EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005014205 (Gene tree)
Gene ID: 101470647
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 12354 bases
Position: chrLG7:31541814-31554167
Accession: 101470647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005018965	CPL	PF08144.11	2.2e-49	1	1
ENSMZEP00005018945	CPL	PF08144.11	1.3e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005019572	-	1896	-	ENSMZEP00005018965	631 (aa)	-	-
ENSMZET00005019553	-	3467	XM_004538513	ENSMZEP00005018945	662 (aa)	XP_004538570	-

Gene Model

Click here to download ENSMZEG00005014205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005014205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005014205	pum3	97	55.030	ENSG00000080608	PUM3	99	55.030	Homo_sapiens
ENSMZEG00005014205	pum3	97	80.183	ENSAPOG00000020252	pum3	100	80.488	Acanthochromis_polyacanthus
ENSMZEG00005014205	pum3	97	53.784	ENSAMEG00000012187	PUM3	99	54.940	Ailuropoda_melanoleuca
ENSMZEG00005014205	pum3	85	87.257	ENSACIG00000009786	pum3	94	87.257	Amphilophus_citrinellus
ENSMZEG00005014205	pum3	97	80.640	ENSAOCG00000004439	pum3	100	80.945	Amphiprion_ocellaris
ENSMZEG00005014205	pum3	97	80.793	ENSAPEG00000020523	pum3	100	81.098	Amphiprion_percula
ENSMZEG00005014205	pum3	97	79.692	ENSATEG00000005799	pum3	99	80.308	Anabas_testudineus
ENSMZEG00005014205	pum3	97	55.140	ENSAPLG00000002920	PUM3	98	55.644	Anas_platyrhynchos
ENSMZEG00005014205	pum3	91	54.801	ENSACAG00000003174	PUM3	99	55.629	Anolis_carolinensis
ENSMZEG00005014205	pum3	93	55.333	ENSANAG00000024520	PUM3	91	57.980	Aotus_nancymaae
ENSMZEG00005014205	pum3	97	99.227	ENSACLG00000001017	pum3	100	99.227	Astatotilapia_calliptera
ENSMZEG00005014205	pum3	96	62.481	ENSAMXG00000020911	pum3	99	62.481	Astyanax_mexicanus
ENSMZEG00005014205	pum3	95	56.240	ENSBTAG00000013357	PUM3	92	57.305	Bos_taurus
ENSMZEG00005014205	pum3	81	30.037	WBGene00014165	puf-12	70	30.037	Caenorhabditis_elegans
ENSMZEG00005014205	pum3	93	54.849	ENSCJAG00000010917	PUM3	97	55.436	Callithrix_jacchus
ENSMZEG00005014205	pum3	97	53.301	ENSCAFG00000002035	PUM3	91	57.283	Canis_familiaris
ENSMZEG00005014205	pum3	97	53.301	ENSCAFG00020026867	PUM3	91	57.283	Canis_lupus_dingo
ENSMZEG00005014205	pum3	95	56.398	ENSCHIG00000021559	PUM3	92	57.468	Capra_hircus
ENSMZEG00005014205	pum3	97	54.328	ENSTSYG00000007481	PUM3	99	54.478	Carlito_syrichta
ENSMZEG00005014205	pum3	94	53.191	ENSCAPG00000010592	-	98	54.242	Cavia_aperea
ENSMZEG00005014205	pum3	93	57.143	ENSCPOG00000008552	-	92	57.143	Cavia_porcellus
ENSMZEG00005014205	pum3	97	55.300	ENSCCAG00000032650	PUM3	91	57.492	Cebus_capucinus
ENSMZEG00005014205	pum3	97	55.142	ENSCATG00000024880	PUM3	99	55.291	Cercocebus_atys
ENSMZEG00005014205	pum3	95	54.812	ENSCLAG00000011892	PUM3	94	56.918	Chinchilla_lanigera
ENSMZEG00005014205	pum3	93	55.500	ENSCSAG00000008691	PUM3	99	55.142	Chlorocebus_sabaeus
ENSMZEG00005014205	pum3	75	51.200	ENSCHOG00000002535	PUM3	74	51.200	Choloepus_hoffmanni
ENSMZEG00005014205	pum3	97	55.283	ENSCPBG00000025470	PUM3	95	55.896	Chrysemys_picta_bellii
ENSMZEG00005014205	pum3	85	37.282	ENSCING00000024199	-	99	37.282	Ciona_intestinalis
ENSMZEG00005014205	pum3	88	37.186	ENSCSAVG00000006072	-	99	37.786	Ciona_savignyi
ENSMZEG00005014205	pum3	93	55.500	ENSCANG00000006142	PUM3	91	58.143	Colobus_angolensis_palliatus
ENSMZEG00005014205	pum3	97	54.410	ENSCGRG00001016402	Pum3	99	55.007	Cricetulus_griseus_chok1gshd
ENSMZEG00005014205	pum3	97	54.410	ENSCGRG00000010207	Pum3	99	55.007	Cricetulus_griseus_crigri
ENSMZEG00005014205	pum3	86	74.232	ENSCSEG00000001565	pum3	99	74.232	Cynoglossus_semilaevis
ENSMZEG00005014205	pum3	75	73.529	ENSCVAG00000006550	pum3	100	73.529	Cyprinodon_variegatus
ENSMZEG00005014205	pum3	96	60.964	ENSDARG00000087779	pum3	99	60.964	Danio_rerio
ENSMZEG00005014205	pum3	95	47.619	ENSDNOG00000008157	PUM3	63	50.326	Dasypus_novemcinctus
ENSMZEG00005014205	pum3	79	61.027	ENSETEG00000015331	PUM3	84	59.392	Echinops_telfairi
ENSMZEG00005014205	pum3	79	39.098	ENSEBUG00000011586	pum3	85	37.755	Eptatretus_burgeri
ENSMZEG00005014205	pum3	94	54.651	ENSEASG00005010350	PUM3	92	57.305	Equus_asinus_asinus
ENSMZEG00005014205	pum3	94	54.651	ENSECAG00000017193	PUM3	92	57.305	Equus_caballus
ENSMZEG00005014205	pum3	91	49.261	ENSEEUG00000010314	PUM3	97	49.589	Erinaceus_europaeus
ENSMZEG00005014205	pum3	96	60.546	ENSELUG00000002215	pum3	99	60.546	Esox_lucius
ENSMZEG00005014205	pum3	97	54.394	ENSFALG00000010509	PUM3	99	54.394	Ficedula_albicollis
ENSMZEG00005014205	pum3	97	55.335	ENSFDAG00000021027	PUM3	95	56.740	Fukomys_damarensis
ENSMZEG00005014205	pum3	90	77.225	ENSFHEG00000015576	pum3	100	77.225	Fundulus_heteroclitus
ENSMZEG00005014205	pum3	80	70.113	ENSGMOG00000014217	pum3	99	70.113	Gadus_morhua
ENSMZEG00005014205	pum3	97	54.230	ENSGALG00000010178	PUM3	100	54.476	Gallus_gallus
ENSMZEG00005014205	pum3	54	75.616	ENSGAFG00000001930	pum3	62	75.616	Gambusia_affinis
ENSMZEG00005014205	pum3	82	79.963	ENSGACG00000017878	pum3	99	79.963	Gasterosteus_aculeatus
ENSMZEG00005014205	pum3	97	55.199	ENSGAGG00000018983	PUM3	99	55.352	Gopherus_agassizii
ENSMZEG00005014205	pum3	94	54.876	ENSGGOG00000006143	PUM3	91	57.512	Gorilla_gorilla
ENSMZEG00005014205	pum3	99	88.254	ENSHBUG00000012903	pum3	95	90.713	Haplochromis_burtoni
ENSMZEG00005014205	pum3	97	55.725	ENSHGLG00000015868	-	99	55.878	Heterocephalus_glaber_female
ENSMZEG00005014205	pum3	97	55.725	ENSHGLG00100018825	PUM3	99	55.878	Heterocephalus_glaber_male
ENSMZEG00005014205	pum3	97	72.131	ENSHCOG00000010306	pum3	100	72.795	Hippocampus_comes
ENSMZEG00005014205	pum3	92	61.003	ENSIPUG00000024801	pum3	99	60.736	Ictalurus_punctatus
ENSMZEG00005014205	pum3	97	55.963	ENSSTOG00000009586	PUM3	96	56.105	Ictidomys_tridecemlineatus
ENSMZEG00005014205	pum3	97	54.878	ENSJJAG00000012563	Pum3	99	54.878	Jaculus_jaculus
ENSMZEG00005014205	pum3	97	78.915	ENSKMAG00000010277	pum3	100	78.915	Kryptolebias_marmoratus
ENSMZEG00005014205	pum3	97	78.756	ENSLBEG00000012213	pum3	100	79.211	Labrus_bergylta
ENSMZEG00005014205	pum3	97	53.272	ENSLACG00000008312	PUM3	99	53.343	Latimeria_chalumnae
ENSMZEG00005014205	pum3	97	60.062	ENSLOCG00000012529	pum3	100	60.062	Lepisosteus_oculatus
ENSMZEG00005014205	pum3	98	55.521	ENSLAFG00000017341	PUM3	96	55.982	Loxodonta_africana
ENSMZEG00005014205	pum3	93	55.333	ENSMFAG00000001430	PUM3	99	55.142	Macaca_fascicularis
ENSMZEG00005014205	pum3	93	55.333	ENSMMUG00000002362	PUM3	98	55.142	Macaca_mulatta
ENSMZEG00005014205	pum3	93	55.333	ENSMNEG00000035288	PUM3	99	55.142	Macaca_nemestrina
ENSMZEG00005014205	pum3	93	55.333	ENSMLEG00000034820	PUM3	99	55.142	Mandrillus_leucophaeus
ENSMZEG00005014205	pum3	96	79.289	ENSMAMG00000022861	pum3	99	80.062	Mastacembelus_armatus
ENSMZEG00005014205	pum3	80	55.367	ENSMGAG00000002255	PUM3	94	48.603	Meleagris_gallopavo
ENSMZEG00005014205	pum3	97	54.179	ENSMAUG00000009733	Pum3	99	55.075	Mesocricetus_auratus
ENSMZEG00005014205	pum3	99	52.615	ENSMICG00000045916	PUM3	86	53.374	Microcebus_murinus
ENSMZEG00005014205	pum3	95	54.700	ENSMOCG00000019519	-	99	54.938	Microtus_ochrogaster
ENSMZEG00005014205	pum3	97	54.033	ENSMOCG00000014830	-	99	54.033	Microtus_ochrogaster
ENSMZEG00005014205	pum3	93	72.771	ENSMMOG00000012184	pum3	99	72.771	Mola_mola
ENSMZEG00005014205	pum3	79	60.952	ENSMODG00000015417	PUM3	83	52.700	Monodelphis_domestica
ENSMZEG00005014205	pum3	98	79.363	ENSMALG00000022164	pum3	93	79.818	Monopterus_albus
ENSMZEG00005014205	pum3	93	55.000	MGP_CAROLIEiJ_G0022845	Pum3	96	56.173	Mus_caroli
ENSMZEG00005014205	pum3	93	54.531	ENSMUSG00000041360	Pum3	96	55.556	Mus_musculus
ENSMZEG00005014205	pum3	95	53.191	MGP_PahariEiJ_G0014338	Pum3	96	55.332	Mus_pahari
ENSMZEG00005014205	pum3	93	54.531	MGP_SPRETEiJ_G0023763	Pum3	96	55.556	Mus_spretus
ENSMZEG00005014205	pum3	96	55.712	ENSMPUG00000005125	PUM3	91	56.863	Mustela_putorius_furo
ENSMZEG00005014205	pum3	94	55.092	ENSMLUG00000002309	PUM3	92	57.143	Myotis_lucifugus
ENSMZEG00005014205	pum3	78	61.089	ENSNGAG00000019468	Pum3	99	52.576	Nannospalax_galili
ENSMZEG00005014205	pum3	99	95.223	ENSNBRG00000021370	pum3	99	95.223	Neolamprologus_brichardi
ENSMZEG00005014205	pum3	93	55.500	ENSNLEG00000008712	PUM3	99	55.291	Nomascus_leucogenys
ENSMZEG00005014205	pum3	60	63.366	ENSMEUG00000013606	-	97	44.828	Notamacropus_eugenii
ENSMZEG00005014205	pum3	53	53.714	ENSOPRG00000004225	-	61	72.340	Ochotona_princeps
ENSMZEG00005014205	pum3	97	55.864	ENSODEG00000003625	-	96	55.951	Octodon_degus
ENSMZEG00005014205	pum3	97	51.846	ENSODEG00000016477	-	95	51.846	Octodon_degus
ENSMZEG00005014205	pum3	97	96.610	ENSONIG00000012733	pum3	100	96.610	Oreochromis_niloticus
ENSMZEG00005014205	pum3	79	58.634	ENSOANG00000014995	PUM3	99	57.143	Ornithorhynchus_anatinus
ENSMZEG00005014205	pum3	97	55.251	ENSOCUG00000004189	-	99	55.007	Oryctolagus_cuniculus
ENSMZEG00005014205	pum3	97	55.199	ENSOCUG00000026104	-	99	53.364	Oryctolagus_cuniculus
ENSMZEG00005014205	pum3	97	71.560	ENSORLG00000014935	pum3	100	71.560	Oryzias_latipes
ENSMZEG00005014205	pum3	97	71.254	ENSORLG00020002841	pum3	100	71.254	Oryzias_latipes_hni
ENSMZEG00005014205	pum3	97	72.018	ENSORLG00015015906	pum3	100	72.018	Oryzias_latipes_hsok
ENSMZEG00005014205	pum3	97	71.560	ENSOMEG00000009427	pum3	100	71.560	Oryzias_melastigma
ENSMZEG00005014205	pum3	97	55.030	ENSOGAG00000008125	-	99	55.183	Otolemur_garnettii
ENSMZEG00005014205	pum3	77	46.809	ENSOGAG00000033481	-	99	40.958	Otolemur_garnettii
ENSMZEG00005014205	pum3	95	56.535	ENSOARG00000013337	PUM3	92	57.605	Ovis_aries
ENSMZEG00005014205	pum3	97	54.726	ENSPPAG00000041337	PUM3	99	54.962	Pan_paniscus
ENSMZEG00005014205	pum3	93	56.169	ENSPPRG00000000809	PUM3	91	56.260	Panthera_pardus
ENSMZEG00005014205	pum3	93	56.656	ENSPTIG00000021934	PUM3	91	56.748	Panthera_tigris_altaica
ENSMZEG00005014205	pum3	97	54.878	ENSPTRG00000020735	PUM3	99	55.115	Pan_troglodytes
ENSMZEG00005014205	pum3	99	53.058	ENSPANG00000025118	PUM3	99	55.440	Papio_anubis
ENSMZEG00005014205	pum3	99	60.329	ENSPKIG00000022249	pum3	99	59.711	Paramormyrops_kingsleyae
ENSMZEG00005014205	pum3	97	55.352	ENSPSIG00000016272	PUM3	99	55.505	Pelodiscus_sinensis
ENSMZEG00005014205	pum3	75	73.131	ENSPMGG00000021261	pum3	99	73.131	Periophthalmus_magnuspinnatus
ENSMZEG00005014205	pum3	97	45.821	ENSPEMG00000019340	-	99	45.821	Peromyscus_maniculatus_bairdii
ENSMZEG00005014205	pum3	88	56.050	ENSPCIG00000030598	PUM3	72	60.788	Phascolarctos_cinereus
ENSMZEG00005014205	pum3	97	69.612	ENSPFOG00000001719	pum3	100	69.612	Poecilia_formosa
ENSMZEG00005014205	pum3	97	72.403	ENSPLAG00000020010	pum3	100	72.403	Poecilia_latipinna
ENSMZEG00005014205	pum3	97	71.938	ENSPMEG00000017451	pum3	100	71.938	Poecilia_mexicana
ENSMZEG00005014205	pum3	56	77.368	ENSPREG00000019478	-	80	77.368	Poecilia_reticulata
ENSMZEG00005014205	pum3	97	56.308	ENSPPYG00000019255	PUM3	99	55.224	Pongo_abelii
ENSMZEG00005014205	pum3	97	49.466	ENSPCAG00000005797	PUM3	94	47.846	Procavia_capensis
ENSMZEG00005014205	pum3	97	54.434	ENSPCOG00000027325	PUM3	92	57.120	Propithecus_coquereli
ENSMZEG00005014205	pum3	95	54.337	ENSPVAG00000016135	PUM3	88	54.649	Pteropus_vampyrus
ENSMZEG00005014205	pum3	97	98.609	ENSPNYG00000016124	pum3	100	98.609	Pundamilia_nyererei
ENSMZEG00005014205	pum3	97	58.359	ENSPNAG00000026524	pum3	99	59.784	Pygocentrus_nattereri
ENSMZEG00005014205	pum3	95	53.519	ENSRNOG00000048356	RGD1308750	96	55.590	Rattus_norvegicus
ENSMZEG00005014205	pum3	95	53.846	ENSRNOG00000012574	Pum3	96	55.901	Rattus_norvegicus
ENSMZEG00005014205	pum3	93	55.500	ENSRBIG00000036924	PUM3	91	58.143	Rhinopithecus_bieti
ENSMZEG00005014205	pum3	93	55.333	ENSRROG00000041089	PUM3	91	57.980	Rhinopithecus_roxellana
ENSMZEG00005014205	pum3	97	55.538	ENSSBOG00000028066	PUM3	99	54.844	Saimiri_boliviensis_boliviensis
ENSMZEG00005014205	pum3	97	54.186	ENSSHAG00000003730	PUM3	99	54.009	Sarcophilus_harrisii
ENSMZEG00005014205	pum3	97	60.276	ENSSFOG00015018778	pum3	99	60.276	Scleropages_formosus
ENSMZEG00005014205	pum3	97	79.289	ENSSMAG00000013236	pum3	99	79.538	Scophthalmus_maximus
ENSMZEG00005014205	pum3	97	80.241	ENSSDUG00000001887	pum3	99	80.694	Seriola_dumerili
ENSMZEG00005014205	pum3	97	81.069	ENSSLDG00000015766	pum3	99	81.527	Seriola_lalandi_dorsalis
ENSMZEG00005014205	pum3	95	53.165	ENSSARG00000000579	PUM3	99	53.155	Sorex_araneus
ENSMZEG00005014205	pum3	95	55.000	ENSSPUG00000001707	PUM3	99	54.884	Sphenodon_punctatus
ENSMZEG00005014205	pum3	97	80.184	ENSSPAG00000003976	pum3	100	80.184	Stegastes_partitus
ENSMZEG00005014205	pum3	97	55.590	ENSSSCG00000005227	PUM3	97	55.743	Sus_scrofa
ENSMZEG00005014205	pum3	94	55.607	ENSTGUG00000005339	PUM3	99	54.854	Taeniopygia_guttata
ENSMZEG00005014205	pum3	98	75.415	ENSTRUG00000004074	pum3	99	75.415	Takifugu_rubripes
ENSMZEG00005014205	pum3	97	72.798	ENSTNIG00000010325	pum3	98	73.107	Tetraodon_nigroviridis
ENSMZEG00005014205	pum3	79	45.644	ENSTBEG00000013058	PUM3	84	44.920	Tupaia_belangeri
ENSMZEG00005014205	pum3	98	49.923	ENSTTRG00000001062	PUM3	93	50.077	Tursiops_truncatus
ENSMZEG00005014205	pum3	94	51.500	ENSUMAG00000018443	PUM3	99	58.302	Ursus_maritimus
ENSMZEG00005014205	pum3	95	56.378	ENSVPAG00000010766	PUM3	93	56.535	Vicugna_pacos
ENSMZEG00005014205	pum3	97	53.140	ENSVVUG00000006527	PUM3	91	57.119	Vulpes_vulpes
ENSMZEG00005014205	pum3	97	46.914	ENSXETG00000011707	pum3	94	48.000	Xenopus_tropicalis
ENSMZEG00005014205	pum3	92	69.231	ENSXCOG00000006725	pum3	100	69.231	Xiphophorus_couchianus
ENSMZEG00005014205	pum3	97	70.853	ENSXMAG00000002926	pum3	100	70.853	Xiphophorus_maculatus