EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005014845 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b (1 of many)
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-A
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 4022 bases
Position: chrLG11:16353558-16357579
Accession: 105941297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005019978	RRM_1	PF00076.22	4.2e-27	1	2
ENSMZEP00005019978	RRM_1	PF00076.22	4.2e-27	2	2
ENSMZEP00005019975	RRM_1	PF00076.22	5.3e-27	1	2
ENSMZEP00005019975	RRM_1	PF00076.22	5.3e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005020624	-	1830	-	ENSMZEP00005019978	609 (aa)	-	-
ENSMZET00005020621	-	1893	XM_024804320	ENSMZEP00005019975	630 (aa)	XP_024660088	-

Gene Model

Click here to download ENSMZEG00005014845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005014845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005014845	rbm12b	91	45.946	ENSG00000183808	RBM12B	99	71.605	Homo_sapiens
ENSMZEG00005014845	rbm12b	99	64.455	ENSAPOG00000013963	rbm12b	100	64.780	Acanthochromis_polyacanthus
ENSMZEG00005014845	rbm12b	85	44.595	ENSAMEG00000007134	RBM12B	66	45.455	Ailuropoda_melanoleuca
ENSMZEG00005014845	rbm12b	87	72.537	ENSACIG00000014943	rbm12b	97	78.523	Amphilophus_citrinellus
ENSMZEG00005014845	rbm12b	99	66.193	ENSAOCG00000024270	rbm12b	100	66.509	Amphiprion_ocellaris
ENSMZEG00005014845	rbm12b	99	46.997	ENSAPEG00000022079	rbm12b	100	66.883	Amphiprion_percula
ENSMZEG00005014845	rbm12b	99	62.875	ENSATEG00000004578	rbm12b	99	62.404	Anabas_testudineus
ENSMZEG00005014845	rbm12b	63	50.617	ENSATEG00000001886	zgc:153215	77	48.864	Anabas_testudineus
ENSMZEG00005014845	rbm12b	99	36.111	ENSAPLG00000002020	RBM12B	100	37.768	Anas_platyrhynchos
ENSMZEG00005014845	rbm12b	96	36.879	ENSACAG00000003463	RBM12B	63	38.194	Anolis_carolinensis
ENSMZEG00005014845	rbm12b	89	45.946	ENSANAG00000034015	RBM12B	70	46.753	Aotus_nancymaae
ENSMZEG00005014845	rbm12b	99	94.822	ENSACLG00000005578	rbm12b	100	95.192	Astatotilapia_calliptera
ENSMZEG00005014845	rbm12b	99	93.978	ENSACLG00000005575	rbm12b	98	94.164	Astatotilapia_calliptera
ENSMZEG00005014845	rbm12b	64	55.952	ENSAMXG00000020853	zgc:153215	69	55.952	Astyanax_mexicanus
ENSMZEG00005014845	rbm12b	99	42.989	ENSAMXG00000041973	rbm12b	100	43.405	Astyanax_mexicanus
ENSMZEG00005014845	rbm12b	85	45.946	ENSBTAG00000013408	RBM12B	65	46.753	Bos_taurus
ENSMZEG00005014845	rbm12b	85	44.595	ENSCAFG00000009109	RBM12B	57	45.455	Canis_familiaris
ENSMZEG00005014845	rbm12b	90	44.595	ENSCAFG00020012203	RBM12B	64	45.455	Canis_lupus_dingo
ENSMZEG00005014845	rbm12b	73	37.398	ENSCHIG00000006790	RBM12B	67	37.398	Capra_hircus
ENSMZEG00005014845	rbm12b	91	45.946	ENSTSYG00000012515	RBM12B	61	46.753	Carlito_syrichta
ENSMZEG00005014845	rbm12b	89	47.297	ENSCAPG00000003543	RBM12B	62	48.052	Cavia_aperea
ENSMZEG00005014845	rbm12b	89	47.297	ENSCPOG00000007815	RBM12B	62	48.052	Cavia_porcellus
ENSMZEG00005014845	rbm12b	91	45.946	ENSCATG00000030769	RBM12B	70	46.753	Cercocebus_atys
ENSMZEG00005014845	rbm12b	89	47.297	ENSCLAG00000017617	RBM12B	62	48.052	Chinchilla_lanigera
ENSMZEG00005014845	rbm12b	91	45.946	ENSCSAG00000018559	RBM12B	60	46.753	Chlorocebus_sabaeus
ENSMZEG00005014845	rbm12b	83	42.857	ENSCHOG00000008934	RBM12B	58	42.857	Choloepus_hoffmanni
ENSMZEG00005014845	rbm12b	99	36.506	ENSCPBG00000003061	RBM12B	100	36.634	Chrysemys_picta_bellii
ENSMZEG00005014845	rbm12b	91	45.946	ENSCANG00000030379	RBM12B	69	46.753	Colobus_angolensis_palliatus
ENSMZEG00005014845	rbm12b	85	47.297	ENSCGRG00001008710	-	65	48.052	Cricetulus_griseus_chok1gshd
ENSMZEG00005014845	rbm12b	99	57.078	ENSCSEG00000004610	rbm12b	97	57.078	Cynoglossus_semilaevis
ENSMZEG00005014845	rbm12b	99	56.761	ENSCVAG00000011047	rbm12b	100	56.964	Cyprinodon_variegatus
ENSMZEG00005014845	rbm12b	99	39.972	ENSDARG00000079717	rbm12b	100	40.533	Danio_rerio
ENSMZEG00005014845	rbm12b	85	45.946	ENSDNOG00000041608	RBM12B	56	46.753	Dasypus_novemcinctus
ENSMZEG00005014845	rbm12b	90	45.946	ENSDORG00000024034	-	63	45.946	Dipodomys_ordii
ENSMZEG00005014845	rbm12b	74	37.475	ENSETEG00000013005	-	69	36.434	Echinops_telfairi
ENSMZEG00005014845	rbm12b	85	45.946	ENSEASG00005016297	RBM12B	64	46.753	Equus_asinus_asinus
ENSMZEG00005014845	rbm12b	85	45.946	ENSECAG00000017870	RBM12B	58	46.753	Equus_caballus
ENSMZEG00005014845	rbm12b	85	45.946	ENSFCAG00000029274	RBM12B	65	46.753	Felis_catus
ENSMZEG00005014845	rbm12b	99	34.583	ENSFALG00000014893	RBM12B	100	35.457	Ficedula_albicollis
ENSMZEG00005014845	rbm12b	89	47.297	ENSFDAG00000005576	RBM12B	61	48.052	Fukomys_damarensis
ENSMZEG00005014845	rbm12b	99	57.590	ENSFHEG00000016425	rbm12b	100	57.944	Fundulus_heteroclitus
ENSMZEG00005014845	rbm12b	99	53.239	ENSGMOG00000013467	rbm12b	100	53.228	Gadus_morhua
ENSMZEG00005014845	rbm12b	99	37.090	ENSGALG00000035129	RBM12B	100	37.216	Gallus_gallus
ENSMZEG00005014845	rbm12b	99	62.303	ENSGAFG00000007224	rbm12b	100	62.637	Gambusia_affinis
ENSMZEG00005014845	rbm12b	99	60.250	ENSGACG00000008682	rbm12b	100	60.592	Gasterosteus_aculeatus
ENSMZEG00005014845	rbm12b	99	36.351	ENSGAGG00000009774	RBM12B	100	36.481	Gopherus_agassizii
ENSMZEG00005014845	rbm12b	91	45.946	ENSGGOG00000011909	RBM12B	68	46.753	Gorilla_gorilla
ENSMZEG00005014845	rbm12b	99	88.633	ENSHBUG00000016227	rbm12b	100	88.838	Haplochromis_burtoni
ENSMZEG00005014845	rbm12b	72	46.591	ENSHBUG00000016150	zgc:153215	78	46.591	Haplochromis_burtoni
ENSMZEG00005014845	rbm12b	89	47.297	ENSHGLG00000009063	RBM12B	61	48.052	Heterocephalus_glaber_female
ENSMZEG00005014845	rbm12b	89	47.297	ENSHGLG00100021324	RBM12B	61	48.052	Heterocephalus_glaber_male
ENSMZEG00005014845	rbm12b	99	53.228	ENSHCOG00000014952	rbm12b	100	53.448	Hippocampus_comes
ENSMZEG00005014845	rbm12b	99	43.155	ENSIPUG00000001167	RBM12B	99	43.155	Ictalurus_punctatus
ENSMZEG00005014845	rbm12b	91	47.297	ENSSTOG00000027445	RBM12B	72	48.052	Ictidomys_tridecemlineatus
ENSMZEG00005014845	rbm12b	85	45.946	ENSJJAG00000004165	-	65	46.753	Jaculus_jaculus
ENSMZEG00005014845	rbm12b	99	58.136	ENSKMAG00000013715	rbm12b	100	58.176	Kryptolebias_marmoratus
ENSMZEG00005014845	rbm12b	99	58.452	ENSKMAG00000013704	rbm12b	99	57.143	Kryptolebias_marmoratus
ENSMZEG00005014845	rbm12b	99	37.037	ENSLACG00000007177	RBM12B	100	37.980	Latimeria_chalumnae
ENSMZEG00005014845	rbm12b	99	45.308	ENSLOCG00000018344	rbm12b	100	45.401	Lepisosteus_oculatus
ENSMZEG00005014845	rbm12b	86	42.857	ENSLAFG00000029949	RBM12B	67	43.750	Loxodonta_africana
ENSMZEG00005014845	rbm12b	91	45.946	ENSMFAG00000045430	RBM12B	69	46.753	Macaca_fascicularis
ENSMZEG00005014845	rbm12b	91	45.946	ENSMMUG00000005558	RBM12B	68	46.753	Macaca_mulatta
ENSMZEG00005014845	rbm12b	91	45.946	ENSMNEG00000041292	RBM12B	69	46.753	Macaca_nemestrina
ENSMZEG00005014845	rbm12b	91	45.946	ENSMLEG00000037288	RBM12B	68	46.753	Mandrillus_leucophaeus
ENSMZEG00005014845	rbm12b	72	51.136	ENSMAMG00000012038	zgc:153215	80	51.136	Mastacembelus_armatus
ENSMZEG00005014845	rbm12b	99	63.950	ENSMAMG00000011998	rbm12b	100	64.798	Mastacembelus_armatus
ENSMZEG00005014845	rbm12b	99	94.295	ENSMZEG00005015005	rbm12b	100	94.479	Maylandia_zebra
ENSMZEG00005014845	rbm12b	72	46.591	ENSMZEG00005005435	zgc:153215	78	46.591	Maylandia_zebra
ENSMZEG00005014845	rbm12b	73	39.458	ENSMGAG00000011985	RBM12B	99	39.458	Meleagris_gallopavo
ENSMZEG00005014845	rbm12b	89	47.297	ENSMAUG00000021752	-	70	48.052	Mesocricetus_auratus
ENSMZEG00005014845	rbm12b	91	45.946	ENSMICG00000036969	RBM12B	71	46.753	Microcebus_murinus
ENSMZEG00005014845	rbm12b	85	45.946	ENSMOCG00000005603	-	68	46.753	Microtus_ochrogaster
ENSMZEG00005014845	rbm12b	99	59.683	ENSMMOG00000002404	rbm12b	94	59.874	Mola_mola
ENSMZEG00005014845	rbm12b	85	43.243	ENSMODG00000007436	RBM12B	76	44.156	Monodelphis_domestica
ENSMZEG00005014845	rbm12b	72	30.108	ENSMALG00000001222	zgc:153215	98	30.108	Monopterus_albus
ENSMZEG00005014845	rbm12b	99	61.224	ENSMALG00000012059	rbm12b	100	61.562	Monopterus_albus
ENSMZEG00005014845	rbm12b	85	50.000	ENSMUSG00000046667	Rbm12b1	67	50.667	Mus_musculus
ENSMZEG00005014845	rbm12b	85	48.611	ENSMUSG00000052137	Rbm12b2	67	49.333	Mus_musculus
ENSMZEG00005014845	rbm12b	94	37.778	MGP_SPRETEiJ_G0026765	-	67	38.406	Mus_spretus
ENSMZEG00005014845	rbm12b	94	37.778	MGP_SPRETEiJ_G0026766	-	73	38.406	Mus_spretus
ENSMZEG00005014845	rbm12b	85	45.946	ENSMPUG00000018637	RBM12B	56	46.753	Mustela_putorius_furo
ENSMZEG00005014845	rbm12b	85	43.243	ENSMLUG00000002359	RBM12B	59	44.156	Myotis_lucifugus
ENSMZEG00005014845	rbm12b	90	44.595	ENSNGAG00000002801	-	64	45.455	Nannospalax_galili
ENSMZEG00005014845	rbm12b	99	92.710	ENSNBRG00000015057	rbm12b	100	92.902	Neolamprologus_brichardi
ENSMZEG00005014845	rbm12b	70	45.455	ENSNBRG00000013644	zgc:153215	76	45.455	Neolamprologus_brichardi
ENSMZEG00005014845	rbm12b	91	45.946	ENSNLEG00000032050	RBM12B	68	46.753	Nomascus_leucogenys
ENSMZEG00005014845	rbm12b	89	47.297	ENSODEG00000019204	RBM12B	62	48.052	Octodon_degus
ENSMZEG00005014845	rbm12b	99	90.333	ENSONIG00000020612	rbm12b	100	90.536	Oreochromis_niloticus
ENSMZEG00005014845	rbm12b	99	35.890	ENSOANG00000015735	-	98	36.963	Ornithorhynchus_anatinus
ENSMZEG00005014845	rbm12b	85	45.946	ENSOCUG00000010353	RBM12B	65	46.753	Oryctolagus_cuniculus
ENSMZEG00005014845	rbm12b	99	60.220	ENSORLG00000008228	rbm12b	99	59.571	Oryzias_latipes
ENSMZEG00005014845	rbm12b	99	60.692	ENSORLG00020013619	rbm12b	99	60.031	Oryzias_latipes_hni
ENSMZEG00005014845	rbm12b	99	60.535	ENSORLG00015019999	rbm12b	99	59.877	Oryzias_latipes_hsok
ENSMZEG00005014845	rbm12b	99	61.635	ENSOMEG00000022523	rbm12b	99	60.949	Oryzias_melastigma
ENSMZEG00005014845	rbm12b	99	45.946	ENSOGAG00000002979	RBM12B	66	46.753	Otolemur_garnettii
ENSMZEG00005014845	rbm12b	99	45.946	ENSPTIG00000020071	RBM12B	77	46.753	Panthera_tigris_altaica
ENSMZEG00005014845	rbm12b	91	45.946	ENSPTRG00000020420	RBM12B	68	46.753	Pan_troglodytes
ENSMZEG00005014845	rbm12b	91	45.946	ENSPANG00000035535	RBM12B	68	46.753	Papio_anubis
ENSMZEG00005014845	rbm12b	72	32.353	ENSPKIG00000014851	zgc:153215	99	32.353	Paramormyrops_kingsleyae
ENSMZEG00005014845	rbm12b	99	47.352	ENSPKIG00000018719	rbm12b	99	47.669	Paramormyrops_kingsleyae
ENSMZEG00005014845	rbm12b	99	36.131	ENSPSIG00000001348	RBM12B	100	36.261	Pelodiscus_sinensis
ENSMZEG00005014845	rbm12b	50	49.846	ENSPMGG00000012348	-	97	49.846	Periophthalmus_magnuspinnatus
ENSMZEG00005014845	rbm12b	85	47.297	ENSPEMG00000008279	-	67	48.052	Peromyscus_maniculatus_bairdii
ENSMZEG00005014845	rbm12b	85	43.243	ENSPCIG00000008556	RBM12B	78	44.156	Phascolarctos_cinereus
ENSMZEG00005014845	rbm12b	99	61.295	ENSPFOG00000020937	rbm12b	97	61.599	Poecilia_formosa
ENSMZEG00005014845	rbm12b	72	41.429	ENSPFOG00000017451	zgc:153215	77	41.429	Poecilia_formosa
ENSMZEG00005014845	rbm12b	99	61.987	ENSPLAG00000018782	rbm12b	100	62.323	Poecilia_latipinna
ENSMZEG00005014845	rbm12b	99	62.461	ENSPMEG00000011418	rbm12b	100	62.794	Poecilia_mexicana
ENSMZEG00005014845	rbm12b	99	61.672	ENSPREG00000020770	rbm12b	100	62.009	Poecilia_reticulata
ENSMZEG00005014845	rbm12b	85	45.946	ENSPPYG00000018745	RBM12B	56	46.753	Pongo_abelii
ENSMZEG00005014845	rbm12b	85	44.595	ENSPCOG00000023546	RBM12B	65	45.455	Propithecus_coquereli
ENSMZEG00005014845	rbm12b	85	45.946	ENSPVAG00000011803	RBM12B	61	46.753	Pteropus_vampyrus
ENSMZEG00005014845	rbm12b	99	93.344	ENSPNYG00000016696	rbm12b	100	93.533	Pundamilia_nyererei
ENSMZEG00005014845	rbm12b	66	53.125	ENSPNAG00000025628	zgc:153215	77	53.125	Pygocentrus_nattereri
ENSMZEG00005014845	rbm12b	99	43.517	ENSPNAG00000008126	rbm12b	98	44.122	Pygocentrus_nattereri
ENSMZEG00005014845	rbm12b	85	48.611	ENSRNOG00000016330	Rbm12b	67	49.333	Rattus_norvegicus
ENSMZEG00005014845	rbm12b	73	37.398	ENSRNOG00000055292	LOC679087	65	37.398	Rattus_norvegicus
ENSMZEG00005014845	rbm12b	91	45.946	ENSRBIG00000035046	RBM12B	68	46.753	Rhinopithecus_bieti
ENSMZEG00005014845	rbm12b	91	45.946	ENSRROG00000023660	RBM12B	71	46.753	Rhinopithecus_roxellana
ENSMZEG00005014845	rbm12b	91	45.946	ENSSBOG00000027592	RBM12B	68	46.753	Saimiri_boliviensis_boliviensis
ENSMZEG00005014845	rbm12b	85	43.243	ENSSHAG00000015335	RBM12B	78	44.156	Sarcophilus_harrisii
ENSMZEG00005014845	rbm12b	99	46.736	ENSSFOG00015001584	rbm12b	100	47.415	Scleropages_formosus
ENSMZEG00005014845	rbm12b	72	32.742	ENSSFOG00015009427	zgc:153215	99	32.742	Scleropages_formosus
ENSMZEG00005014845	rbm12b	99	63.937	ENSSMAG00000019708	rbm12b	100	63.950	Scophthalmus_maximus
ENSMZEG00005014845	rbm12b	99	65.284	ENSSDUG00000006856	rbm12b	100	65.443	Seriola_dumerili
ENSMZEG00005014845	rbm12b	72	53.086	ENSSLDG00000013581	zgc:153215	77	51.136	Seriola_lalandi_dorsalis
ENSMZEG00005014845	rbm12b	99	65.591	ENSSLDG00000016156	rbm12b	100	65.749	Seriola_lalandi_dorsalis
ENSMZEG00005014845	rbm12b	74	37.525	ENSSARG00000011845	-	67	37.525	Sorex_araneus
ENSMZEG00005014845	rbm12b	74	36.000	ENSSPUG00000016954	RBM12B	92	36.381	Sphenodon_punctatus
ENSMZEG00005014845	rbm12b	99	66.246	ENSSPAG00000006774	rbm12b	100	66.509	Stegastes_partitus
ENSMZEG00005014845	rbm12b	85	44.444	ENSSSCG00000006110	RBM12B	57	45.333	Sus_scrofa
ENSMZEG00005014845	rbm12b	73	38.340	ENSTGUG00000011860	RBM12B	96	38.340	Taeniopygia_guttata
ENSMZEG00005014845	rbm12b	99	54.905	ENSTRUG00000013738	rbm12b	100	55.276	Takifugu_rubripes
ENSMZEG00005014845	rbm12b	77	35.907	ENSTBEG00000000449	RBM12B	66	35.907	Tupaia_belangeri
ENSMZEG00005014845	rbm12b	85	45.946	ENSUAMG00000023639	RBM12B	64	46.753	Ursus_americanus
ENSMZEG00005014845	rbm12b	85	45.946	ENSUMAG00000016008	RBM12B	61	46.753	Ursus_maritimus
ENSMZEG00005014845	rbm12b	90	44.595	ENSVVUG00000002694	RBM12B	68	45.455	Vulpes_vulpes
ENSMZEG00005014845	rbm12b	82	30.224	ENSXETG00000014696	rbm12b	75	30.224	Xenopus_tropicalis
ENSMZEG00005014845	rbm12b	99	34.661	ENSXETG00000014694	rbm12b	100	36.646	Xenopus_tropicalis
ENSMZEG00005014845	rbm12b	99	62.145	ENSXMAG00000014213	rbm12b	100	62.480	Xiphophorus_maculatus