EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005013835 (Gene tree)
Gene ID: 101485195
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 45941 bases
Position: chrLG1:29869741-29915681
Accession: 101485195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005018434	CPSF_A	PF03178.15	1.5e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005019029	-	4164	XM_004558034	ENSMZEP00005018434	1140 (aa)	XP_004558091	UPI0003299B41

Gene Model

Click here to download ENSMZEG00005013835's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03420	Nucleotide excision repair	KEGG
mze04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005013835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005013835	ddb1	100	91.316	ENSG00000167986	DDB1	100	95.890	Homo_sapiens
ENSMZEG00005013835	ddb1	98	98.474	ENSAPOG00000005036	ddb1	99	98.571	Acanthochromis_polyacanthus
ENSMZEG00005013835	ddb1	100	91.404	ENSAMEG00000016518	DDB1	100	91.404	Ailuropoda_melanoleuca
ENSMZEG00005013835	ddb1	86	99.082	ENSACIG00000020624	ddb1	99	99.082	Amphilophus_citrinellus
ENSMZEG00005013835	ddb1	100	98.509	ENSAOCG00000003066	ddb1	100	98.509	Amphiprion_ocellaris
ENSMZEG00005013835	ddb1	100	98.509	ENSAPEG00000000092	ddb1	100	98.509	Amphiprion_percula
ENSMZEG00005013835	ddb1	94	98.512	ENSATEG00000020571	ddb1	97	98.512	Anabas_testudineus
ENSMZEG00005013835	ddb1	99	89.823	ENSAPLG00000007174	DDB1	99	89.823	Anas_platyrhynchos
ENSMZEG00005013835	ddb1	100	90.789	ENSACAG00000017758	DDB1	100	90.789	Anolis_carolinensis
ENSMZEG00005013835	ddb1	100	91.316	ENSANAG00000021878	DDB1	100	91.316	Aotus_nancymaae
ENSMZEG00005013835	ddb1	100	99.912	ENSACLG00000012401	ddb1	100	99.912	Astatotilapia_calliptera
ENSMZEG00005013835	ddb1	100	91.316	ENSBTAG00000021569	DDB1	93	91.316	Bos_taurus
ENSMZEG00005013835	ddb1	100	36.784	WBGene00010890	ddb-1	100	36.784	Caenorhabditis_elegans
ENSMZEG00005013835	ddb1	100	91.316	ENSCJAG00000019319	DDB1	100	91.316	Callithrix_jacchus
ENSMZEG00005013835	ddb1	100	91.404	ENSCAFG00000016264	DDB1	100	91.404	Canis_familiaris
ENSMZEG00005013835	ddb1	94	91.628	ENSCAFG00020012722	DDB1	99	91.628	Canis_lupus_dingo
ENSMZEG00005013835	ddb1	100	91.316	ENSCHIG00000014969	DDB1	100	91.316	Capra_hircus
ENSMZEG00005013835	ddb1	100	90.965	ENSTSYG00000008027	DDB1	100	90.965	Carlito_syrichta
ENSMZEG00005013835	ddb1	98	91.242	ENSCAPG00000010786	DDB1	100	91.242	Cavia_aperea
ENSMZEG00005013835	ddb1	100	91.228	ENSCPOG00000009956	DDB1	100	91.228	Cavia_porcellus
ENSMZEG00005013835	ddb1	100	91.316	ENSCCAG00000035883	DDB1	100	91.316	Cebus_capucinus
ENSMZEG00005013835	ddb1	100	88.976	ENSCATG00000044495	DDB1	100	88.976	Cercocebus_atys
ENSMZEG00005013835	ddb1	100	91.316	ENSCLAG00000004126	DDB1	100	91.316	Chinchilla_lanigera
ENSMZEG00005013835	ddb1	100	91.316	ENSCSAG00000006392	DDB1	100	91.316	Chlorocebus_sabaeus
ENSMZEG00005013835	ddb1	88	84.848	ENSCHOG00000011377	DDB1	90	84.848	Choloepus_hoffmanni
ENSMZEG00005013835	ddb1	100	91.140	ENSCPBG00000017728	DDB1	100	91.140	Chrysemys_picta_bellii
ENSMZEG00005013835	ddb1	100	61.545	ENSCING00000007437	-	100	61.545	Ciona_intestinalis
ENSMZEG00005013835	ddb1	94	60.645	ENSCSAVG00000004783	-	100	60.645	Ciona_savignyi
ENSMZEG00005013835	ddb1	100	91.316	ENSCANG00000019948	DDB1	100	91.316	Colobus_angolensis_palliatus
ENSMZEG00005013835	ddb1	100	91.404	ENSCGRG00001016599	Ddb1	100	91.404	Cricetulus_griseus_chok1gshd
ENSMZEG00005013835	ddb1	100	91.404	ENSCGRG00000013427	Ddb1	100	91.404	Cricetulus_griseus_crigri
ENSMZEG00005013835	ddb1	93	97.926	ENSCSEG00000012499	ddb1	99	96.255	Cynoglossus_semilaevis
ENSMZEG00005013835	ddb1	94	97.484	ENSCVAG00000019531	ddb1	99	97.484	Cyprinodon_variegatus
ENSMZEG00005013835	ddb1	100	92.382	ENSDARG00000074431	ddb1	100	92.382	Danio_rerio
ENSMZEG00005013835	ddb1	94	91.628	ENSDNOG00000014884	DDB1	97	91.628	Dasypus_novemcinctus
ENSMZEG00005013835	ddb1	84	95.000	ENSDORG00000000127	Ddb1	100	95.000	Dipodomys_ordii
ENSMZEG00005013835	ddb1	100	60.524	FBgn0260962	pic	100	60.524	Drosophila_melanogaster
ENSMZEG00005013835	ddb1	77	30.065	FBgn0024698	Cpsf160	67	30.065	Drosophila_melanogaster
ENSMZEG00005013835	ddb1	71	94.882	ENSETEG00000001053	-	71	94.882	Echinops_telfairi
ENSMZEG00005013835	ddb1	78	83.690	ENSEBUG00000014593	ddb1	97	83.690	Eptatretus_burgeri
ENSMZEG00005013835	ddb1	100	91.404	ENSEASG00005008184	DDB1	100	91.404	Equus_asinus_asinus
ENSMZEG00005013835	ddb1	100	91.404	ENSECAG00000012136	DDB1	100	91.404	Equus_caballus
ENSMZEG00005013835	ddb1	85	87.710	ENSEEUG00000003194	DDB1	85	87.710	Erinaceus_europaeus
ENSMZEG00005013835	ddb1	100	96.930	ENSELUG00000023868	ddb1	100	96.930	Esox_lucius
ENSMZEG00005013835	ddb1	100	91.404	ENSFCAG00000029716	DDB1	100	91.404	Felis_catus
ENSMZEG00005013835	ddb1	100	90.551	ENSFALG00000011981	DDB1	100	90.551	Ficedula_albicollis
ENSMZEG00005013835	ddb1	100	91.316	ENSFDAG00000005128	DDB1	100	91.316	Fukomys_damarensis
ENSMZEG00005013835	ddb1	90	96.774	ENSFHEG00000022133	ddb1	99	96.774	Fundulus_heteroclitus
ENSMZEG00005013835	ddb1	79	98.662	ENSGMOG00000019386	ddb1	94	98.662	Gadus_morhua
ENSMZEG00005013835	ddb1	100	90.965	ENSGALG00000042333	DDB1	100	90.965	Gallus_gallus
ENSMZEG00005013835	ddb1	94	97.856	ENSGAFG00000013142	ddb1	99	97.856	Gambusia_affinis
ENSMZEG00005013835	ddb1	96	97.159	ENSGACG00000017182	ddb1	100	97.159	Gasterosteus_aculeatus
ENSMZEG00005013835	ddb1	95	90.959	ENSGAGG00000014124	DDB1	100	90.959	Gopherus_agassizii
ENSMZEG00005013835	ddb1	100	91.316	ENSGGOG00000004052	DDB1	100	91.316	Gorilla_gorilla
ENSMZEG00005013835	ddb1	100	99.912	ENSHBUG00000008873	ddb1	100	99.912	Haplochromis_burtoni
ENSMZEG00005013835	ddb1	100	91.228	ENSHGLG00000018430	DDB1	100	91.228	Heterocephalus_glaber_female
ENSMZEG00005013835	ddb1	100	90.263	ENSHGLG00100014475	DDB1	100	90.263	Heterocephalus_glaber_male
ENSMZEG00005013835	ddb1	94	97.862	ENSHCOG00000018670	ddb1	98	97.862	Hippocampus_comes
ENSMZEG00005013835	ddb1	100	95.877	ENSIPUG00000005612	DDB1	100	95.877	Ictalurus_punctatus
ENSMZEG00005013835	ddb1	100	91.316	ENSSTOG00000007552	DDB1	100	91.316	Ictidomys_tridecemlineatus
ENSMZEG00005013835	ddb1	100	91.228	ENSJJAG00000017769	Ddb1	100	91.228	Jaculus_jaculus
ENSMZEG00005013835	ddb1	94	97.950	ENSKMAG00000002315	ddb1	99	97.950	Kryptolebias_marmoratus
ENSMZEG00005013835	ddb1	84	98.751	ENSLBEG00000017065	ddb1	99	98.751	Labrus_bergylta
ENSMZEG00005013835	ddb1	100	90.893	ENSLACG00000017611	DDB1	100	90.893	Latimeria_chalumnae
ENSMZEG00005013835	ddb1	92	87.676	ENSLOCG00000000012	ddb1	100	87.676	Lepisosteus_oculatus
ENSMZEG00005013835	ddb1	100	91.228	ENSLAFG00000011513	DDB1	100	91.228	Loxodonta_africana
ENSMZEG00005013835	ddb1	100	91.316	ENSMFAG00000042035	DDB1	100	91.316	Macaca_fascicularis
ENSMZEG00005013835	ddb1	99	91.335	ENSMMUG00000002691	DDB1	99	91.335	Macaca_mulatta
ENSMZEG00005013835	ddb1	100	91.316	ENSMNEG00000031559	DDB1	100	91.316	Macaca_nemestrina
ENSMZEG00005013835	ddb1	100	91.316	ENSMLEG00000044136	DDB1	100	91.316	Mandrillus_leucophaeus
ENSMZEG00005013835	ddb1	100	98.947	ENSMAMG00000014372	ddb1	100	98.947	Mastacembelus_armatus
ENSMZEG00005013835	ddb1	94	90.223	ENSMGAG00000004990	DDB1	100	90.223	Meleagris_gallopavo
ENSMZEG00005013835	ddb1	100	91.404	ENSMAUG00000012926	Ddb1	100	91.404	Mesocricetus_auratus
ENSMZEG00005013835	ddb1	100	91.491	ENSMICG00000013703	DDB1	100	91.491	Microcebus_murinus
ENSMZEG00005013835	ddb1	100	91.228	ENSMOCG00000020499	Ddb1	100	91.228	Microtus_ochrogaster
ENSMZEG00005013835	ddb1	86	98.878	ENSMMOG00000001758	ddb1	99	98.878	Mola_mola
ENSMZEG00005013835	ddb1	100	82.526	ENSMODG00000020353	DDB1	100	82.526	Monodelphis_domestica
ENSMZEG00005013835	ddb1	100	98.860	ENSMALG00000014071	ddb1	100	98.860	Monopterus_albus
ENSMZEG00005013835	ddb1	100	91.404	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.404	Mus_caroli
ENSMZEG00005013835	ddb1	100	91.491	ENSMUSG00000024740	Ddb1	100	91.491	Mus_musculus
ENSMZEG00005013835	ddb1	100	91.404	MGP_PahariEiJ_G0014189	Ddb1	100	91.404	Mus_pahari
ENSMZEG00005013835	ddb1	100	91.491	MGP_SPRETEiJ_G0023609	Ddb1	100	91.491	Mus_spretus
ENSMZEG00005013835	ddb1	100	88.246	ENSMPUG00000014200	DDB1	100	88.246	Mustela_putorius_furo
ENSMZEG00005013835	ddb1	100	91.491	ENSMLUG00000013232	DDB1	100	91.491	Myotis_lucifugus
ENSMZEG00005013835	ddb1	100	91.316	ENSNGAG00000009384	Ddb1	100	91.316	Nannospalax_galili
ENSMZEG00005013835	ddb1	100	99.825	ENSNBRG00000019581	ddb1	100	99.825	Neolamprologus_brichardi
ENSMZEG00005013835	ddb1	100	88.542	ENSNLEG00000002022	DDB1	100	88.542	Nomascus_leucogenys
ENSMZEG00005013835	ddb1	90	93.310	ENSMEUG00000001099	DDB1	93	93.310	Notamacropus_eugenii
ENSMZEG00005013835	ddb1	90	82.735	ENSOPRG00000008254	DDB1	90	82.735	Ochotona_princeps
ENSMZEG00005013835	ddb1	100	91.404	ENSODEG00000002419	DDB1	100	91.404	Octodon_degus
ENSMZEG00005013835	ddb1	100	99.825	ENSONIG00000005804	ddb1	100	99.825	Oreochromis_niloticus
ENSMZEG00005013835	ddb1	91	91.182	ENSOANG00000004897	DDB1	100	91.182	Ornithorhynchus_anatinus
ENSMZEG00005013835	ddb1	100	91.316	ENSOCUG00000001667	DDB1	100	91.316	Oryctolagus_cuniculus
ENSMZEG00005013835	ddb1	96	96.242	ENSORLG00000001399	ddb1	98	97.598	Oryzias_latipes
ENSMZEG00005013835	ddb1	96	96.150	ENSORLG00020001277	ddb1	97	96.150	Oryzias_latipes_hni
ENSMZEG00005013835	ddb1	94	97.395	ENSORLG00015002080	ddb1	99	97.395	Oryzias_latipes_hsok
ENSMZEG00005013835	ddb1	96	95.898	ENSOMEG00000006181	ddb1	99	95.898	Oryzias_melastigma
ENSMZEG00005013835	ddb1	100	91.491	ENSOGAG00000016103	DDB1	100	91.491	Otolemur_garnettii
ENSMZEG00005013835	ddb1	99	91.541	ENSOARG00000011716	DDB1	98	91.541	Ovis_aries
ENSMZEG00005013835	ddb1	100	91.316	ENSPPAG00000035343	DDB1	100	91.316	Pan_paniscus
ENSMZEG00005013835	ddb1	100	91.404	ENSPPRG00000013300	DDB1	100	91.404	Panthera_pardus
ENSMZEG00005013835	ddb1	98	91.421	ENSPTIG00000006909	DDB1	98	91.421	Panthera_tigris_altaica
ENSMZEG00005013835	ddb1	100	91.316	ENSPTRG00000003737	DDB1	100	91.316	Pan_troglodytes
ENSMZEG00005013835	ddb1	100	91.316	ENSPANG00000000242	DDB1	100	91.316	Papio_anubis
ENSMZEG00005013835	ddb1	94	95.899	ENSPKIG00000019213	ddb1	94	95.899	Paramormyrops_kingsleyae
ENSMZEG00005013835	ddb1	98	90.569	ENSPSIG00000013275	DDB1	100	90.569	Pelodiscus_sinensis
ENSMZEG00005013835	ddb1	86	98.367	ENSPMGG00000021179	ddb1	99	98.367	Periophthalmus_magnuspinnatus
ENSMZEG00005013835	ddb1	100	91.404	ENSPEMG00000012241	Ddb1	100	91.404	Peromyscus_maniculatus_bairdii
ENSMZEG00005013835	ddb1	89	86.444	ENSPMAG00000008479	ddb1	100	86.444	Petromyzon_marinus
ENSMZEG00005013835	ddb1	100	91.579	ENSPCIG00000002643	DDB1	100	91.579	Phascolarctos_cinereus
ENSMZEG00005013835	ddb1	100	97.897	ENSPFOG00000002768	ddb1	100	97.897	Poecilia_formosa
ENSMZEG00005013835	ddb1	100	97.807	ENSPLAG00000017227	ddb1	100	97.807	Poecilia_latipinna
ENSMZEG00005013835	ddb1	100	97.807	ENSPMEG00000011398	ddb1	100	97.807	Poecilia_mexicana
ENSMZEG00005013835	ddb1	94	97.953	ENSPREG00000004440	ddb1	98	97.953	Poecilia_reticulata
ENSMZEG00005013835	ddb1	100	86.998	ENSPPYG00000003193	DDB1	100	86.998	Pongo_abelii
ENSMZEG00005013835	ddb1	85	89.254	ENSPCAG00000011040	DDB1	85	89.254	Procavia_capensis
ENSMZEG00005013835	ddb1	100	90.280	ENSPCOG00000015176	DDB1	100	90.280	Propithecus_coquereli
ENSMZEG00005013835	ddb1	100	91.228	ENSPVAG00000003847	DDB1	100	91.228	Pteropus_vampyrus
ENSMZEG00005013835	ddb1	94	96.272	ENSPNAG00000006635	ddb1	97	96.272	Pygocentrus_nattereri
ENSMZEG00005013835	ddb1	100	91.491	ENSRNOG00000020715	Ddb1	100	91.491	Rattus_norvegicus
ENSMZEG00005013835	ddb1	100	91.316	ENSRBIG00000033611	DDB1	100	91.316	Rhinopithecus_bieti
ENSMZEG00005013835	ddb1	100	91.316	ENSRROG00000041407	DDB1	100	91.316	Rhinopithecus_roxellana
ENSMZEG00005013835	ddb1	100	91.404	ENSSBOG00000019775	DDB1	100	91.404	Saimiri_boliviensis_boliviensis
ENSMZEG00005013835	ddb1	94	89.159	ENSSHAG00000011600	DDB1	100	89.159	Sarcophilus_harrisii
ENSMZEG00005013835	ddb1	94	96.097	ENSSFOG00015011151	ddb1	97	96.097	Scleropages_formosus
ENSMZEG00005013835	ddb1	100	98.333	ENSSMAG00000009495	ddb1	100	98.333	Scophthalmus_maximus
ENSMZEG00005013835	ddb1	100	98.772	ENSSDUG00000004642	ddb1	100	98.772	Seriola_dumerili
ENSMZEG00005013835	ddb1	100	98.772	ENSSLDG00000015804	ddb1	100	98.772	Seriola_lalandi_dorsalis
ENSMZEG00005013835	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSMZEG00005013835	ddb1	100	91.053	ENSSPUG00000019338	DDB1	100	91.053	Sphenodon_punctatus
ENSMZEG00005013835	ddb1	94	98.419	ENSSPAG00000009888	ddb1	99	98.419	Stegastes_partitus
ENSMZEG00005013835	ddb1	100	90.526	ENSSSCG00000013094	DDB1	100	90.526	Sus_scrofa
ENSMZEG00005013835	ddb1	100	90.702	ENSTGUG00000006414	DDB1	100	90.702	Taeniopygia_guttata
ENSMZEG00005013835	ddb1	94	96.831	ENSTRUG00000016682	ddb1	98	96.831	Takifugu_rubripes
ENSMZEG00005013835	ddb1	88	92.415	ENSTNIG00000009565	ddb1	99	92.415	Tetraodon_nigroviridis
ENSMZEG00005013835	ddb1	92	85.640	ENSTTRG00000011055	DDB1	94	85.640	Tursiops_truncatus
ENSMZEG00005013835	ddb1	94	91.628	ENSUAMG00000017793	DDB1	93	91.628	Ursus_americanus
ENSMZEG00005013835	ddb1	94	91.628	ENSUMAG00000011788	DDB1	98	91.628	Ursus_maritimus
ENSMZEG00005013835	ddb1	90	86.891	ENSVPAG00000007963	DDB1	92	86.891	Vicugna_pacos
ENSMZEG00005013835	ddb1	100	91.404	ENSVVUG00000004987	DDB1	100	91.404	Vulpes_vulpes
ENSMZEG00005013835	ddb1	100	88.549	ENSXETG00000008820	ddb1	100	88.549	Xenopus_tropicalis
ENSMZEG00005013835	ddb1	86	98.163	ENSXCOG00000013956	ddb1	99	98.163	Xiphophorus_couchianus
ENSMZEG00005013835	ddb1	94	97.856	ENSXMAG00000000022	ddb1	99	97.856	Xiphophorus_maculatus