	60.104	Canis_familiaris
ENSMZEG00005013450	trip4	99	60.764	ENSCAFG00020008960	TRIP4	98	60.104	Canis_lupus_dingo
ENSMZEG00005013450	trip4	96	59.325	ENSCHIG00000023818	TRIP4	97	59.893	Capra_hircus
ENSMZEG00005013450	trip4	98	60.453	ENSTSYG00000007185	TRIP4	98	59.965	Carlito_syrichta
ENSMZEG00005013450	trip4	66	68.421	ENSCAPG00000017624	TRIP4	82	68.421	Cavia_aperea
ENSMZEG00005013450	trip4	99	60.453	ENSCPOG00000006483	TRIP4	98	59.930	Cavia_porcellus
ENSMZEG00005013450	trip4	99	58.014	ENSCCAG00000026483	TRIP4	98	57.895	Cebus_capucinus
ENSMZEG00005013450	trip4	99	60.445	ENSCATG00000041144	TRIP4	98	60.794	Cercocebus_atys
ENSMZEG00005013450	trip4	99	61.285	ENSCLAG00000006872	TRIP4	98	60.794	Chinchilla_lanigera
ENSMZEG00005013450	trip4	99	60.445	ENSCSAG00000012499	TRIP4	98	60.794	Chlorocebus_sabaeus
ENSMZEG00005013450	trip4	78	54.989	ENSCHOG00000010776	TRIP4	76	56.629	Choloepus_hoffmanni
ENSMZEG00005013450	trip4	96	61.879	ENSCPBG00000006093	TRIP4	97	62.143	Chrysemys_picta_bellii
ENSMZEG00005013450	trip4	98	44.370	ENSCSAVG00000005293	-	98	44.370	Ciona_savignyi
ENSMZEG00005013450	trip4	99	59.051	ENSCANG00000033593	TRIP4	98	58.290	Colobus_angolensis_palliatus
ENSMZEG00005013450	trip4	99	60.348	ENSCGRG00001021158	Trip4	97	60.348	Cricetulus_griseus_chok1gshd
ENSMZEG00005013450	trip4	99	50.609	ENSCGRG00000002340	Trip4	98	59.636	Cricetulus_griseus_crigri
ENSMZEG00005013450	trip4	100	78.397	ENSCSEG00000009015	trip4	99	78.571	Cynoglossus_semilaevis
ENSMZEG00005013450	trip4	98	75.936	ENSCVAG00000021094	-	96	75.936	Cyprinodon_variegatus
ENSMZEG00005013450	trip4	92	83.591	ENSCVAG00000020984	trip4	99	83.430	Cyprinodon_variegatus
ENSMZEG00005013450	trip4	99	72.329	ENSDARG00000098074	trip4	100	72.329	Danio_rerio
ENSMZEG00005013450	trip4	99	61.644	ENSDNOG00000008654	TRIP4	98	61.831	Dasypus_novemcinctus
ENSMZEG00005013450	trip4	99	60.870	ENSDORG00000014914	Trip4	98	59.758	Dipodomys_ordii
ENSMZEG00005013450	trip4	91	38.889	FBgn0031115	CG11710	92	38.889	Drosophila_melanogaster
ENSMZEG00005013450	trip4	98	61.043	ENSETEG00000001597	TRIP4	98	60.104	Echinops_telfairi
ENSMZEG00005013450	trip4	99	46.957	ENSEBUG00000009039	trip4	99	47.993	Eptatretus_burgeri
ENSMZEG00005013450	trip4	99	61.111	ENSEASG00005006538	TRIP4	98	60.276	Equus_asinus_asinus
ENSMZEG00005013450	trip4	91	59.696	ENSECAG00000024689	TRIP4	95	60.229	Equus_caballus
ENSMZEG00005013450	trip4	79	65.775	ENSEEUG00000007741	TRIP4	78	65.775	Erinaceus_europaeus
ENSMZEG00005013450	trip4	99	72.855	ENSELUG00000022449	trip4	99	72.855	Esox_lucius
ENSMZEG00005013450	trip4	99	61.458	ENSFCAG00000010618	TRIP4	98	60.794	Felis_catus
ENSMZEG00005013450	trip4	99	60.549	ENSFALG00000009816	TRIP4	99	60.549	Ficedula_albicollis
ENSMZEG00005013450	trip4	99	60.417	ENSFDAG00000017051	TRIP4	98	59.931	Fukomys_damarensis
ENSMZEG00005013450	trip4	100	84.669	ENSFHEG00000015795	trip4	100	84.669	Fundulus_heteroclitus
ENSMZEG00005013450	trip4	100	76.042	ENSGMOG00000008455	trip4	100	76.042	Gadus_morhua
ENSMZEG00005013450	trip4	98	61.724	ENSGALG00000030672	TRIP4	99	62.500	Gallus_gallus
ENSMZEG00005013450	trip4	99	83.916	ENSGAFG00000003491	trip4	99	83.916	Gambusia_affinis
ENSMZEG00005013450	trip4	100	81.100	ENSGACG00000016986	trip4	100	81.100	Gasterosteus_aculeatus
ENSMZEG00005013450	trip4	85	63.030	ENSGAGG00000003671	TRIP4	88	63.030	Gopherus_agassizii
ENSMZEG00005013450	trip4	99	61.565	ENSGGOG00000022608	TRIP4	98	60.967	Gorilla_gorilla
ENSMZEG00005013450	trip4	100	99.651	ENSHBUG00000021071	trip4	100	99.651	Haplochromis_burtoni
ENSMZEG00005013450	trip4	99	59.722	ENSHGLG00000009286	TRIP4	98	59.413	Heterocephalus_glaber_female
ENSMZEG00005013450	trip4	99	59.549	ENSHGLG00100017760	TRIP4	98	59.240	Heterocephalus_glaber_male
ENSMZEG00005013450	trip4	100	81.326	ENSHCOG00000017904	trip4	100	81.326	Hippocampus_comes
ENSMZEG00005013450	trip4	99	71.701	ENSIPUG00000013205	trip4	100	72.049	Ictalurus_punctatus
ENSMZEG00005013450	trip4	99	60.938	ENSSTOG00000014228	TRIP4	98	60.276	Ictidomys_tridecemlineatus
ENSMZEG00005013450	trip4	96	53.860	ENSJJAG00000001629	Trip4	98	54.659	Jaculus_jaculus
ENSMZEG00005013450	trip4	100	84.642	ENSKMAG00000001297	trip4	100	84.642	Kryptolebias_marmoratus
ENSMZEG00005013450	trip4	100	86.213	ENSLBEG00000018354	trip4	100	86.213	Labrus_bergylta
ENSMZEG00005013450	trip4	99	63.605	ENSLACG00000014856	TRIP4	99	63.605	Latimeria_chalumnae
ENSMZEG00005013450	trip4	99	69.444	ENSLOCG00000014993	trip4	99	69.444	Lepisosteus_oculatus
ENSMZEG00005013450	trip4	99	61.632	ENSLAFG00000017612	TRIP4	98	61.140	Loxodonta_africana
ENSMZEG00005013450	trip4	99	60.616	ENSMFAG00000036568	TRIP4	98	60.967	Macaca_fascicularis
ENSMZEG00005013450	trip4	99	60.616	ENSMMUG00000009882	TRIP4	98	60.967	Macaca_mulatta
ENSMZEG00005013450	trip4	99	60.616	ENSMNEG00000033592	TRIP4	98	60.967	Macaca_nemestrina
ENSMZEG00005013450	trip4	99	60.445	ENSMLEG00000027911	TRIP4	98	60.794	Mandrillus_leucophaeus
ENSMZEG00005013450	trip4	100	86.435	ENSMAMG00000013374	trip4	100	86.435	Mastacembelus_armatus
ENSMZEG00005013450	trip4	99	61.979	ENSMICG00000008679	TRIP4	98	61.485	Microcebus_murinus
ENSMZEG00005013450	trip4	99	61.217	ENSMOCG00000012669	Trip4	98	60.276	Microtus_ochrogaster
ENSMZEG00005013450	trip4	97	83.935	ENSMMOG00000002315	trip4	98	83.935	Mola_mola
ENSMZEG00005013450	trip4	99	62.630	ENSMODG00000010743	TRIP4	90	61.698	Monodelphis_domestica
ENSMZEG00005013450	trip4	99	60.348	MGP_CAROLIEiJ_G0032370	Trip4	98	59.413	Mus_caroli
ENSMZEG00005013450	trip4	99	60.348	ENSMUSG00000032386	Trip4	98	59.413	Mus_musculus
ENSMZEG00005013450	trip4	99	59.310	MGP_PahariEiJ_G0015235	Trip4	98	59.240	Mus_pahari
ENSMZEG00005013450	trip4	99	60.522	MGP_SPRETEiJ_G0033509	Trip4	98	59.585	Mus_spretus
ENSMZEG00005013450	trip4	99	60.243	ENSMPUG00000000568	TRIP4	98	59.343	Mustela_putorius_furo
ENSMZEG00005013450	trip4	95	60.289	ENSMLUG00000013367	TRIP4	100	60.144	Myotis_lucifugus
ENSMZEG00005013450	trip4	99	60.139	ENSNGAG00000019566	Trip4	98	59.725	Nannospalax_galili
ENSMZEG00005013450	trip4	97	96.416	ENSNBRG00000020663	trip4	98	96.416	Neolamprologus_brichardi
ENSMZEG00005013450	trip4	99	61.391	ENSNLEG00000012455	TRIP4	98	60.794	Nomascus_leucogenys
ENSMZEG00005013450	trip4	64	58.602	ENSMEUG00000005886	TRIP4	75	58.602	Notamacropus_eugenii
ENSMZEG00005013450	trip4	99	59.375	ENSOPRG00000009512	TRIP4	99	58.448	Ochotona_princeps
ENSMZEG00005013450	trip4	99	59.966	ENSODEG00000016494	TRIP4	99	59.966	Octodon_degus
ENSMZEG00005013450	trip4	92	96.958	ENSONIG00000005703	trip4	99	96.958	Oreochromis_niloticus
ENSMZEG00005013450	trip4	99	61.872	ENSOANG00000013357	TRIP4	96	61.872	Ornithorhynchus_anatinus
ENSMZEG00005013450	trip4	99	60.417	ENSOCUG00000002322	TRIP4	98	60.104	Oryctolagus_cuniculus
ENSMZEG00005013450	trip4	100	78.709	ENSORLG00000001710	trip4	100	78.709	Oryzias_latipes
ENSMZEG00005013450	trip4	100	78.709	ENSORLG00020022346	trip4	100	78.709	Oryzias_latipes_hni
ENSMZEG00005013450	trip4	100	78.360	ENSORLG00015022509	trip4	100	78.360	Oryzias_latipes_hsok
ENSMZEG00005013450	trip4	100	79.407	ENSOMEG00000007655	trip4	100	79.407	Oryzias_melastigma
ENSMZEG00005013450	trip4	99	54.623	ENSOGAG00000012427	TRIP4	99	54.623	Otolemur_garnettii
ENSMZEG00005013450	trip4	99	60.000	ENSOARG00000020739	TRIP4	97	60.000	Ovis_aries
ENSMZEG00005013450	trip4	99	61.391	ENSPPAG00000017953	TRIP4	98	60.794	Pan_paniscus
ENSMZEG00005013450	trip4	99	61.458	ENSPPRG00000013668	TRIP4	98	60.794	Panthera_pardus
ENSMZEG00005013450	trip4	99	61.285	ENSPTIG00000014502	TRIP4	98	60.622	Panthera_tigris_altaica
ENSMZEG00005013450	trip4	99	57.143	ENSPTRG00000007160	TRIP4	98	57.193	Pan_troglodytes
ENSMZEG00005013450	trip4	99	60.445	ENSPANG00000016750	TRIP4	98	60.794	Papio_anubis
ENSMZEG00005013450	trip4	92	66.793	ENSPKIG00000009253	trip4	99	66.793	Paramormyrops_kingsleyae
ENSMZEG00005013450	trip4	99	68.739	ENSPKIG00000022978	-	100	68.739	Paramormyrops_kingsleyae
ENSMZEG00005013450	trip4	95	63.082	ENSPSIG00000012082	TRIP4	98	63.082	Pelodiscus_sinensis
ENSMZEG00005013450	trip4	96	79.856	ENSPMGG00000019015	trip4	94	79.856	Periophthalmus_magnuspinnatus
ENSMZEG00005013450	trip4	99	60.069	ENSPEMG00000012446	Trip4	98	59.310	Peromyscus_maniculatus_bairdii
ENSMZEG00005013450	trip4	99	62.284	ENSPCIG00000029450	TRIP4	93	62.457	Phascolarctos_cinereus
ENSMZEG00005013450	trip4	99	84.266	ENSPFOG00000014732	trip4	99	84.266	Poecilia_formosa
ENSMZEG00005013450	trip4	99	84.091	ENSPLAG00000013794	trip4	99	84.091	Poecilia_latipinna
ENSMZEG00005013450	trip4	99	84.441	ENSPMEG00000001331	trip4	99	84.441	Poecilia_mexicana
ENSMZEG00005013450	trip4	99	83.217	ENSPREG00000006576	trip4	99	83.217	Poecilia_reticulata
ENSMZEG00005013450	trip4	99	61.565	ENSPPYG00000006550	TRIP4	98	60.967	Pongo_abelii
ENSMZEG00005013450	trip4	99	53.739	ENSPCAG00000016310	TRIP4	98	53.114	Procavia_capensis
ENSMZEG00005013450	trip4	99	46.575	ENSPCOG00000013484	TRIP4	98	47.496	Propithecus_coquereli
ENSMZEG00005013450	trip4	95	55.655	ENSPVAG00000016613	TRIP4	98	55.655	Pteropus_vampyrus
ENSMZEG00005013450	trip4	100	89.982	ENSPNYG00000011318	trip4	100	90.861	Pundamilia_nyererei
ENSMZEG00005013450	trip4	99	73.345	ENSPNAG00000020884	trip4	99	73.345	Pygocentrus_nattereri
ENSMZEG00005013450	trip4	99	59.756	ENSRNOG00000016121	Trip4	97	59.756	Rattus_norvegicus
ENSMZEG00005013450	trip4	86	62.097	ENSRBIG00000038027	TRIP4	97	62.097	Rhinopithecus_bieti
ENSMZEG00005013450	trip4	99	61.391	ENSRROG00000030525	TRIP4	98	60.794	Rhinopithecus_roxellana
ENSMZEG00005013450	trip4	99	54.130	ENSSBOG00000020516	TRIP4	98	54.965	Saimiri_boliviensis_boliviensis
ENSMZEG00005013450	trip4	95	62.816	ENSSHAG00000000040	TRIP4	100	61.844	Sarcophilus_harrisii
ENSMZEG00005013450	trip4	99	69.019	ENSSFOG00015000143	trip4	99	69.019	Scleropages_formosus
ENSMZEG00005013450	trip4	99	81.119	ENSSMAG00000010539	trip4	100	81.119	Scophthalmus_maximus
ENSMZEG00005013450	trip4	100	86.562	ENSSDUG00000000225	trip4	100	86.562	Seriola_dumerili
ENSMZEG00005013450	trip4	100	86.038	ENSSLDG00000000215	trip4	100	86.038	Seriola_lalandi_dorsalis
ENSMZEG00005013450	trip4	82	61.243	ENSSARG00000003710	TRIP4	79	61.243	Sorex_araneus
ENSMZEG00005013450	trip4	98	56.250	ENSSPUG00000004511	TRIP4	98	58.065	Sphenodon_punctatus
ENSMZEG00005013450	trip4	100	87.652	ENSSPAG00000008520	trip4	100	87.652	Stegastes_partitus
ENSMZEG00005013450	trip4	99	60.764	ENSSSCG00000004552	TRIP4	97	61.126	Sus_scrofa
ENSMZEG00005013450	trip4	99	59.413	ENSTGUG00000004673	TRIP4	99	60.622	Taeniopygia_guttata
ENSMZEG00005013450	trip4	100	80.522	ENSTRUG00000016488	trip4	100	80.522	Takifugu_rubripes
ENSMZEG00005013450	trip4	99	75.043	ENSTNIG00000009582	trip4	98	75.043	Tetraodon_nigroviridis
ENSMZEG00005013450	trip4	94	61.594	ENSTBEG00000015881	TRIP4	100	61.081	Tupaia_belangeri
ENSMZEG00005013450	trip4	87	65.574	ENSTTRG00000009674	TRIP4	86	65.574	Tursiops_truncatus
ENSMZEG00005013450	trip4	99	60.590	ENSUMAG00000012640	TRIP4	98	59.931	Ursus_maritimus
ENSMZEG00005013450	trip4	99	55.862	ENSVPAG00000010808	TRIP4	98	55.959	Vicugna_pacos
ENSMZEG00005013450	trip4	99	61.111	ENSVVUG00000013776	TRIP4	98	60.276	Vulpes_vulpes
ENSMZEG00005013450	trip4	99	59.829	ENSXETG00000010649	trip4	98	59.829	Xenopus_tropicalis
ENSMZEG00005013450	trip4	99	84.266	ENSXMAG00000000526	trip4	99	84.266	Xiphophorus_maculatus