EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005013545 (Gene tree)
Gene ID: 101486367
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 9649 bases
Position: chrLG14:14587907-14597555
Accession: 101486367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005018026	HARE-HTH	PF05066.13	1.1e-14	1	1
ENSMZEP00005018032	HARE-HTH	PF05066.13	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005018614	-	4000	XM_004543922	ENSMZEP00005018026	590 (aa)	XP_004543979	UPI000D315B86
ENSMZET00005018621	-	3937	XM_004543923	ENSMZEP00005018032	569 (aa)	XP_004543980	UPI000D31948B

Gene Model

Click here to download ENSMZEG00005013545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005013545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005013545	tbrg1	92	90.826	ENSAPOG00000017352	tbrg1	100	90.826	Acanthochromis_polyacanthus
ENSMZEG00005013545	tbrg1	85	91.865	ENSACIG00000021274	tbrg1	94	91.865	Amphilophus_citrinellus
ENSMZEG00005013545	tbrg1	92	90.275	ENSAOCG00000018605	tbrg1	100	90.275	Amphiprion_ocellaris
ENSMZEG00005013545	tbrg1	92	90.275	ENSAPEG00000022443	tbrg1	100	90.275	Amphiprion_percula
ENSMZEG00005013545	tbrg1	92	90.275	ENSATEG00000023537	tbrg1	100	90.275	Anabas_testudineus
ENSMZEG00005013545	tbrg1	92	99.816	ENSACLG00000000281	tbrg1	100	99.816	Astatotilapia_calliptera
ENSMZEG00005013545	tbrg1	91	71.193	ENSAMXG00000008381	tbrg1	98	71.193	Astyanax_mexicanus
ENSMZEG00005013545	tbrg1	92	84.982	ENSCSEG00000002445	tbrg1	100	85.897	Cynoglossus_semilaevis
ENSMZEG00005013545	tbrg1	92	81.967	ENSCVAG00000019626	tbrg1	100	81.967	Cyprinodon_variegatus
ENSMZEG00005013545	tbrg1	90	72.067	ENSDARG00000074996	tbrg1	97	72.998	Danio_rerio
ENSMZEG00005013545	tbrg1	85	48.444	ENSEBUG00000014060	tbrg1	90	48.473	Eptatretus_burgeri
ENSMZEG00005013545	tbrg1	93	77.798	ENSELUG00000017458	tbrg1	99	78.467	Esox_lucius
ENSMZEG00005013545	tbrg1	80	79.210	ENSFHEG00000004283	tbrg1	92	79.210	Fundulus_heteroclitus
ENSMZEG00005013545	tbrg1	92	82.332	ENSGAFG00000000204	tbrg1	100	82.332	Gambusia_affinis
ENSMZEG00005013545	tbrg1	92	99.816	ENSHBUG00000004935	tbrg1	100	99.816	Haplochromis_burtoni
ENSMZEG00005013545	tbrg1	92	78.986	ENSHCOG00000010588	tbrg1	100	78.986	Hippocampus_comes
ENSMZEG00005013545	tbrg1	91	71.560	ENSIPUG00000008697	tbrg1	98	71.927	Ictalurus_punctatus
ENSMZEG00005013545	tbrg1	92	83.516	ENSKMAG00000002775	tbrg1	100	84.432	Kryptolebias_marmoratus
ENSMZEG00005013545	tbrg1	93	85.688	ENSLBEG00000017559	tbrg1	99	84.151	Labrus_bergylta
ENSMZEG00005013545	tbrg1	92	74.141	ENSLOCG00000003093	tbrg1	100	74.281	Lepisosteus_oculatus
ENSMZEG00005013545	tbrg1	92	88.807	ENSMAMG00000000876	tbrg1	100	88.807	Mastacembelus_armatus
ENSMZEG00005013545	tbrg1	86	82.874	ENSMMOG00000005314	tbrg1	93	83.071	Mola_mola
ENSMZEG00005013545	tbrg1	86	89.173	ENSMALG00000011630	tbrg1	99	89.173	Monopterus_albus
ENSMZEG00005013545	tbrg1	91	97.940	ENSNBRG00000017490	tbrg1	100	97.940	Neolamprologus_brichardi
ENSMZEG00005013545	tbrg1	92	97.794	ENSONIG00000005284	tbrg1	100	97.794	Oreochromis_niloticus
ENSMZEG00005013545	tbrg1	92	82.569	ENSORLG00000014519	tbrg1	100	82.569	Oryzias_latipes
ENSMZEG00005013545	tbrg1	92	82.202	ENSORLG00020009567	tbrg1	100	82.202	Oryzias_latipes_hni
ENSMZEG00005013545	tbrg1	92	82.202	ENSORLG00015000448	tbrg1	100	82.202	Oryzias_latipes_hsok
ENSMZEG00005013545	tbrg1	92	85.138	ENSOMEG00000006130	tbrg1	100	85.138	Oryzias_melastigma
ENSMZEG00005013545	tbrg1	88	72.952	ENSPKIG00000012274	tbrg1	90	72.952	Paramormyrops_kingsleyae
ENSMZEG00005013545	tbrg1	92	79.781	ENSPMGG00000015968	tbrg1	100	80.146	Periophthalmus_magnuspinnatus
ENSMZEG00005013545	tbrg1	92	82.696	ENSPFOG00000004279	tbrg1	100	82.696	Poecilia_formosa
ENSMZEG00005013545	tbrg1	92	82.696	ENSPLAG00000001227	tbrg1	100	82.696	Poecilia_latipinna
ENSMZEG00005013545	tbrg1	92	82.514	ENSPMEG00000000955	tbrg1	100	82.514	Poecilia_mexicana
ENSMZEG00005013545	tbrg1	92	82.332	ENSPREG00000005246	tbrg1	100	82.332	Poecilia_reticulata
ENSMZEG00005013545	tbrg1	81	99.790	ENSPNYG00000012625	tbrg1	100	99.790	Pundamilia_nyererei
ENSMZEG00005013545	tbrg1	91	69.581	ENSPNAG00000028332	tbrg1	99	71.683	Pygocentrus_nattereri
ENSMZEG00005013545	tbrg1	87	75.049	ENSSFOG00015009308	tbrg1	99	68.367	Scleropages_formosus
ENSMZEG00005013545	tbrg1	93	86.131	ENSSMAG00000002529	tbrg1	100	86.264	Scophthalmus_maximus
ENSMZEG00005013545	tbrg1	92	91.912	ENSSDUG00000013674	tbrg1	99	91.912	Seriola_dumerili
ENSMZEG00005013545	tbrg1	86	90.625	ENSSLDG00000008932	tbrg1	98	90.625	Seriola_lalandi_dorsalis
ENSMZEG00005013545	tbrg1	79	89.722	ENSSPAG00000004808	tbrg1	99	89.722	Stegastes_partitus
ENSMZEG00005013545	tbrg1	87	81.238	ENSTRUG00000005960	tbrg1	98	81.238	Takifugu_rubripes
ENSMZEG00005013545	tbrg1	92	82.332	ENSXMAG00000001551	tbrg1	100	82.332	Xiphophorus_maculatus