EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005014146 (Gene tree)
Gene ID: 101479833
Gene Symbol: sympk
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 12933 bases
Position: chrLG16:28371963-28384895
Accession: 101479833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005018877	Symplekin_C	PF12295.8	6.7e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005019484	-	3904	XM_004559108	ENSMZEP00005018877	1221 (aa)	XP_004559165	UPI0003297EF4

Gene Model

Click here to download ENSMZEG00005014146's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG
mze04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005014146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005014146	sympk	91	74.506	ENSG00000125755	SYMPK	88	78.906	Homo_sapiens
ENSMZEG00005014146	sympk	100	89.675	ENSAPOG00000015934	sympk	98	90.628	Acanthochromis_polyacanthus
ENSMZEG00005014146	sympk	91	74.596	ENSAMEG00000000680	SYMPK	89	73.194	Ailuropoda_melanoleuca
ENSMZEG00005014146	sympk	98	90.924	ENSACIG00000006357	sympk	91	96.211	Amphilophus_citrinellus
ENSMZEG00005014146	sympk	100	90.163	ENSAOCG00000024124	sympk	100	89.350	Amphiprion_ocellaris
ENSMZEG00005014146	sympk	100	89.350	ENSAPEG00000003465	sympk	100	89.106	Amphiprion_percula
ENSMZEG00005014146	sympk	100	89.431	ENSATEG00000008472	sympk	100	89.431	Anabas_testudineus
ENSMZEG00005014146	sympk	81	75.176	ENSACAG00000004126	SYMPK	83	75.176	Anolis_carolinensis
ENSMZEG00005014146	sympk	91	74.506	ENSANAG00000021087	SYMPK	97	75.452	Aotus_nancymaae
ENSMZEG00005014146	sympk	100	100.000	ENSACLG00000001813	sympk	100	100.000	Astatotilapia_calliptera
ENSMZEG00005014146	sympk	91	82.400	ENSAMXG00000013677	sympk	92	82.400	Astyanax_mexicanus
ENSMZEG00005014146	sympk	91	74.843	ENSBTAG00000012101	SYMPK	88	74.268	Bos_taurus
ENSMZEG00005014146	sympk	91	74.506	ENSCJAG00000012172	SYMPK	97	73.930	Callithrix_jacchus
ENSMZEG00005014146	sympk	91	74.776	ENSCAFG00000004376	SYMPK	87	74.357	Canis_familiaris
ENSMZEG00005014146	sympk	91	74.776	ENSCAFG00020001815	SYMPK	87	74.357	Canis_lupus_dingo
ENSMZEG00005014146	sympk	91	74.933	ENSCHIG00000026784	SYMPK	88	74.357	Capra_hircus
ENSMZEG00005014146	sympk	91	74.776	ENSTSYG00000006268	SYMPK	95	73.973	Carlito_syrichta
ENSMZEG00005014146	sympk	86	72.950	ENSCAPG00000005112	SYMPK	95	72.805	Cavia_aperea
ENSMZEG00005014146	sympk	92	73.936	ENSCPOG00000010434	SYMPK	89	73.936	Cavia_porcellus
ENSMZEG00005014146	sympk	91	74.506	ENSCCAG00000036309	SYMPK	97	75.235	Cebus_capucinus
ENSMZEG00005014146	sympk	91	74.596	ENSCATG00000045107	SYMPK	98	75.212	Cercocebus_atys
ENSMZEG00005014146	sympk	92	73.736	ENSCLAG00000001206	SYMPK	88	73.736	Chinchilla_lanigera
ENSMZEG00005014146	sympk	91	74.596	ENSCSAG00000003115	SYMPK	89	73.194	Chlorocebus_sabaeus
ENSMZEG00005014146	sympk	68	90.909	ENSCHOG00000012456	SYMPK	75	90.909	Choloepus_hoffmanni
ENSMZEG00005014146	sympk	90	75.543	ENSCPBG00000007170	SYMPK	88	75.543	Chrysemys_picta_bellii
ENSMZEG00005014146	sympk	86	48.918	ENSCING00000021232	-	96	48.918	Ciona_intestinalis
ENSMZEG00005014146	sympk	85	48.127	ENSCSAVG00000005154	-	99	48.321	Ciona_savignyi
ENSMZEG00005014146	sympk	91	73.108	ENSCANG00000040907	SYMPK	98	73.091	Colobus_angolensis_palliatus
ENSMZEG00005014146	sympk	84	74.247	ENSCGRG00001010086	Sympk	87	71.960	Cricetulus_griseus_chok1gshd
ENSMZEG00005014146	sympk	98	86.838	ENSCSEG00000016802	sympk	96	87.405	Cynoglossus_semilaevis
ENSMZEG00005014146	sympk	98	77.075	ENSDARG00000059553	sympk	89	82.088	Danio_rerio
ENSMZEG00005014146	sympk	91	74.373	ENSDNOG00000016149	SYMPK	88	72.980	Dasypus_novemcinctus
ENSMZEG00005014146	sympk	86	37.546	FBgn0037371	Sym	91	37.546	Drosophila_melanogaster
ENSMZEG00005014146	sympk	76	55.987	ENSEBUG00000000387	sympk	88	59.953	Eptatretus_burgeri
ENSMZEG00005014146	sympk	91	74.776	ENSEASG00005014227	SYMPK	89	73.368	Equus_asinus_asinus
ENSMZEG00005014146	sympk	91	74.776	ENSECAG00000008163	SYMPK	89	73.368	Equus_caballus
ENSMZEG00005014146	sympk	71	74.652	ENSEEUG00000000270	-	79	74.652	Erinaceus_europaeus
ENSMZEG00005014146	sympk	94	83.419	ENSELUG00000000850	sympk	93	83.590	Esox_lucius
ENSMZEG00005014146	sympk	91	74.776	ENSFCAG00000007337	SYMPK	88	74.357	Felis_catus
ENSMZEG00005014146	sympk	91	73.968	ENSFDAG00000011272	SYMPK	88	73.558	Fukomys_damarensis
ENSMZEG00005014146	sympk	100	85.959	ENSFHEG00000010274	sympk	95	88.321	Fundulus_heteroclitus
ENSMZEG00005014146	sympk	89	84.594	ENSGMOG00000002357	sympk	99	84.594	Gadus_morhua
ENSMZEG00005014146	sympk	90	90.000	ENSGAFG00000010976	sympk	95	87.113	Gambusia_affinis
ENSMZEG00005014146	sympk	99	86.064	ENSGACG00000002735	sympk	100	89.184	Gasterosteus_aculeatus
ENSMZEG00005014146	sympk	65	67.618	ENSGAGG00000012538	-	88	73.788	Gopherus_agassizii
ENSMZEG00005014146	sympk	91	74.506	ENSGGOG00000003410	SYMPK	96	74.859	Gorilla_gorilla
ENSMZEG00005014146	sympk	100	99.509	ENSHBUG00000023564	sympk	100	99.509	Haplochromis_burtoni
ENSMZEG00005014146	sympk	91	70.287	ENSHGLG00000005228	SYMPK	87	69.920	Heterocephalus_glaber_female
ENSMZEG00005014146	sympk	90	74.663	ENSHGLG00100018571	SYMPK	88	74.527	Heterocephalus_glaber_male
ENSMZEG00005014146	sympk	89	85.175	ENSHCOG00000017400	sympk	90	85.175	Hippocampus_comes
ENSMZEG00005014146	sympk	98	77.887	ENSIPUG00000024020	SYMPK	88	83.532	Ictalurus_punctatus
ENSMZEG00005014146	sympk	90	75.159	ENSSTOG00000001534	SYMPK	89	73.275	Ictidomys_tridecemlineatus
ENSMZEG00005014146	sympk	94	72.476	ENSJJAG00000006633	Sympk	87	73.959	Jaculus_jaculus
ENSMZEG00005014146	sympk	100	86.367	ENSKMAG00000016292	sympk	93	89.661	Kryptolebias_marmoratus
ENSMZEG00005014146	sympk	100	88.509	ENSLBEG00000027913	sympk	96	90.397	Labrus_bergylta
ENSMZEG00005014146	sympk	89	70.513	ENSLACG00000016497	SYMPK	91	70.716	Latimeria_chalumnae
ENSMZEG00005014146	sympk	91	74.776	ENSLAFG00000008726	SYMPK	89	73.368	Loxodonta_africana
ENSMZEG00005014146	sympk	91	74.596	ENSMMUG00000015428	SYMPK	93	73.699	Macaca_mulatta
ENSMZEG00005014146	sympk	94	72.649	ENSMNEG00000019439	SYMPK	98	75.212	Macaca_nemestrina
ENSMZEG00005014146	sympk	94	72.649	ENSMLEG00000040508	SYMPK	98	75.212	Mandrillus_leucophaeus
ENSMZEG00005014146	sympk	100	89.015	ENSMAMG00000010486	sympk	96	90.391	Mastacembelus_armatus
ENSMZEG00005014146	sympk	90	74.004	ENSMAUG00000015657	Sympk	89	71.965	Mesocricetus_auratus
ENSMZEG00005014146	sympk	91	74.506	ENSMICG00000001871	SYMPK	90	73.668	Microcebus_murinus
ENSMZEG00005014146	sympk	91	74.147	ENSMOCG00000008388	Sympk	89	72.759	Microtus_ochrogaster
ENSMZEG00005014146	sympk	100	83.961	ENSMMOG00000019227	sympk	98	88.220	Mola_mola
ENSMZEG00005014146	sympk	90	75.182	ENSMODG00000021534	SYMPK	86	74.864	Monodelphis_domestica
ENSMZEG00005014146	sympk	77	88.723	ENSMALG00000008347	sympk	96	89.149	Monopterus_albus
ENSMZEG00005014146	sympk	91	74.147	MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	Mus_caroli
ENSMZEG00005014146	sympk	91	74.057	ENSMUSG00000023118	Sympk	76	86.239	Mus_musculus
ENSMZEG00005014146	sympk	91	74.281	MGP_PahariEiJ_G0021127	Sympk	77	86.239	Mus_pahari
ENSMZEG00005014146	sympk	91	74.283	MGP_SPRETEiJ_G0030351	-	77	86.239	Mus_spretus
ENSMZEG00005014146	sympk	91	73.609	ENSMPUG00000005505	SYMPK	88	72.237	Mustela_putorius_furo
ENSMZEG00005014146	sympk	73	71.872	ENSMLUG00000001359	SYMPK	92	70.601	Myotis_lucifugus
ENSMZEG00005014146	sympk	91	74.057	ENSNGAG00000000820	Sympk	88	73.582	Nannospalax_galili
ENSMZEG00005014146	sympk	92	98.758	ENSNBRG00000018101	sympk	97	98.758	Neolamprologus_brichardi
ENSMZEG00005014146	sympk	91	64.222	ENSNLEG00000002369	SYMPK	87	64.103	Nomascus_leucogenys
ENSMZEG00005014146	sympk	91	73.094	ENSOPRG00000009967	SYMPK	89	71.652	Ochotona_princeps
ENSMZEG00005014146	sympk	96	70.750	ENSODEG00000007519	SYMPK	88	74.091	Octodon_degus
ENSMZEG00005014146	sympk	94	97.304	ENSONIG00000016802	sympk	100	97.304	Oreochromis_niloticus
ENSMZEG00005014146	sympk	78	73.646	ENSOCUG00000005511	SYMPK	89	73.486	Oryctolagus_cuniculus
ENSMZEG00005014146	sympk	100	86.330	ENSORLG00000015338	sympk	97	90.073	Oryzias_latipes
ENSMZEG00005014146	sympk	100	86.493	ENSORLG00020004402	sympk	95	88.955	Oryzias_latipes_hni
ENSMZEG00005014146	sympk	100	86.412	ENSORLG00015005712	sympk	95	88.784	Oryzias_latipes_hsok
ENSMZEG00005014146	sympk	100	87.236	ENSOMEG00000022561	sympk	96	88.795	Oryzias_melastigma
ENSMZEG00005014146	sympk	91	74.686	ENSOGAG00000013483	SYMPK	89	73.281	Otolemur_garnettii
ENSMZEG00005014146	sympk	88	72.903	ENSOARG00000010349	SYMPK	85	72.903	Ovis_aries
ENSMZEG00005014146	sympk	91	74.506	ENSPPAG00000043204	SYMPK	94	73.562	Pan_paniscus
ENSMZEG00005014146	sympk	91	74.776	ENSPPRG00000004282	SYMPK	89	73.368	Panthera_pardus
ENSMZEG00005014146	sympk	90	75.159	ENSPTIG00000015420	SYMPK	93	74.887	Panthera_tigris_altaica
ENSMZEG00005014146	sympk	91	74.506	ENSPTRG00000011169	SYMPK	94	73.562	Pan_troglodytes
ENSMZEG00005014146	sympk	91	74.596	ENSPANG00000019930	SYMPK	98	75.212	Papio_anubis
ENSMZEG00005014146	sympk	99	78.548	ENSPKIG00000017132	sympk	91	84.053	Paramormyrops_kingsleyae
ENSMZEG00005014146	sympk	91	74.147	ENSPEMG00000007564	Sympk	89	72.759	Peromyscus_maniculatus_bairdii
ENSMZEG00005014146	sympk	84	64.943	ENSPMAG00000004936	sympk	100	65.038	Petromyzon_marinus
ENSMZEG00005014146	sympk	90	75.023	ENSPCIG00000024476	SYMPK	90	72.847	Phascolarctos_cinereus
ENSMZEG00005014146	sympk	90	89.502	ENSPFOG00000001194	sympk	92	88.799	Poecilia_formosa
ENSMZEG00005014146	sympk	90	89.502	ENSPLAG00000012995	sympk	92	88.799	Poecilia_latipinna
ENSMZEG00005014146	sympk	90	89.502	ENSPMEG00000008099	sympk	92	88.799	Poecilia_mexicana
ENSMZEG00005014146	sympk	90	89.636	ENSPREG00000006176	sympk	93	87.357	Poecilia_reticulata
ENSMZEG00005014146	sympk	90	74.772	ENSPPYG00000010135	SYMPK	98	74.772	Pongo_abelii
ENSMZEG00005014146	sympk	84	76.906	ENSPCAG00000005182	SYMPK	82	73.279	Procavia_capensis
ENSMZEG00005014146	sympk	94	72.563	ENSPCOG00000023740	SYMPK	98	75.094	Propithecus_coquereli
ENSMZEG00005014146	sympk	91	73.339	ENSPVAG00000001355	SYMPK	91	71.976	Pteropus_vampyrus
ENSMZEG00005014146	sympk	100	98.295	ENSPNYG00000011455	sympk	100	98.295	Pundamilia_nyererei
ENSMZEG00005014146	sympk	98	78.695	ENSPNAG00000016505	sympk	90	82.701	Pygocentrus_nattereri
ENSMZEG00005014146	sympk	90	74.524	ENSRNOG00000014353	Sympk	89	72.498	Rattus_norvegicus
ENSMZEG00005014146	sympk	91	74.596	ENSRBIG00000040963	SYMPK	97	75.429	Rhinopithecus_bieti
ENSMZEG00005014146	sympk	91	74.596	ENSRROG00000024834	SYMPK	95	75.024	Rhinopithecus_roxellana
ENSMZEG00005014146	sympk	91	74.417	ENSSBOG00000034497	SYMPK	95	73.562	Saimiri_boliviensis_boliviensis
ENSMZEG00005014146	sympk	94	71.840	ENSSHAG00000003139	SYMPK	98	71.840	Sarcophilus_harrisii
ENSMZEG00005014146	sympk	98	78.606	ENSSFOG00015006974	sympk	91	82.476	Scleropages_formosus
ENSMZEG00005014146	sympk	100	87.227	ENSSMAG00000018130	sympk	77	89.890	Scophthalmus_maximus
ENSMZEG00005014146	sympk	100	90.000	ENSSDUG00000007092	sympk	100	90.000	Seriola_dumerili
ENSMZEG00005014146	sympk	100	89.919	ENSSLDG00000014774	sympk	100	89.919	Seriola_lalandi_dorsalis
ENSMZEG00005014146	sympk	57	84.615	ENSSARG00000004274	-	61	84.615	Sorex_araneus
ENSMZEG00005014146	sympk	91	74.955	ENSSPUG00000002789	SYMPK	85	74.821	Sphenodon_punctatus
ENSMZEG00005014146	sympk	100	89.675	ENSSPAG00000000854	sympk	100	89.431	Stegastes_partitus
ENSMZEG00005014146	sympk	91	74.573	ENSSSCG00000003093	SYMPK	88	74.002	Sus_scrofa
ENSMZEG00005014146	sympk	100	85.261	ENSTRUG00000010202	sympk	95	87.265	Takifugu_rubripes
ENSMZEG00005014146	sympk	88	89.907	ENSTNIG00000017855	sympk	97	88.808	Tetraodon_nigroviridis
ENSMZEG00005014146	sympk	80	88.235	ENSTBEG00000000454	SYMPK	76	88.235	Tupaia_belangeri
ENSMZEG00005014146	sympk	91	66.667	ENSTTRG00000014311	SYMPK	88	66.193	Tursiops_truncatus
ENSMZEG00005014146	sympk	94	70.319	ENSUAMG00000022272	SYMPK	94	72.689	Ursus_americanus
ENSMZEG00005014146	sympk	91	74.596	ENSUMAG00000023698	SYMPK	89	73.194	Ursus_maritimus
ENSMZEG00005014146	sympk	90	75.159	ENSVVUG00000003024	SYMPK	95	75.159	Vulpes_vulpes
ENSMZEG00005014146	sympk	97	65.369	ENSXETG00000024453	sympk	90	69.945	Xenopus_tropicalis
ENSMZEG00005014146	sympk	88	88.170	ENSXCOG00000015368	sympk	100	88.170	Xiphophorus_couchianus
ENSMZEG00005014146	sympk	90	89.321	ENSXMAG00000005737	sympk	95	86.856	Xiphophorus_maculatus