EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005013717 (Gene tree)
Gene ID: 101483499
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 6059 bases
Position: chrLG10:9834908-9840966
Accession: 101483499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005018283	Nucleoplasmin	PF03066.15	2.9e-32	1	1
ENSMZEP00005018273	Nucleoplasmin	PF03066.15	3.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005018874	-	795	-	ENSMZEP00005018283	264 (aa)	-	-
ENSMZET00005018864	-	2800	XM_014408607	ENSMZEP00005018273	313 (aa)	XP_014264093	UPI000645EA19

Gene Model

Click here to download ENSMZEG00005013717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005013717's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005013717	npm1a	100	76.508	ENSAPOG00000002813	npm1a	99	76.825	Acanthochromis_polyacanthus
ENSMZEG00005013717	npm1a	95	81.000	ENSACIG00000014201	npm1a	100	81.333	Amphilophus_citrinellus
ENSMZEG00005013717	npm1a	88	75.000	ENSAOCG00000004978	npm1a	100	75.000	Amphiprion_ocellaris
ENSMZEG00005013717	npm1a	100	75.556	ENSAPEG00000008594	npm1a	99	75.873	Amphiprion_percula
ENSMZEG00005013717	npm1a	99	79.487	ENSATEG00000008885	npm1a	99	79.487	Anabas_testudineus
ENSMZEG00005013717	npm1a	100	97.037	ENSACLG00000008376	npm1a	100	97.037	Astatotilapia_calliptera
ENSMZEG00005013717	npm1a	98	53.247	ENSAMXG00000010155	npm1a	98	55.663	Astyanax_mexicanus
ENSMZEG00005013717	npm1a	94	68.000	ENSCSEG00000011165	npm1a	92	88.525	Cynoglossus_semilaevis
ENSMZEG00005013717	npm1a	100	66.877	ENSCVAG00000008960	npm1a	99	67.192	Cyprinodon_variegatus
ENSMZEG00005013717	npm1a	98	60.390	ENSDARG00000014329	npm1a	94	70.395	Danio_rerio
ENSMZEG00005013717	npm1a	98	36.667	ENSEBUG00000012753	npm1a	93	36.280	Eptatretus_burgeri
ENSMZEG00005013717	npm1a	100	64.669	ENSELUG00000013705	npm1a	99	64.038	Esox_lucius
ENSMZEG00005013717	npm1a	100	69.716	ENSFHEG00000012496	npm1a	99	69.716	Fundulus_heteroclitus
ENSMZEG00005013717	npm1a	100	64.873	ENSGAFG00000013059	npm1a	99	64.241	Gambusia_affinis
ENSMZEG00005013717	npm1a	99	67.628	ENSGACG00000020319	npm1a	99	65.064	Gasterosteus_aculeatus
ENSMZEG00005013717	npm1a	100	97.785	ENSHBUG00000000776	npm1a	100	97.785	Haplochromis_burtoni
ENSMZEG00005013717	npm1a	99	52.025	ENSHCOG00000001059	npm1a	98	52.025	Hippocampus_comes
ENSMZEG00005013717	npm1a	98	63.057	ENSIPUG00000019452	npm1	98	61.783	Ictalurus_punctatus
ENSMZEG00005013717	npm1a	100	68.038	ENSKMAG00000010709	npm1a	99	67.089	Kryptolebias_marmoratus
ENSMZEG00005013717	npm1a	99	71.656	ENSLBEG00000008793	npm1a	99	69.108	Labrus_bergylta
ENSMZEG00005013717	npm1a	86	55.197	ENSLOCG00000009683	npm1a	99	55.197	Lepisosteus_oculatus
ENSMZEG00005013717	npm1a	99	74.038	ENSMAMG00000009344	npm1a	82	73.718	Mastacembelus_armatus
ENSMZEG00005013717	npm1a	95	70.333	ENSMMOG00000007980	npm1a	99	69.000	Mola_mola
ENSMZEG00005013717	npm1a	99	66.139	ENSMALG00000001146	npm1a	99	67.722	Monopterus_albus
ENSMZEG00005013717	npm1a	100	85.759	ENSNBRG00000013172	npm1a	100	84.810	Neolamprologus_brichardi
ENSMZEG00005013717	npm1a	100	84.713	ENSONIG00000001860	npm1a	99	84.076	Oreochromis_niloticus
ENSMZEG00005013717	npm1a	100	68.153	ENSORLG00000010179	npm1a	99	69.745	Oryzias_latipes
ENSMZEG00005013717	npm1a	100	67.834	ENSORLG00020020817	npm1a	99	67.834	Oryzias_latipes_hni
ENSMZEG00005013717	npm1a	100	68.153	ENSORLG00015003439	npm1a	99	69.745	Oryzias_latipes_hsok
ENSMZEG00005013717	npm1a	100	69.427	ENSOMEG00000007083	npm1a	99	69.427	Oryzias_melastigma
ENSMZEG00005013717	npm1a	100	55.346	ENSPKIG00000023943	npm1a	99	54.717	Paramormyrops_kingsleyae
ENSMZEG00005013717	npm1a	100	54.459	ENSPMGG00000011716	npm1a	99	54.459	Periophthalmus_magnuspinnatus
ENSMZEG00005013717	npm1a	100	67.722	ENSPFOG00000019173	npm1a	99	66.772	Poecilia_formosa
ENSMZEG00005013717	npm1a	100	66.981	ENSPLAG00000001093	npm1a	99	66.667	Poecilia_latipinna
ENSMZEG00005013717	npm1a	100	67.722	ENSPMEG00000012523	npm1a	99	66.772	Poecilia_mexicana
ENSMZEG00005013717	npm1a	100	70.382	ENSPREG00000001647	npm1a	99	70.064	Poecilia_reticulata
ENSMZEG00005013717	npm1a	100	97.771	ENSPNYG00000019321	npm1a	100	97.771	Pundamilia_nyererei
ENSMZEG00005013717	npm1a	98	60.000	ENSPNAG00000026891	npm1a	98	58.730	Pygocentrus_nattereri
ENSMZEG00005013717	npm1a	100	58.805	ENSSFOG00015007074	npm1a	99	59.434	Scleropages_formosus
ENSMZEG00005013717	npm1a	100	72.871	ENSSMAG00000019090	npm1a	99	72.871	Scophthalmus_maximus
ENSMZEG00005013717	npm1a	100	73.418	ENSSDUG00000015609	npm1a	99	73.734	Seriola_dumerili
ENSMZEG00005013717	npm1a	100	73.734	ENSSLDG00000017849	npm1a	99	74.051	Seriola_lalandi_dorsalis
ENSMZEG00005013717	npm1a	94	75.100	ENSSPAG00000021660	npm1a	94	77.510	Stegastes_partitus
ENSMZEG00005013717	npm1a	100	74.448	ENSTRUG00000024003	npm1a	99	74.132	Takifugu_rubripes
ENSMZEG00005013717	npm1a	99	69.745	ENSTNIG00000010773	npm1a	99	69.206	Tetraodon_nigroviridis
ENSMZEG00005013717	npm1a	94	70.817	ENSXCOG00000005958	npm1a	94	70.817	Xiphophorus_couchianus
ENSMZEG00005013717	npm1a	100	66.981	ENSXMAG00000000396	npm1a	99	66.981	Xiphophorus_maculatus