EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005014503 (Gene tree)
Gene ID: 101484116
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 4982 bases
Position: chrAGTA05000268.1:74921-79902
Accession: 101484116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005019331	TruB_N	PF01509.18	4.8e-19	1	1
ENSMZEP00005019331	PUA	PF01472.20	1.5e-16	1	1
ENSMZEP00005019331	DKCLD	PF08068.12	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005019957	-	1940	XM_012924308	ENSMZEP00005019331	500 (aa)	XP_012779762	UPI0006CF0E9E

Gene Model

Click here to download ENSMZEG00005014503's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005014503's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005014503	dkc1	86	80.587	ENSG00000130826	DKC1	99	87.317	Homo_sapiens
ENSMZEG00005014503	dkc1	99	88.735	ENSAPOG00000007799	dkc1	99	88.735	Acanthochromis_polyacanthus
ENSMZEG00005014503	dkc1	84	83.971	ENSAMEG00000002776	DKC1	82	83.971	Ailuropoda_melanoleuca
ENSMZEG00005014503	dkc1	95	91.023	ENSACIG00000022614	dkc1	97	91.023	Amphilophus_citrinellus
ENSMZEG00005014503	dkc1	99	88.955	ENSAOCG00000013159	dkc1	95	88.273	Amphiprion_ocellaris
ENSMZEG00005014503	dkc1	99	88.955	ENSAPEG00000002284	dkc1	99	88.955	Amphiprion_percula
ENSMZEG00005014503	dkc1	87	88.063	ENSATEG00000013682	dkc1	94	86.875	Anabas_testudineus
ENSMZEG00005014503	dkc1	86	80.135	ENSACAG00000015600	DKC1	80	78.448	Anolis_carolinensis
ENSMZEG00005014503	dkc1	86	80.813	ENSANAG00000022732	DKC1	86	81.179	Aotus_nancymaae
ENSMZEG00005014503	dkc1	96	94.154	ENSACLG00000015605	dkc1	98	94.154	Astatotilapia_calliptera
ENSMZEG00005014503	dkc1	90	85.714	ENSAMXG00000017108	dkc1	99	83.236	Astyanax_mexicanus
ENSMZEG00005014503	dkc1	93	77.468	ENSBTAG00000013045	DKC1	87	80.543	Bos_taurus
ENSMZEG00005014503	dkc1	81	65.271	WBGene00010478	K01G5.5	94	62.617	Caenorhabditis_elegans
ENSMZEG00005014503	dkc1	86	81.406	ENSCJAG00000004210	DKC1	85	81.777	Callithrix_jacchus
ENSMZEG00005014503	dkc1	88	71.364	ENSCAFG00000009311	-	78	76.768	Canis_familiaris
ENSMZEG00005014503	dkc1	89	79.241	ENSCAFG00000019620	-	81	82.898	Canis_familiaris
ENSMZEG00005014503	dkc1	79	75.758	ENSCAFG00020009379	-	75	75.758	Canis_lupus_dingo
ENSMZEG00005014503	dkc1	89	79.241	ENSCAFG00020008918	-	81	82.898	Canis_lupus_dingo
ENSMZEG00005014503	dkc1	92	77.273	ENSCHIG00000017392	DKC1	86	80.822	Capra_hircus
ENSMZEG00005014503	dkc1	86	79.601	ENSTSYG00000007681	DKC1	86	79.601	Carlito_syrichta
ENSMZEG00005014503	dkc1	80	81.174	ENSCAPG00000003342	DKC1	92	81.436	Cavia_aperea
ENSMZEG00005014503	dkc1	89	79.050	ENSCPOG00000008825	DKC1	90	78.834	Cavia_porcellus
ENSMZEG00005014503	dkc1	86	71.332	ENSCCAG00000027418	DKC1	85	71.332	Cebus_capucinus
ENSMZEG00005014503	dkc1	86	80.135	ENSCATG00000033602	DKC1	86	80.499	Cercocebus_atys
ENSMZEG00005014503	dkc1	86	80.726	ENSCLAG00000000720	DKC1	87	80.726	Chinchilla_lanigera
ENSMZEG00005014503	dkc1	86	80.135	ENSCSAG00000006706	DKC1	86	80.499	Chlorocebus_sabaeus
ENSMZEG00005014503	dkc1	91	78.632	ENSCPBG00000005858	DKC1	90	84.323	Chrysemys_picta_bellii
ENSMZEG00005014503	dkc1	79	80.000	ENSCING00000004599	-	83	74.142	Ciona_intestinalis
ENSMZEG00005014503	dkc1	79	79.949	ENSCSAVG00000010047	-	93	76.134	Ciona_savignyi
ENSMZEG00005014503	dkc1	86	80.135	ENSCANG00000027987	DKC1	86	80.499	Colobus_angolensis_palliatus
ENSMZEG00005014503	dkc1	78	65.039	ENSCGRG00001016789	-	79	66.757	Cricetulus_griseus_chok1gshd
ENSMZEG00005014503	dkc1	98	74.409	ENSCGRG00001014574	-	94	75.926	Cricetulus_griseus_chok1gshd
ENSMZEG00005014503	dkc1	98	74.409	ENSCGRG00000016075	-	94	75.926	Cricetulus_griseus_crigri
ENSMZEG00005014503	dkc1	78	65.039	ENSCGRG00000014809	-	77	66.757	Cricetulus_griseus_crigri
ENSMZEG00005014503	dkc1	93	86.296	ENSCSEG00000012633	dkc1	96	86.393	Cynoglossus_semilaevis
ENSMZEG00005014503	dkc1	93	89.316	ENSCVAG00000010155	dkc1	91	89.316	Cyprinodon_variegatus
ENSMZEG00005014503	dkc1	87	88.940	ENSDARG00000016484	dkc1	97	84.350	Danio_rerio
ENSMZEG00005014503	dkc1	86	81.306	ENSDNOG00000004218	DKC1	86	81.306	Dasypus_novemcinctus
ENSMZEG00005014503	dkc1	59	70.333	ENSDORG00000013566	-	100	70.333	Dipodomys_ordii
ENSMZEG00005014503	dkc1	86	69.425	FBgn0259937	Nop60B	88	70.500	Drosophila_melanogaster
ENSMZEG00005014503	dkc1	86	79.007	ENSETEG00000016095	DKC1	90	79.007	Echinops_telfairi
ENSMZEG00005014503	dkc1	66	78.116	ENSEBUG00000015962	dkc1	98	82.131	Eptatretus_burgeri
ENSMZEG00005014503	dkc1	51	61.265	ENSEBUG00000016062	dkc1	98	61.265	Eptatretus_burgeri
ENSMZEG00005014503	dkc1	92	77.391	ENSEASG00005007484	DKC1	77	85.572	Equus_asinus_asinus
ENSMZEG00005014503	dkc1	95	76.160	ENSECAG00000023524	DKC1	77	85.572	Equus_caballus
ENSMZEG00005014503	dkc1	78	86.957	ENSEEUG00000003323	DKC1	99	82.578	Erinaceus_europaeus
ENSMZEG00005014503	dkc1	90	87.556	ENSELUG00000014538	dkc1	95	84.886	Esox_lucius
ENSMZEG00005014503	dkc1	84	83.886	ENSFCAG00000006577	DKC1	83	83.649	Felis_catus
ENSMZEG00005014503	dkc1	85	82.232	ENSFALG00000011496	DKC1	85	81.920	Ficedula_albicollis
ENSMZEG00005014503	dkc1	89	78.876	ENSFDAG00000002516	DKC1	87	80.974	Fukomys_damarensis
ENSMZEG00005014503	dkc1	90	89.532	ENSFHEG00000004627	dkc1	97	88.706	Fundulus_heteroclitus
ENSMZEG00005014503	dkc1	78	89.514	ENSGMOG00000017277	dkc1	100	89.514	Gadus_morhua
ENSMZEG00005014503	dkc1	88	82.080	ENSGALG00000005054	DKC1	89	80.174	Gallus_gallus
ENSMZEG00005014503	dkc1	90	90.708	ENSGAFG00000011486	dkc1	82	90.188	Gambusia_affinis
ENSMZEG00005014503	dkc1	80	93.719	ENSGACG00000004373	dkc1	96	94.833	Gasterosteus_aculeatus
ENSMZEG00005014503	dkc1	91	79.274	ENSGAGG00000011330	DKC1	89	80.828	Gopherus_agassizii
ENSMZEG00005014503	dkc1	86	80.587	ENSGGOG00000001045	DKC1	86	80.952	Gorilla_gorilla
ENSMZEG00005014503	dkc1	100	99.800	ENSHBUG00000012436	dkc1	100	99.800	Haplochromis_burtoni
ENSMZEG00005014503	dkc1	80	85.536	ENSHGLG00000000649	DKC1	91	77.919	Heterocephalus_glaber_female
ENSMZEG00005014503	dkc1	80	85.536	ENSHGLG00100001153	DKC1	92	77.919	Heterocephalus_glaber_male
ENSMZEG00005014503	dkc1	97	85.597	ENSHCOG00000021099	dkc1	95	85.597	Hippocampus_comes
ENSMZEG00005014503	dkc1	89	85.965	ENSIPUG00000010309	dkc1	100	82.979	Ictalurus_punctatus
ENSMZEG00005014503	dkc1	86	80.361	ENSSTOG00000001074	-	91	80.361	Ictidomys_tridecemlineatus
ENSMZEG00005014503	dkc1	86	74.306	ENSSTOG00000020149	-	85	74.306	Ictidomys_tridecemlineatus
ENSMZEG00005014503	dkc1	86	69.438	ENSSTOG00000011904	-	82	69.438	Ictidomys_tridecemlineatus
ENSMZEG00005014503	dkc1	55	73.285	ENSJJAG00000010086	-	92	73.285	Jaculus_jaculus
ENSMZEG00005014503	dkc1	90	87.305	ENSKMAG00000008010	dkc1	95	87.789	Kryptolebias_marmoratus
ENSMZEG00005014503	dkc1	90	91.314	ENSLBEG00000019122	dkc1	97	90.295	Labrus_bergylta
ENSMZEG00005014503	dkc1	91	79.521	ENSLACG00000014025	DKC1	91	85.714	Latimeria_chalumnae
ENSMZEG00005014503	dkc1	91	85.217	ENSLOCG00000013713	dkc1	88	88.863	Lepisosteus_oculatus
ENSMZEG00005014503	dkc1	86	81.081	ENSLAFG00000000221	DKC1	86	81.081	Loxodonta_africana
ENSMZEG00005014503	dkc1	86	80.135	ENSMFAG00000032398	DKC1	74	80.135	Macaca_fascicularis
ENSMZEG00005014503	dkc1	86	80.135	ENSMMUG00000005768	DKC1	86	80.499	Macaca_mulatta
ENSMZEG00005014503	dkc1	86	80.135	ENSMNEG00000034503	DKC1	86	80.499	Macaca_nemestrina
ENSMZEG00005014503	dkc1	86	80.135	ENSMLEG00000034422	DKC1	86	80.499	Mandrillus_leucophaeus
ENSMZEG00005014503	dkc1	84	91.924	ENSMAMG00000005427	dkc1	91	94.089	Mastacembelus_armatus
ENSMZEG00005014503	dkc1	77	85.606	ENSMGAG00000009238	DKC1	94	79.724	Meleagris_gallopavo
ENSMZEG00005014503	dkc1	59	69.667	ENSMAUG00000016454	-	100	69.667	Mesocricetus_auratus
ENSMZEG00005014503	dkc1	79	73.529	ENSMICG00000002818	-	99	76.374	Microcebus_murinus
ENSMZEG00005014503	dkc1	86	79.863	ENSMICG00000038751	-	87	79.863	Microcebus_murinus
ENSMZEG00005014503	dkc1	59	66.000	ENSMOCG00000001169	-	100	66.000	Microtus_ochrogaster
ENSMZEG00005014503	dkc1	82	94.363	ENSMMOG00000020348	dkc1	87	94.486	Mola_mola
ENSMZEG00005014503	dkc1	80	86.216	ENSMODG00000009243	DKC1	69	86.216	Monodelphis_domestica
ENSMZEG00005014503	dkc1	99	86.800	ENSMALG00000009454	dkc1	96	86.503	Monopterus_albus
ENSMZEG00005014503	dkc1	86	70.022	MGP_CAROLIEiJ_G0033191	Dkc1	86	82.540	Mus_caroli
ENSMZEG00005014503	dkc1	86	80.543	ENSMUSG00000031403	Dkc1	100	70.000	Mus_musculus
ENSMZEG00005014503	dkc1	95	75.464	MGP_PahariEiJ_G0031735	Dkc1	98	73.913	Mus_pahari
ENSMZEG00005014503	dkc1	86	80.543	MGP_SPRETEiJ_G0034351	Dkc1	100	70.000	Mus_spretus
ENSMZEG00005014503	dkc1	92	78.525	ENSMPUG00000016136	DKC1	77	83.971	Mustela_putorius_furo
ENSMZEG00005014503	dkc1	83	80.714	ENSMLUG00000011918	DKC1	96	72.892	Myotis_lucifugus
ENSMZEG00005014503	dkc1	56	72.760	ENSNGAG00000015724	-	92	72.760	Nannospalax_galili
ENSMZEG00005014503	dkc1	84	97.619	ENSNBRG00000005638	dkc1	85	97.619	Neolamprologus_brichardi
ENSMZEG00005014503	dkc1	86	80.361	ENSNLEG00000014323	DKC1	86	80.726	Nomascus_leucogenys
ENSMZEG00005014503	dkc1	91	75.771	ENSMEUG00000001066	DKC1	97	75.551	Notamacropus_eugenii
ENSMZEG00005014503	dkc1	70	80.172	ENSOPRG00000005248	DKC1	69	80.172	Ochotona_princeps
ENSMZEG00005014503	dkc1	59	70.333	ENSODEG00000000549	-	100	70.000	Octodon_degus
ENSMZEG00005014503	dkc1	80	87.282	ENSODEG00000011816	-	86	82.420	Octodon_degus
ENSMZEG00005014503	dkc1	100	96.813	ENSONIG00000013889	dkc1	100	96.813	Oreochromis_niloticus
ENSMZEG00005014503	dkc1	56	62.000	ENSOANG00000022295	-	84	62.126	Ornithorhynchus_anatinus
ENSMZEG00005014503	dkc1	84	83.411	ENSOANG00000008713	-	96	79.140	Ornithorhynchus_anatinus
ENSMZEG00005014503	dkc1	85	80.638	ENSOCUG00000012646	DKC1	86	80.638	Oryctolagus_cuniculus
ENSMZEG00005014503	dkc1	90	86.475	ENSORLG00000018748	dkc1	90	85.934	Oryzias_latipes
ENSMZEG00005014503	dkc1	100	85.230	ENSOMEG00000005786	dkc1	90	85.802	Oryzias_melastigma
ENSMZEG00005014503	dkc1	89	77.801	ENSOGAG00000003399	DKC1	90	77.590	Otolemur_garnettii
ENSMZEG00005014503	dkc1	92	77.489	ENSOARG00000003047	DKC1	86	80.822	Ovis_aries
ENSMZEG00005014503	dkc1	86	80.587	ENSPPAG00000023820	DKC1	86	80.952	Pan_paniscus
ENSMZEG00005014503	dkc1	84	83.886	ENSPPRG00000009104	DKC1	83	83.649	Panthera_pardus
ENSMZEG00005014503	dkc1	85	82.160	ENSPTIG00000017469	DKC1	86	82.160	Panthera_tigris_altaica
ENSMZEG00005014503	dkc1	86	80.587	ENSPTRG00000022449	DKC1	86	80.952	Pan_troglodytes
ENSMZEG00005014503	dkc1	96	76.016	ENSPTRG00000043416	-	82	76.016	Pan_troglodytes
ENSMZEG00005014503	dkc1	86	80.135	ENSPANG00000011978	DKC1	86	80.499	Papio_anubis
ENSMZEG00005014503	dkc1	90	85.777	ENSPKIG00000008443	dkc1	98	82.796	Paramormyrops_kingsleyae
ENSMZEG00005014503	dkc1	72	89.944	ENSPSIG00000013765	DKC1	86	89.944	Pelodiscus_sinensis
ENSMZEG00005014503	dkc1	91	79.325	ENSPMGG00000004097	dkc1	88	79.245	Periophthalmus_magnuspinnatus
ENSMZEG00005014503	dkc1	67	78.974	ENSPEMG00000013348	Dkc1	88	78.974	Peromyscus_maniculatus_bairdii
ENSMZEG00005014503	dkc1	80	86.035	ENSPCIG00000016706	DKC1	68	86.035	Phascolarctos_cinereus
ENSMZEG00005014503	dkc1	90	90.708	ENSPFOG00000018653	dkc1	95	90.397	Poecilia_formosa
ENSMZEG00005014503	dkc1	90	90.708	ENSPLAG00000003272	dkc1	86	90.397	Poecilia_latipinna
ENSMZEG00005014503	dkc1	90	90.708	ENSPMEG00000010413	dkc1	95	90.397	Poecilia_mexicana
ENSMZEG00005014503	dkc1	90	90.708	ENSPREG00000004100	dkc1	91	89.032	Poecilia_reticulata
ENSMZEG00005014503	dkc1	86	80.587	ENSPPYG00000020892	DKC1	86	80.952	Pongo_abelii
ENSMZEG00005014503	dkc1	75	86.096	ENSPCAG00000015034	DKC1	73	86.096	Procavia_capensis
ENSMZEG00005014503	dkc1	86	80.587	ENSPCOG00000026874	DKC1	86	80.952	Propithecus_coquereli
ENSMZEG00005014503	dkc1	86	81.481	ENSPVAG00000009222	DKC1	86	81.860	Pteropus_vampyrus
ENSMZEG00005014503	dkc1	96	94.501	ENSPNYG00000020063	dkc1	98	94.501	Pundamilia_nyererei
ENSMZEG00005014503	dkc1	90	85.153	ENSPNAG00000005780	dkc1	99	81.696	Pygocentrus_nattereri
ENSMZEG00005014503	dkc1	89	75.751	ENSRNOG00000055562	Dkc1	91	75.322	Rattus_norvegicus
ENSMZEG00005014503	dkc1	86	80.135	ENSRBIG00000028457	DKC1	74	80.135	Rhinopithecus_bieti
ENSMZEG00005014503	dkc1	86	80.135	ENSRROG00000044780	DKC1	86	80.499	Rhinopithecus_roxellana
ENSMZEG00005014503	dkc1	77	71.540	YLR175W	-	87	67.780	Saccharomyces_cerevisiae
ENSMZEG00005014503	dkc1	86	80.726	ENSSBOG00000033746	DKC1	85	80.726	Saimiri_boliviensis_boliviensis
ENSMZEG00005014503	dkc1	80	86.284	ENSSHAG00000002463	DKC1	85	86.284	Sarcophilus_harrisii
ENSMZEG00005014503	dkc1	90	84.783	ENSSFOG00015009585	dkc1	97	81.489	Scleropages_formosus
ENSMZEG00005014503	dkc1	89	88.641	ENSSMAG00000002552	dkc1	93	86.920	Scophthalmus_maximus
ENSMZEG00005014503	dkc1	99	89.022	ENSSDUG00000009963	dkc1	99	88.867	Seriola_dumerili
ENSMZEG00005014503	dkc1	91	88.158	ENSSLDG00000019342	dkc1	95	87.526	Seriola_lalandi_dorsalis
ENSMZEG00005014503	dkc1	86	78.281	ENSSARG00000001822	DKC1	88	78.733	Sorex_araneus
ENSMZEG00005014503	dkc1	80	85.464	ENSSPUG00000018907	DKC1	86	78.936	Sphenodon_punctatus
ENSMZEG00005014503	dkc1	94	87.292	ENSSPAG00000002585	dkc1	93	87.321	Stegastes_partitus
ENSMZEG00005014503	dkc1	95	76.371	ENSSSCG00000012823	DKC1	88	82.660	Sus_scrofa
ENSMZEG00005014503	dkc1	78	86.398	ENSTGUG00000006781	DKC1	95	81.549	Taeniopygia_guttata
ENSMZEG00005014503	dkc1	97	85.421	ENSTRUG00000004413	dkc1	97	84.600	Takifugu_rubripes
ENSMZEG00005014503	dkc1	90	71.336	ENSTNIG00000002582	dkc1	90	71.429	Tetraodon_nigroviridis
ENSMZEG00005014503	dkc1	57	80.333	ENSTBEG00000011262	DKC1	86	78.413	Tupaia_belangeri
ENSMZEG00005014503	dkc1	55	87.004	ENSTTRG00000008089	DKC1	55	87.004	Tursiops_truncatus
ENSMZEG00005014503	dkc1	92	78.091	ENSUAMG00000022721	DKC1	88	83.732	Ursus_americanus
ENSMZEG00005014503	dkc1	92	77.657	ENSUMAG00000016899	DKC1	97	85.176	Ursus_maritimus
ENSMZEG00005014503	dkc1	90	64.444	ENSVVUG00000021671	-	78	67.916	Vulpes_vulpes
ENSMZEG00005014503	dkc1	84	81.163	ENSVVUG00000020734	-	73	81.163	Vulpes_vulpes
ENSMZEG00005014503	dkc1	94	79.915	ENSXETG00000032517	DKC1	89	83.184	Xenopus_tropicalis
ENSMZEG00005014503	dkc1	87	90.138	ENSXCOG00000005498	dkc1	99	88.412	Xiphophorus_couchianus
ENSMZEG00005014503	dkc1	90	90.708	ENSXMAG00000004919	dkc1	97	89.256	Xiphophorus_maculatus