EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005014728 (Gene tree)
Gene ID: 101472982
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 9551 bases
Position: chrLG11:16267615-16277165
Accession: 101472982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005019633	cwf18	PF08315.12	3.7e-39	1	1
ENSMZEP00005019623	cwf18	PF08315.12	1.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005020252	-	2429	XM_004541435	ENSMZEP00005019623	163 (aa)	XP_004541492	UPI00022B4B12
ENSMZET00005020262	-	480	-	ENSMZEP00005019633	159 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005014728's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005014728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005014728	ccdc12	98	69.753	ENSG00000160799	CCDC12	96	69.753	Homo_sapiens
ENSMZEG00005014728	ccdc12	100	91.411	ENSAPOG00000014426	ccdc12	60	91.411	Acanthochromis_polyacanthus
ENSMZEG00005014728	ccdc12	98	71.605	ENSAMEG00000012658	CCDC12	96	71.605	Ailuropoda_melanoleuca
ENSMZEG00005014728	ccdc12	69	97.321	ENSACIG00000015192	ccdc12	80	97.321	Amphilophus_citrinellus
ENSMZEG00005014728	ccdc12	74	95.868	ENSACIG00000022676	-	86	95.868	Amphilophus_citrinellus
ENSMZEG00005014728	ccdc12	98	91.824	ENSAOCG00000024127	ccdc12	95	91.824	Amphiprion_ocellaris
ENSMZEG00005014728	ccdc12	100	91.411	ENSAPEG00000009155	ccdc12	86	91.411	Amphiprion_percula
ENSMZEG00005014728	ccdc12	82	91.791	ENSATEG00000004807	ccdc12	100	91.791	Anabas_testudineus
ENSMZEG00005014728	ccdc12	79	73.077	ENSAPLG00000005482	CCDC12	95	73.077	Anas_platyrhynchos
ENSMZEG00005014728	ccdc12	100	71.856	ENSACAG00000004727	CCDC12	86	71.856	Anolis_carolinensis
ENSMZEG00005014728	ccdc12	82	70.896	ENSANAG00000024483	CCDC12	100	70.896	Aotus_nancymaae
ENSMZEG00005014728	ccdc12	95	86.452	ENSACLG00000012742	-	96	86.452	Astatotilapia_calliptera
ENSMZEG00005014728	ccdc12	100	100.000	ENSACLG00000005356	ccdc12	100	100.000	Astatotilapia_calliptera
ENSMZEG00005014728	ccdc12	100	81.595	ENSAMXG00000016319	ccdc12	100	81.595	Astyanax_mexicanus
ENSMZEG00005014728	ccdc12	98	64.815	ENSBTAG00000011311	CCDC12	96	70.732	Bos_taurus
ENSMZEG00005014728	ccdc12	83	42.143	WBGene00022092	Y69A2AR.21	86	40.764	Caenorhabditis_elegans
ENSMZEG00005014728	ccdc12	98	70.370	ENSCJAG00000002280	CCDC12	96	70.370	Callithrix_jacchus
ENSMZEG00005014728	ccdc12	98	71.605	ENSCAFG00000013588	CCDC12	96	71.605	Canis_familiaris
ENSMZEG00005014728	ccdc12	98	71.605	ENSCAFG00020014024	CCDC12	89	71.605	Canis_lupus_dingo
ENSMZEG00005014728	ccdc12	98	64.815	ENSCHIG00000014512	CCDC12	96	70.732	Capra_hircus
ENSMZEG00005014728	ccdc12	98	70.370	ENSTSYG00000032837	CCDC12	96	70.370	Carlito_syrichta
ENSMZEG00005014728	ccdc12	98	71.605	ENSCPOG00000032515	CCDC12	96	71.605	Cavia_porcellus
ENSMZEG00005014728	ccdc12	98	70.370	ENSCCAG00000020126	CCDC12	89	70.370	Cebus_capucinus
ENSMZEG00005014728	ccdc12	98	59.877	ENSCATG00000033681	CCDC12	89	59.877	Cercocebus_atys
ENSMZEG00005014728	ccdc12	98	72.050	ENSCLAG00000016013	CCDC12	96	71.605	Chinchilla_lanigera
ENSMZEG00005014728	ccdc12	98	69.753	ENSCSAG00000016154	CCDC12	89	69.753	Chlorocebus_sabaeus
ENSMZEG00005014728	ccdc12	98	73.292	ENSCPBG00000015804	CCDC12	77	73.292	Chrysemys_picta_bellii
ENSMZEG00005014728	ccdc12	94	51.613	ENSCING00000005261	-	90	51.613	Ciona_intestinalis
ENSMZEG00005014728	ccdc12	98	69.753	ENSCANG00000020857	CCDC12	89	69.753	Colobus_angolensis_palliatus
ENSMZEG00005014728	ccdc12	98	70.988	ENSCGRG00001000459	Ccdc12	96	70.988	Cricetulus_griseus_chok1gshd
ENSMZEG00005014728	ccdc12	98	70.988	ENSCGRG00000012816	Ccdc12	96	70.988	Cricetulus_griseus_crigri
ENSMZEG00005014728	ccdc12	100	88.344	ENSCSEG00000004543	ccdc12	100	88.344	Cynoglossus_semilaevis
ENSMZEG00005014728	ccdc12	82	91.045	ENSCVAG00000011342	ccdc12	100	91.045	Cyprinodon_variegatus
ENSMZEG00005014728	ccdc12	100	81.595	ENSDARG00000023003	ccdc12	100	81.595	Danio_rerio
ENSMZEG00005014728	ccdc12	88	73.103	ENSDORG00000016567	-	96	72.050	Dipodomys_ordii
ENSMZEG00005014728	ccdc12	98	64.596	ENSDORG00000024399	-	96	64.596	Dipodomys_ordii
ENSMZEG00005014728	ccdc12	97	44.872	FBgn0039732	CG15525	91	44.872	Drosophila_melanogaster
ENSMZEG00005014728	ccdc12	66	67.890	ENSETEG00000000030	CCDC12	95	67.890	Echinops_telfairi
ENSMZEG00005014728	ccdc12	100	59.146	ENSEBUG00000005674	ccdc12	100	60.366	Eptatretus_burgeri
ENSMZEG00005014728	ccdc12	98	70.988	ENSEASG00005008148	-	66	70.988	Equus_asinus_asinus
ENSMZEG00005014728	ccdc12	98	65.432	ENSECAG00000008649	CCDC12	96	65.432	Equus_caballus
ENSMZEG00005014728	ccdc12	100	84.242	ENSELUG00000024105	ccdc12	100	84.242	Esox_lucius
ENSMZEG00005014728	ccdc12	98	70.988	ENSFCAG00000015474	CCDC12	96	70.988	Felis_catus
ENSMZEG00005014728	ccdc12	96	62.893	ENSFALG00000001895	CCDC12	98	62.893	Ficedula_albicollis
ENSMZEG00005014728	ccdc12	98	71.605	ENSFDAG00000002549	CCDC12	97	71.605	Fukomys_damarensis
ENSMZEG00005014728	ccdc12	100	90.184	ENSFHEG00000016247	ccdc12	93	90.184	Fundulus_heteroclitus
ENSMZEG00005014728	ccdc12	100	73.620	ENSGMOG00000016901	ccdc12	100	73.620	Gadus_morhua
ENSMZEG00005014728	ccdc12	100	89.571	ENSGAFG00000006762	ccdc12	100	89.571	Gambusia_affinis
ENSMZEG00005014728	ccdc12	100	86.503	ENSGACG00000008629	ccdc12	100	86.503	Gasterosteus_aculeatus
ENSMZEG00005014728	ccdc12	98	73.292	ENSGAGG00000019688	CCDC12	95	73.292	Gopherus_agassizii
ENSMZEG00005014728	ccdc12	98	69.753	ENSGGOG00000009012	CCDC12	89	69.753	Gorilla_gorilla
ENSMZEG00005014728	ccdc12	100	99.387	ENSHBUG00000016447	ccdc12	100	99.387	Haplochromis_burtoni
ENSMZEG00005014728	ccdc12	98	71.605	ENSHGLG00000014058	CCDC12	96	71.605	Heterocephalus_glaber_female
ENSMZEG00005014728	ccdc12	98	71.605	ENSHGLG00100005918	CCDC12	96	71.605	Heterocephalus_glaber_male
ENSMZEG00005014728	ccdc12	100	85.976	ENSHCOG00000015164	ccdc12	100	85.976	Hippocampus_comes
ENSMZEG00005014728	ccdc12	99	77.160	ENSIPUG00000001310	Ccdc12	99	77.160	Ictalurus_punctatus
ENSMZEG00005014728	ccdc12	98	72.222	ENSSTOG00000003085	CCDC12	96	72.222	Ictidomys_tridecemlineatus
ENSMZEG00005014728	ccdc12	98	70.370	ENSJJAG00000014918	Ccdc12	96	70.370	Jaculus_jaculus
ENSMZEG00005014728	ccdc12	100	83.636	ENSKMAG00000013891	ccdc12	100	83.636	Kryptolebias_marmoratus
ENSMZEG00005014728	ccdc12	99	90.123	ENSLBEG00000024714	ccdc12	86	90.123	Labrus_bergylta
ENSMZEG00005014728	ccdc12	100	80.982	ENSLOCG00000005683	ccdc12	92	80.982	Lepisosteus_oculatus
ENSMZEG00005014728	ccdc12	98	67.702	ENSLAFG00000027745	-	98	67.702	Loxodonta_africana
ENSMZEG00005014728	ccdc12	69	78.378	ENSLAFG00000022573	-	98	78.571	Loxodonta_africana
ENSMZEG00005014728	ccdc12	98	69.753	ENSMFAG00000002976	CCDC12	89	69.753	Macaca_fascicularis
ENSMZEG00005014728	ccdc12	98	69.753	ENSMMUG00000019810	CCDC12	89	69.753	Macaca_mulatta
ENSMZEG00005014728	ccdc12	98	69.753	ENSMNEG00000035785	CCDC12	89	69.753	Macaca_nemestrina
ENSMZEG00005014728	ccdc12	98	69.753	ENSMLEG00000038060	CCDC12	89	69.753	Mandrillus_leucophaeus
ENSMZEG00005014728	ccdc12	100	90.184	ENSMAMG00000012165	ccdc12	100	90.184	Mastacembelus_armatus
ENSMZEG00005014728	ccdc12	95	86.452	ENSMZEG00005019013	-	96	86.452	Maylandia_zebra
ENSMZEG00005014728	ccdc12	86	68.794	ENSMGAG00000002815	CCDC12	92	66.871	Meleagris_gallopavo
ENSMZEG00005014728	ccdc12	98	70.370	ENSMAUG00000008879	Ccdc12	96	70.370	Mesocricetus_auratus
ENSMZEG00005014728	ccdc12	98	70.370	ENSMICG00000032886	CCDC12	96	69.939	Microcebus_murinus
ENSMZEG00005014728	ccdc12	98	71.605	ENSMOCG00000004483	Ccdc12	96	71.605	Microtus_ochrogaster
ENSMZEG00005014728	ccdc12	81	79.688	ENSMMOG00000001860	ccdc12	88	79.688	Mola_mola
ENSMZEG00005014728	ccdc12	98	72.840	ENSMODG00000013967	-	96	72.393	Monodelphis_domestica
ENSMZEG00005014728	ccdc12	98	64.815	ENSMODG00000025021	-	96	64.815	Monodelphis_domestica
ENSMZEG00005014728	ccdc12	98	62.963	ENSMODG00000022615	-	96	62.963	Monodelphis_domestica
ENSMZEG00005014728	ccdc12	100	89.571	ENSMALG00000011850	ccdc12	100	89.571	Monopterus_albus
ENSMZEG00005014728	ccdc12	98	70.988	MGP_CAROLIEiJ_G0032737	-	96	70.988	Mus_caroli
ENSMZEG00005014728	ccdc12	98	70.370	ENSMUSG00000019659	Ccdc12	96	70.370	Mus_musculus
ENSMZEG00005014728	ccdc12	98	70.988	MGP_PahariEiJ_G0015604	Ccdc12	96	70.988	Mus_pahari
ENSMZEG00005014728	ccdc12	98	70.370	MGP_SPRETEiJ_G0033885	Ccdc12	96	70.370	Mus_spretus
ENSMZEG00005014728	ccdc12	98	67.702	ENSMLUG00000009547	CCDC12	96	67.702	Myotis_lucifugus
ENSMZEG00005014728	ccdc12	98	70.988	ENSNGAG00000004149	Ccdc12	96	70.988	Nannospalax_galili
ENSMZEG00005014728	ccdc12	100	99.371	ENSNBRG00000015275	ccdc12	100	99.371	Neolamprologus_brichardi
ENSMZEG00005014728	ccdc12	98	70.370	ENSNLEG00000006219	CCDC12	96	70.370	Nomascus_leucogenys
ENSMZEG00005014728	ccdc12	93	69.281	ENSOPRG00000005086	CCDC12	91	69.281	Ochotona_princeps
ENSMZEG00005014728	ccdc12	98	72.050	ENSODEG00000012202	CCDC12	96	71.605	Octodon_degus
ENSMZEG00005014728	ccdc12	100	100.000	ENSONIG00000003061	ccdc12	100	100.000	Oreochromis_niloticus
ENSMZEG00005014728	ccdc12	81	72.180	ENSOANG00000004263	-	100	72.180	Ornithorhynchus_anatinus
ENSMZEG00005014728	ccdc12	98	70.988	ENSOCUG00000012431	CCDC12	82	70.988	Oryctolagus_cuniculus
ENSMZEG00005014728	ccdc12	100	85.455	ENSORLG00000008126	ccdc12	100	85.455	Oryzias_latipes
ENSMZEG00005014728	ccdc12	100	88.344	ENSORLG00020013927	ccdc12	100	88.344	Oryzias_latipes_hni
ENSMZEG00005014728	ccdc12	100	88.344	ENSORLG00015020115	ccdc12	100	88.344	Oryzias_latipes_hsok
ENSMZEG00005014728	ccdc12	100	89.571	ENSOMEG00000022304	ccdc12	100	89.571	Oryzias_melastigma
ENSMZEG00005014728	ccdc12	100	89.571	ENSOMEG00000014082	ccdc12	100	89.571	Oryzias_melastigma
ENSMZEG00005014728	ccdc12	69	74.775	ENSOGAG00000016807	CCDC12	100	75.000	Otolemur_garnettii
ENSMZEG00005014728	ccdc12	82	70.588	ENSOARG00000006426	CCDC12	100	70.803	Ovis_aries
ENSMZEG00005014728	ccdc12	98	69.753	ENSPPAG00000028782	CCDC12	89	69.753	Pan_paniscus
ENSMZEG00005014728	ccdc12	98	70.988	ENSPPRG00000013547	CCDC12	96	70.988	Panthera_pardus
ENSMZEG00005014728	ccdc12	98	70.988	ENSPTIG00000014875	CCDC12	92	70.988	Panthera_tigris_altaica
ENSMZEG00005014728	ccdc12	98	69.753	ENSPTRG00000014862	CCDC12	89	69.753	Pan_troglodytes
ENSMZEG00005014728	ccdc12	98	69.753	ENSPANG00000017485	CCDC12	91	69.753	Papio_anubis
ENSMZEG00005014728	ccdc12	100	73.780	ENSPKIG00000019130	ccdc12	100	75.610	Paramormyrops_kingsleyae
ENSMZEG00005014728	ccdc12	69	85.455	ENSPSIG00000010867	CCDC12	100	85.586	Pelodiscus_sinensis
ENSMZEG00005014728	ccdc12	100	88.957	ENSPMGG00000012211	ccdc12	100	88.957	Periophthalmus_magnuspinnatus
ENSMZEG00005014728	ccdc12	99	55.828	ENSPEMG00000001376	-	97	55.828	Peromyscus_maniculatus_bairdii
ENSMZEG00005014728	ccdc12	98	70.988	ENSPEMG00000022196	-	96	70.988	Peromyscus_maniculatus_bairdii
ENSMZEG00005014728	ccdc12	96	72.611	ENSPMAG00000000005	ccdc12	92	72.611	Petromyzon_marinus
ENSMZEG00005014728	ccdc12	98	73.292	ENSPCIG00000025941	CCDC12	96	73.292	Phascolarctos_cinereus
ENSMZEG00005014728	ccdc12	100	90.184	ENSPFOG00000000343	ccdc12	100	90.184	Poecilia_formosa
ENSMZEG00005014728	ccdc12	100	89.571	ENSPLAG00000019010	ccdc12	100	89.571	Poecilia_latipinna
ENSMZEG00005014728	ccdc12	88	92.308	ENSPMEG00000022371	ccdc12	81	90.184	Poecilia_mexicana
ENSMZEG00005014728	ccdc12	100	90.184	ENSPREG00000020932	ccdc12	81	90.184	Poecilia_reticulata
ENSMZEG00005014728	ccdc12	98	70.370	ENSPPYG00000013924	CCDC12	79	70.370	Pongo_abelii
ENSMZEG00005014728	ccdc12	98	71.605	ENSPCAG00000005800	CCDC12	96	71.605	Procavia_capensis
ENSMZEG00005014728	ccdc12	98	69.939	ENSPCOG00000018682	CCDC12	89	69.939	Propithecus_coquereli
ENSMZEG00005014728	ccdc12	98	70.988	ENSPVAG00000004204	CCDC12	96	70.988	Pteropus_vampyrus
ENSMZEG00005014728	ccdc12	100	100.000	ENSPNYG00000016295	ccdc12	100	100.000	Pundamilia_nyererei
ENSMZEG00005014728	ccdc12	100	65.244	ENSPNAG00000028558	ccdc12	90	88.393	Pygocentrus_nattereri
ENSMZEG00005014728	ccdc12	98	70.988	ENSRNOG00000020946	Ccdc12	96	70.988	Rattus_norvegicus
ENSMZEG00005014728	ccdc12	98	69.753	ENSRBIG00000039910	CCDC12	89	69.753	Rhinopithecus_bieti
ENSMZEG00005014728	ccdc12	98	69.753	ENSRROG00000039721	CCDC12	96	69.753	Rhinopithecus_roxellana
ENSMZEG00005014728	ccdc12	98	70.370	ENSSBOG00000035443	CCDC12	89	70.370	Saimiri_boliviensis_boliviensis
ENSMZEG00005014728	ccdc12	98	72.500	ENSSHAG00000003265	-	96	72.500	Sarcophilus_harrisii
ENSMZEG00005014728	ccdc12	100	75.610	ENSSFOG00015001307	ccdc12	100	75.610	Scleropages_formosus
ENSMZEG00005014728	ccdc12	91	90.541	ENSSMAG00000019856	ccdc12	100	88.415	Scophthalmus_maximus
ENSMZEG00005014728	ccdc12	100	87.730	ENSSDUG00000006549	ccdc12	100	87.730	Seriola_dumerili
ENSMZEG00005014728	ccdc12	100	90.798	ENSSLDG00000015956	ccdc12	100	90.798	Seriola_lalandi_dorsalis
ENSMZEG00005014728	ccdc12	90	51.701	ENSSPUG00000013054	CCDC12	91	51.701	Sphenodon_punctatus
ENSMZEG00005014728	ccdc12	100	89.571	ENSSPAG00000007010	ccdc12	100	89.571	Stegastes_partitus
ENSMZEG00005014728	ccdc12	64	52.475	ENSSSCG00000007882	-	69	52.475	Sus_scrofa
ENSMZEG00005014728	ccdc12	98	70.807	ENSSSCG00000011329	-	96	70.807	Sus_scrofa
ENSMZEG00005014728	ccdc12	66	68.807	ENSTGUG00000000186	CCDC12	86	68.807	Taeniopygia_guttata
ENSMZEG00005014728	ccdc12	100	79.245	ENSTRUG00000014023	ccdc12	85	79.245	Takifugu_rubripes
ENSMZEG00005014728	ccdc12	100	81.595	ENSTNIG00000018407	ccdc12	98	81.595	Tetraodon_nigroviridis
ENSMZEG00005014728	ccdc12	98	49.693	ENSTBEG00000000048	CCDC12	96	49.693	Tupaia_belangeri
ENSMZEG00005014728	ccdc12	98	67.901	ENSTTRG00000015854	CCDC12	96	67.901	Tursiops_truncatus
ENSMZEG00005014728	ccdc12	98	65.432	ENSUAMG00000025548	CCDC12	93	75.000	Ursus_americanus
ENSMZEG00005014728	ccdc12	98	71.605	ENSUMAG00000004346	CCDC12	96	71.605	Ursus_maritimus
ENSMZEG00005014728	ccdc12	66	60.550	ENSVPAG00000000070	-	95	60.550	Vicugna_pacos
ENSMZEG00005014728	ccdc12	98	71.605	ENSVVUG00000004582	CCDC12	96	71.605	Vulpes_vulpes
ENSMZEG00005014728	ccdc12	82	73.881	ENSXETG00000013123	ccdc12	99	73.881	Xenopus_tropicalis
ENSMZEG00005014728	ccdc12	100	88.957	ENSXCOG00000019741	ccdc12	100	88.957	Xiphophorus_couchianus
ENSMZEG00005014728	ccdc12	100	89.571	ENSXMAG00000014098	ccdc12	81	89.571	Xiphophorus_maculatus