EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005015073 (Gene tree)
Gene ID: 101478280
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 14417 bases
Position: chrLG14:17447406-17461822
Accession: 101478280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005020112	RRM_4	PF10598.9	3.5e-48	1	1
ENSMZEP00005020112	U5_2-snRNA_bdg	PF10597.9	8.6e-74	1	1
ENSMZEP00005020112	PRO8NT	PF08082.11	2.1e-87	1	1
ENSMZEP00005020112	U6-snRNA_bdg	PF10596.9	2.1e-89	1	1
ENSMZEP00005020112	PROCN	PF08083.11	5.7e-236	1	1
ENSMZEP00005020112	PRP8_domainIV	PF12134.8	5e-130	1	1
ENSMZEP00005020112	PROCT	PF08084.11	3.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005020759	-	7053	XM_014407367	ENSMZEP00005020112	2350 (aa)	XP_014262853	UPI0006CEDB34

Gene Model

Click here to download ENSMZEG00005015073's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005015073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005015073	prpf8	100	97.447	ENSG00000174231	PRPF8	100	97.447	Homo_sapiens
ENSMZEG00005015073	prpf8	100	98.979	ENSAPOG00000010079	prpf8	100	98.979	Acanthochromis_polyacanthus
ENSMZEG00005015073	prpf8	100	97.447	ENSAMEG00000007940	PRPF8	100	97.447	Ailuropoda_melanoleuca
ENSMZEG00005015073	prpf8	100	98.174	ENSACIG00000018280	prpf8	100	98.174	Amphilophus_citrinellus
ENSMZEG00005015073	prpf8	100	98.936	ENSAOCG00000010725	prpf8	100	98.936	Amphiprion_ocellaris
ENSMZEG00005015073	prpf8	100	98.936	ENSAPEG00000014397	prpf8	100	98.936	Amphiprion_percula
ENSMZEG00005015073	prpf8	100	98.255	ENSATEG00000010062	prpf8	100	98.255	Anabas_testudineus
ENSMZEG00005015073	prpf8	96	98.176	ENSAPLG00000010357	PRPF8	100	98.176	Anas_platyrhynchos
ENSMZEG00005015073	prpf8	82	96.142	ENSACAG00000014784	PRPF8	100	96.142	Anolis_carolinensis
ENSMZEG00005015073	prpf8	100	97.447	ENSANAG00000032629	PRPF8	100	97.447	Aotus_nancymaae
ENSMZEG00005015073	prpf8	100	100.000	ENSACLG00000020858	prpf8	100	100.000	Astatotilapia_calliptera
ENSMZEG00005015073	prpf8	100	98.340	ENSAMXG00000020291	prpf8	100	98.340	Astyanax_mexicanus
ENSMZEG00005015073	prpf8	100	97.447	ENSBTAG00000011488	PRPF8	100	97.447	Bos_taurus
ENSMZEG00005015073	prpf8	99	86.489	WBGene00004187	prp-8	99	86.938	Caenorhabditis_elegans
ENSMZEG00005015073	prpf8	100	97.447	ENSCJAG00000001911	PRPF8	100	97.447	Callithrix_jacchus
ENSMZEG00005015073	prpf8	100	97.447	ENSCAFG00000019221	PRPF8	100	97.447	Canis_familiaris
ENSMZEG00005015073	prpf8	95	98.304	ENSCAFG00020009943	PRPF8	100	98.304	Canis_lupus_dingo
ENSMZEG00005015073	prpf8	100	97.447	ENSCHIG00000017499	PRPF8	100	97.447	Capra_hircus
ENSMZEG00005015073	prpf8	100	97.447	ENSTSYG00000014120	PRPF8	100	97.447	Carlito_syrichta
ENSMZEG00005015073	prpf8	96	96.080	ENSCAPG00000009459	PRPF8	99	96.080	Cavia_aperea
ENSMZEG00005015073	prpf8	100	97.447	ENSCPOG00000010379	PRPF8	100	97.447	Cavia_porcellus
ENSMZEG00005015073	prpf8	100	97.447	ENSCCAG00000031983	-	100	97.447	Cebus_capucinus
ENSMZEG00005015073	prpf8	100	97.447	ENSCATG00000038595	PRPF8	100	97.447	Cercocebus_atys
ENSMZEG00005015073	prpf8	100	97.447	ENSCLAG00000004388	PRPF8	100	97.447	Chinchilla_lanigera
ENSMZEG00005015073	prpf8	100	97.447	ENSCSAG00000013929	PRPF8	100	97.447	Chlorocebus_sabaeus
ENSMZEG00005015073	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSMZEG00005015073	prpf8	100	97.362	ENSCPBG00000020409	PRPF8	100	97.362	Chrysemys_picta_bellii
ENSMZEG00005015073	prpf8	98	92.993	ENSCSAVG00000007825	-	100	91.323	Ciona_savignyi
ENSMZEG00005015073	prpf8	100	97.447	ENSCANG00000043088	PRPF8	100	97.447	Colobus_angolensis_palliatus
ENSMZEG00005015073	prpf8	73	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSMZEG00005015073	prpf8	100	98.553	ENSCSEG00000007905	prpf8	100	98.553	Cynoglossus_semilaevis
ENSMZEG00005015073	prpf8	100	98.553	ENSDARG00000026180	prpf8	100	98.553	Danio_rerio
ENSMZEG00005015073	prpf8	93	97.531	ENSDNOG00000018471	PRPF8	99	97.531	Dasypus_novemcinctus
ENSMZEG00005015073	prpf8	84	95.997	ENSDORG00000006185	Prpf8	96	95.997	Dipodomys_ordii
ENSMZEG00005015073	prpf8	99	91.396	FBgn0033688	Prp8	97	91.922	Drosophila_melanogaster
ENSMZEG00005015073	prpf8	100	92.128	ENSETEG00000017592	PRPF8	100	92.128	Echinops_telfairi
ENSMZEG00005015073	prpf8	99	93.276	ENSEBUG00000006548	prpf8	99	93.276	Eptatretus_burgeri
ENSMZEG00005015073	prpf8	100	97.447	ENSEASG00005009514	PRPF8	99	98.534	Equus_asinus_asinus
ENSMZEG00005015073	prpf8	97	98.330	ENSECAG00000021318	PRPF8	100	98.330	Equus_caballus
ENSMZEG00005015073	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSMZEG00005015073	prpf8	98	97.261	ENSELUG00000007120	prpf8	99	97.261	Esox_lucius
ENSMZEG00005015073	prpf8	100	97.447	ENSFCAG00000006297	PRPF8	100	97.447	Felis_catus
ENSMZEG00005015073	prpf8	100	97.362	ENSFALG00000006628	PRPF8	100	97.362	Ficedula_albicollis
ENSMZEG00005015073	prpf8	100	97.447	ENSFDAG00000004711	PRPF8	100	97.447	Fukomys_damarensis
ENSMZEG00005015073	prpf8	100	98.383	ENSFHEG00000021084	prpf8	100	98.383	Fundulus_heteroclitus
ENSMZEG00005015073	prpf8	100	96.128	ENSGMOG00000002028	prpf8	99	96.128	Gadus_morhua
ENSMZEG00005015073	prpf8	100	97.489	ENSGALG00000002943	PRPF8	100	97.489	Gallus_gallus
ENSMZEG00005015073	prpf8	99	98.676	ENSGAFG00000010337	prpf8	99	98.676	Gambusia_affinis
ENSMZEG00005015073	prpf8	100	98.596	ENSGACG00000008504	prpf8	100	98.464	Gasterosteus_aculeatus
ENSMZEG00005015073	prpf8	100	97.489	ENSGAGG00000008350	PRPF8	100	97.489	Gopherus_agassizii
ENSMZEG00005015073	prpf8	100	97.447	ENSGGOG00000005516	PRPF8	100	97.447	Gorilla_gorilla
ENSMZEG00005015073	prpf8	100	99.234	ENSHBUG00000016192	prpf8	100	99.234	Haplochromis_burtoni
ENSMZEG00005015073	prpf8	100	97.447	ENSHGLG00000012029	PRPF8	100	97.447	Heterocephalus_glaber_female
ENSMZEG00005015073	prpf8	100	97.447	ENSHGLG00100016494	PRPF8	100	97.447	Heterocephalus_glaber_male
ENSMZEG00005015073	prpf8	100	98.468	ENSHCOG00000016414	prpf8	100	98.468	Hippocampus_comes
ENSMZEG00005015073	prpf8	100	98.298	ENSIPUG00000023230	prpf8	100	98.298	Ictalurus_punctatus
ENSMZEG00005015073	prpf8	100	97.447	ENSSTOG00000005128	PRPF8	100	97.447	Ictidomys_tridecemlineatus
ENSMZEG00005015073	prpf8	100	95.319	ENSJJAG00000021159	Prpf8	100	95.319	Jaculus_jaculus
ENSMZEG00005015073	prpf8	99	98.762	ENSKMAG00000016118	prpf8	100	98.762	Kryptolebias_marmoratus
ENSMZEG00005015073	prpf8	100	98.511	ENSLBEG00000026903	prpf8	100	98.511	Labrus_bergylta
ENSMZEG00005015073	prpf8	95	95.112	ENSLACG00000010479	PRPF8	99	98.213	Latimeria_chalumnae
ENSMZEG00005015073	prpf8	99	98.043	ENSLOCG00000005409	prpf8	99	98.043	Lepisosteus_oculatus
ENSMZEG00005015073	prpf8	100	97.447	ENSLAFG00000015445	PRPF8	100	97.447	Loxodonta_africana
ENSMZEG00005015073	prpf8	100	97.447	ENSMFAG00000039995	PRPF8	100	97.447	Macaca_fascicularis
ENSMZEG00005015073	prpf8	100	97.447	ENSMMUG00000004820	PRPF8	100	97.447	Macaca_mulatta
ENSMZEG00005015073	prpf8	100	97.447	ENSMNEG00000035713	PRPF8	100	97.447	Macaca_nemestrina
ENSMZEG00005015073	prpf8	100	97.447	ENSMLEG00000037937	PRPF8	100	97.447	Mandrillus_leucophaeus
ENSMZEG00005015073	prpf8	100	98.809	ENSMAMG00000008919	prpf8	100	98.809	Mastacembelus_armatus
ENSMZEG00005015073	prpf8	100	97.489	ENSMGAG00000004769	PRPF8	100	97.489	Meleagris_gallopavo
ENSMZEG00005015073	prpf8	100	97.447	ENSMICG00000010320	PRPF8	100	97.447	Microcebus_murinus
ENSMZEG00005015073	prpf8	100	97.447	ENSMOCG00000016838	Prpf8	100	97.447	Microtus_ochrogaster
ENSMZEG00005015073	prpf8	100	98.298	ENSMMOG00000011887	prpf8	100	98.298	Mola_mola
ENSMZEG00005015073	prpf8	100	97.362	ENSMODG00000010480	PRPF8	100	97.362	Monodelphis_domestica
ENSMZEG00005015073	prpf8	97	98.445	ENSMALG00000003558	prpf8	100	98.445	Monopterus_albus
ENSMZEG00005015073	prpf8	100	97.404	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.404	Mus_caroli
ENSMZEG00005015073	prpf8	100	97.404	ENSMUSG00000020850	Prpf8	100	97.404	Mus_musculus
ENSMZEG00005015073	prpf8	100	97.362	MGP_PahariEiJ_G0017877	Prpf8	100	97.362	Mus_pahari
ENSMZEG00005015073	prpf8	100	97.404	MGP_SPRETEiJ_G0017583	Prpf8	100	97.404	Mus_spretus
ENSMZEG00005015073	prpf8	100	97.447	ENSMPUG00000013227	PRPF8	100	97.447	Mustela_putorius_furo
ENSMZEG00005015073	prpf8	100	97.323	ENSMLUG00000002666	PRPF8	100	97.323	Myotis_lucifugus
ENSMZEG00005015073	prpf8	100	95.702	ENSNGAG00000005305	Prpf8	100	95.702	Nannospalax_galili
ENSMZEG00005015073	prpf8	100	99.957	ENSNBRG00000013127	prpf8	100	99.957	Neolamprologus_brichardi
ENSMZEG00005015073	prpf8	97	96.760	ENSNLEG00000000897	PRPF8	98	96.760	Nomascus_leucogenys
ENSMZEG00005015073	prpf8	98	96.393	ENSMEUG00000015999	PRPF8	100	96.393	Notamacropus_eugenii
ENSMZEG00005015073	prpf8	100	95.702	ENSOPRG00000003102	PRPF8	100	95.285	Ochotona_princeps
ENSMZEG00005015073	prpf8	100	97.447	ENSODEG00000008468	PRPF8	100	97.447	Octodon_degus
ENSMZEG00005015073	prpf8	100	99.872	ENSONIG00000008153	prpf8	100	99.872	Oreochromis_niloticus
ENSMZEG00005015073	prpf8	81	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSMZEG00005015073	prpf8	100	97.447	ENSOCUG00000000081	PRPF8	100	97.447	Oryctolagus_cuniculus
ENSMZEG00005015073	prpf8	100	98.641	ENSORLG00000008036	prpf8	100	98.889	Oryzias_latipes
ENSMZEG00005015073	prpf8	100	98.599	ENSORLG00020021070	prpf8	100	98.599	Oryzias_latipes_hni
ENSMZEG00005015073	prpf8	100	98.641	ENSORLG00015002340	prpf8	100	98.641	Oryzias_latipes_hsok
ENSMZEG00005015073	prpf8	100	97.196	ENSOMEG00000016866	prpf8	100	97.196	Oryzias_melastigma
ENSMZEG00005015073	prpf8	100	97.323	ENSOARG00000013312	PRPF8	100	97.323	Ovis_aries
ENSMZEG00005015073	prpf8	100	97.447	ENSPPAG00000042753	PRPF8	100	97.447	Pan_paniscus
ENSMZEG00005015073	prpf8	100	97.447	ENSPPRG00000008746	PRPF8	100	97.447	Panthera_pardus
ENSMZEG00005015073	prpf8	100	97.362	ENSPTIG00000019200	PRPF8	100	97.362	Panthera_tigris_altaica
ENSMZEG00005015073	prpf8	100	97.447	ENSPTRG00000039576	PRPF8	100	97.447	Pan_troglodytes
ENSMZEG00005015073	prpf8	98	98.306	ENSPANG00000024607	PRPF8	98	98.306	Papio_anubis
ENSMZEG00005015073	prpf8	100	98.596	ENSPKIG00000011201	prpf8	100	98.596	Paramormyrops_kingsleyae
ENSMZEG00005015073	prpf8	100	97.319	ENSPSIG00000013393	PRPF8	100	97.319	Pelodiscus_sinensis
ENSMZEG00005015073	prpf8	100	97.447	ENSPEMG00000021699	Prpf8	100	97.447	Peromyscus_maniculatus_bairdii
ENSMZEG00005015073	prpf8	96	93.853	ENSPMAG00000005438	prpf8	100	93.898	Petromyzon_marinus
ENSMZEG00005015073	prpf8	100	97.362	ENSPCIG00000022603	PRPF8	100	98.215	Phascolarctos_cinereus
ENSMZEG00005015073	prpf8	100	98.643	ENSPFOG00000007005	prpf8	100	98.643	Poecilia_formosa
ENSMZEG00005015073	prpf8	100	96.894	ENSPLAG00000020777	prpf8	100	96.894	Poecilia_latipinna
ENSMZEG00005015073	prpf8	100	98.643	ENSPMEG00000004051	prpf8	100	98.643	Poecilia_mexicana
ENSMZEG00005015073	prpf8	100	98.558	ENSPREG00000021902	prpf8	100	98.558	Poecilia_reticulata
ENSMZEG00005015073	prpf8	100	97.447	ENSPPYG00000007777	PRPF8	100	97.447	Pongo_abelii
ENSMZEG00005015073	prpf8	90	97.030	ENSPCAG00000008938	PRPF8	90	97.030	Procavia_capensis
ENSMZEG00005015073	prpf8	100	97.447	ENSPCOG00000015182	PRPF8	100	97.447	Propithecus_coquereli
ENSMZEG00005015073	prpf8	93	98.559	ENSPVAG00000002134	PRPF8	93	98.559	Pteropus_vampyrus
ENSMZEG00005015073	prpf8	100	99.234	ENSPNYG00000016356	prpf8	100	99.234	Pundamilia_nyererei
ENSMZEG00005015073	prpf8	100	98.383	ENSPNAG00000009247	prpf8	100	98.383	Pygocentrus_nattereri
ENSMZEG00005015073	prpf8	100	97.404	ENSRNOG00000003495	Prpf8	100	97.404	Rattus_norvegicus
ENSMZEG00005015073	prpf8	100	97.447	ENSRBIG00000031219	PRPF8	100	97.858	Rhinopithecus_bieti
ENSMZEG00005015073	prpf8	100	97.447	ENSRROG00000038014	PRPF8	100	97.858	Rhinopithecus_roxellana
ENSMZEG00005015073	prpf8	98	62.430	YHR165C	PRP8	95	62.473	Saccharomyces_cerevisiae
ENSMZEG00005015073	prpf8	100	97.447	ENSSBOG00000029717	PRPF8	100	97.447	Saimiri_boliviensis_boliviensis
ENSMZEG00005015073	prpf8	100	97.319	ENSSHAG00000006167	PRPF8	100	97.319	Sarcophilus_harrisii
ENSMZEG00005015073	prpf8	100	98.340	ENSSFOG00015013905	prpf8	100	98.340	Scleropages_formosus
ENSMZEG00005015073	prpf8	100	98.596	ENSSMAG00000017736	prpf8	100	98.596	Scophthalmus_maximus
ENSMZEG00005015073	prpf8	100	98.936	ENSSDUG00000003029	prpf8	100	98.936	Seriola_dumerili
ENSMZEG00005015073	prpf8	68	99.812	ENSSLDG00000017096	prpf8	100	99.812	Seriola_lalandi_dorsalis
ENSMZEG00005015073	prpf8	87	94.553	ENSSARG00000002892	PRPF8	87	94.553	Sorex_araneus
ENSMZEG00005015073	prpf8	100	97.319	ENSSPUG00000007463	PRPF8	100	97.319	Sphenodon_punctatus
ENSMZEG00005015073	prpf8	100	98.383	ENSSPAG00000015639	prpf8	100	98.383	Stegastes_partitus
ENSMZEG00005015073	prpf8	100	97.447	ENSSSCG00000017817	PRPF8	100	97.447	Sus_scrofa
ENSMZEG00005015073	prpf8	51	98.778	ENSTGUG00000015597	-	95	98.778	Taeniopygia_guttata
ENSMZEG00005015073	prpf8	100	97.362	ENSTGUG00000005648	-	100	97.362	Taeniopygia_guttata
ENSMZEG00005015073	prpf8	100	98.468	ENSTRUG00000015906	prpf8	100	98.468	Takifugu_rubripes
ENSMZEG00005015073	prpf8	95	99.582	ENSTNIG00000003460	prpf8	99	99.582	Tetraodon_nigroviridis
ENSMZEG00005015073	prpf8	93	98.911	ENSTBEG00000006431	PRPF8	93	98.911	Tupaia_belangeri
ENSMZEG00005015073	prpf8	100	96.894	ENSTTRG00000006869	PRPF8	100	96.894	Tursiops_truncatus
ENSMZEG00005015073	prpf8	54	96.075	ENSUAMG00000015644	-	96	96.075	Ursus_americanus
ENSMZEG00005015073	prpf8	100	97.191	ENSUMAG00000009385	PRPF8	100	97.191	Ursus_maritimus
ENSMZEG00005015073	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSMZEG00005015073	prpf8	100	97.447	ENSVVUG00000021695	PRPF8	99	97.447	Vulpes_vulpes
ENSMZEG00005015073	prpf8	100	97.235	ENSXETG00000022259	prpf8	100	97.235	Xenopus_tropicalis
ENSMZEG00005015073	prpf8	100	98.468	ENSXCOG00000012775	prpf8	100	98.468	Xiphophorus_couchianus
ENSMZEG00005015073	prpf8	100	98.426	ENSXMAG00000008505	prpf8	100	98.426	Xiphophorus_maculatus