EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005015134 (Gene tree)
Gene ID: 101466804
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 2522 bases
Position: chrLG6:39229585-39232106
Accession: 101466804
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005020173	RNA_pol_Rpc34	PF05158.12	2.6e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005020822	-	951	XM_004574026	ENSMZEP00005020173	316 (aa)	XP_004574083	UPI0003298299

Gene Model

Click here to download ENSMZEG00005015134's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03020	RNA polymerase	KEGG
mze04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005015134's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005015134	polr3f	100	87.342	ENSG00000132664	POLR3F	100	87.342	Homo_sapiens
ENSMZEG00005015134	polr3f	100	95.886	ENSAPOG00000008271	polr3f	100	95.886	Acanthochromis_polyacanthus
ENSMZEG00005015134	polr3f	100	87.025	ENSAMEG00000005222	POLR3F	100	87.025	Ailuropoda_melanoleuca
ENSMZEG00005015134	polr3f	100	88.924	ENSACIG00000006705	polr3f	100	88.924	Amphilophus_citrinellus
ENSMZEG00005015134	polr3f	100	96.835	ENSAOCG00000000687	polr3f	100	96.835	Amphiprion_ocellaris
ENSMZEG00005015134	polr3f	100	96.519	ENSAPEG00000015263	polr3f	100	96.519	Amphiprion_percula
ENSMZEG00005015134	polr3f	87	97.818	ENSATEG00000015539	polr3f	100	97.818	Anabas_testudineus
ENSMZEG00005015134	polr3f	87	89.818	ENSAPLG00000005533	POLR3F	100	89.818	Anas_platyrhynchos
ENSMZEG00005015134	polr3f	97	86.364	ENSACAG00000014293	POLR3F	99	86.364	Anolis_carolinensis
ENSMZEG00005015134	polr3f	100	87.658	ENSANAG00000026726	POLR3F	100	87.658	Aotus_nancymaae
ENSMZEG00005015134	polr3f	100	99.684	ENSACLG00000003615	polr3f	100	99.684	Astatotilapia_calliptera
ENSMZEG00005015134	polr3f	100	91.456	ENSAMXG00000036020	polr3f	100	91.456	Astyanax_mexicanus
ENSMZEG00005015134	polr3f	100	86.709	ENSBTAG00000008825	POLR3F	100	86.709	Bos_taurus
ENSMZEG00005015134	polr3f	99	33.333	WBGene00021112	W09C3.4	99	33.333	Caenorhabditis_elegans
ENSMZEG00005015134	polr3f	100	87.658	ENSCJAG00000005159	POLR3F	100	87.658	Callithrix_jacchus
ENSMZEG00005015134	polr3f	100	87.342	ENSCAFG00000005420	POLR3F	100	87.342	Canis_familiaris
ENSMZEG00005015134	polr3f	100	87.342	ENSCAFG00020027500	POLR3F	100	87.342	Canis_lupus_dingo
ENSMZEG00005015134	polr3f	100	86.709	ENSCHIG00000014743	POLR3F	100	86.709	Capra_hircus
ENSMZEG00005015134	polr3f	100	86.709	ENSTSYG00000004207	POLR3F	100	86.709	Carlito_syrichta
ENSMZEG00005015134	polr3f	93	48.311	ENSCAPG00000008423	POLR3F	100	72.078	Cavia_aperea
ENSMZEG00005015134	polr3f	100	86.709	ENSCPOG00000002400	POLR3F	100	86.709	Cavia_porcellus
ENSMZEG00005015134	polr3f	100	77.848	ENSCCAG00000021800	POLR3F	100	77.848	Cebus_capucinus
ENSMZEG00005015134	polr3f	100	87.025	ENSCATG00000019507	POLR3F	100	87.025	Cercocebus_atys
ENSMZEG00005015134	polr3f	100	87.025	ENSCLAG00000016296	POLR3F	100	87.025	Chinchilla_lanigera
ENSMZEG00005015134	polr3f	100	87.025	ENSCSAG00000011513	POLR3F	100	87.025	Chlorocebus_sabaeus
ENSMZEG00005015134	polr3f	73	87.640	ENSCHOG00000013268	POLR3F	73	87.640	Choloepus_hoffmanni
ENSMZEG00005015134	polr3f	87	89.091	ENSCPBG00000023473	POLR3F	100	89.091	Chrysemys_picta_bellii
ENSMZEG00005015134	polr3f	99	58.861	ENSCING00000001212	-	99	58.861	Ciona_intestinalis
ENSMZEG00005015134	polr3f	71	58.222	ENSCSAVG00000003340	-	96	63.905	Ciona_savignyi
ENSMZEG00005015134	polr3f	92	86.598	ENSCANG00000037390	POLR3F	100	86.598	Colobus_angolensis_palliatus
ENSMZEG00005015134	polr3f	100	86.076	ENSCGRG00001002032	Polr3f	100	86.076	Cricetulus_griseus_chok1gshd
ENSMZEG00005015134	polr3f	100	86.076	ENSCGRG00000010852	Polr3f	100	86.076	Cricetulus_griseus_crigri
ENSMZEG00005015134	polr3f	100	93.038	ENSCSEG00000001247	polr3f	100	93.038	Cynoglossus_semilaevis
ENSMZEG00005015134	polr3f	100	94.304	ENSCVAG00000007611	polr3f	100	94.304	Cyprinodon_variegatus
ENSMZEG00005015134	polr3f	100	91.456	ENSDARG00000012572	polr3f	100	91.456	Danio_rerio
ENSMZEG00005015134	polr3f	100	83.861	ENSDNOG00000010719	POLR3F	100	83.861	Dasypus_novemcinctus
ENSMZEG00005015134	polr3f	100	87.025	ENSDORG00000016352	Polr3f	100	87.025	Dipodomys_ordii
ENSMZEG00005015134	polr3f	95	50.000	FBgn0038951	CG5380	99	50.000	Drosophila_melanogaster
ENSMZEG00005015134	polr3f	88	51.971	ENSETEG00000015485	-	99	51.971	Echinops_telfairi
ENSMZEG00005015134	polr3f	100	74.684	ENSEBUG00000006783	polr3f	100	74.684	Eptatretus_burgeri
ENSMZEG00005015134	polr3f	100	87.342	ENSEASG00005002022	POLR3F	100	87.342	Equus_asinus_asinus
ENSMZEG00005015134	polr3f	100	87.342	ENSECAG00000009920	POLR3F	100	87.342	Equus_caballus
ENSMZEG00005015134	polr3f	80	88.000	ENSEEUG00000000184	POLR3F	80	88.000	Erinaceus_europaeus
ENSMZEG00005015134	polr3f	100	91.456	ENSELUG00000001558	polr3f	100	91.456	Esox_lucius
ENSMZEG00005015134	polr3f	100	87.025	ENSFCAG00000013828	POLR3F	100	87.025	Felis_catus
ENSMZEG00005015134	polr3f	87	90.909	ENSFALG00000007623	POLR3F	100	90.909	Ficedula_albicollis
ENSMZEG00005015134	polr3f	100	86.392	ENSFDAG00000002528	POLR3F	100	86.392	Fukomys_damarensis
ENSMZEG00005015134	polr3f	100	93.354	ENSFHEG00000006450	polr3f	100	93.354	Fundulus_heteroclitus
ENSMZEG00005015134	polr3f	100	88.608	ENSGALG00000008749	POLR3F	100	88.608	Gallus_gallus
ENSMZEG00005015134	polr3f	100	94.620	ENSGAFG00000003698	polr3f	100	94.620	Gambusia_affinis
ENSMZEG00005015134	polr3f	100	87.658	ENSGAGG00000006151	POLR3F	100	87.658	Gopherus_agassizii
ENSMZEG00005015134	polr3f	100	87.342	ENSGGOG00000011543	POLR3F	100	87.342	Gorilla_gorilla
ENSMZEG00005015134	polr3f	100	99.367	ENSHBUG00000013806	polr3f	100	99.367	Haplochromis_burtoni
ENSMZEG00005015134	polr3f	100	86.392	ENSHGLG00000011867	POLR3F	100	86.392	Heterocephalus_glaber_female
ENSMZEG00005015134	polr3f	100	86.392	ENSHGLG00100012577	POLR3F	100	86.392	Heterocephalus_glaber_male
ENSMZEG00005015134	polr3f	100	83.228	ENSHCOG00000011751	polr3f	100	83.228	Hippocampus_comes
ENSMZEG00005015134	polr3f	100	91.772	ENSIPUG00000013347	polr3f	100	91.772	Ictalurus_punctatus
ENSMZEG00005015134	polr3f	100	87.025	ENSSTOG00000013588	POLR3F	100	87.025	Ictidomys_tridecemlineatus
ENSMZEG00005015134	polr3f	100	86.392	ENSJJAG00000017513	Polr3f	100	86.392	Jaculus_jaculus
ENSMZEG00005015134	polr3f	87	88.000	ENSKMAG00000016495	polr3f	100	88.000	Kryptolebias_marmoratus
ENSMZEG00005015134	polr3f	73	96.552	ENSLBEG00000011998	polr3f	100	96.552	Labrus_bergylta
ENSMZEG00005015134	polr3f	100	87.975	ENSLACG00000009371	POLR3F	100	87.975	Latimeria_chalumnae
ENSMZEG00005015134	polr3f	100	91.139	ENSLOCG00000015701	polr3f	100	91.139	Lepisosteus_oculatus
ENSMZEG00005015134	polr3f	100	86.709	ENSLAFG00000004929	POLR3F	100	86.709	Loxodonta_africana
ENSMZEG00005015134	polr3f	100	87.025	ENSMFAG00000002227	POLR3F	100	87.025	Macaca_fascicularis
ENSMZEG00005015134	polr3f	87	88.727	ENSMMUG00000004143	POLR3F	100	88.727	Macaca_mulatta
ENSMZEG00005015134	polr3f	100	87.025	ENSMNEG00000033404	POLR3F	100	87.025	Macaca_nemestrina
ENSMZEG00005015134	polr3f	100	87.025	ENSMLEG00000021905	POLR3F	100	87.025	Mandrillus_leucophaeus
ENSMZEG00005015134	polr3f	100	94.620	ENSMAMG00000017975	polr3f	100	94.620	Mastacembelus_armatus
ENSMZEG00005015134	polr3f	100	88.608	ENSMGAG00000006691	POLR3F	100	88.608	Meleagris_gallopavo
ENSMZEG00005015134	polr3f	100	86.392	ENSMAUG00000020176	Polr3f	100	86.392	Mesocricetus_auratus
ENSMZEG00005015134	polr3f	100	87.025	ENSMICG00000044519	POLR3F	100	87.025	Microcebus_murinus
ENSMZEG00005015134	polr3f	100	86.709	ENSMOCG00000018352	Polr3f	100	86.709	Microtus_ochrogaster
ENSMZEG00005015134	polr3f	93	94.949	ENSMMOG00000018477	polr3f	100	94.949	Mola_mola
ENSMZEG00005015134	polr3f	100	87.658	ENSMODG00000005624	POLR3F	100	87.658	Monodelphis_domestica
ENSMZEG00005015134	polr3f	100	95.253	ENSMALG00000006685	polr3f	100	95.253	Monopterus_albus
ENSMZEG00005015134	polr3f	100	86.076	MGP_CAROLIEiJ_G0024385	Polr3f	100	86.076	Mus_caroli
ENSMZEG00005015134	polr3f	100	86.076	ENSMUSG00000027427	Polr3f	100	86.076	Mus_musculus
ENSMZEG00005015134	polr3f	100	86.076	MGP_PahariEiJ_G0025829	Polr3f	100	86.076	Mus_pahari
ENSMZEG00005015134	polr3f	100	86.076	MGP_SPRETEiJ_G0025304	Polr3f	100	86.076	Mus_spretus
ENSMZEG00005015134	polr3f	100	66.462	ENSMPUG00000001252	-	100	66.462	Mustela_putorius_furo
ENSMZEG00005015134	polr3f	100	87.025	ENSMLUG00000014844	POLR3F	100	87.025	Myotis_lucifugus
ENSMZEG00005015134	polr3f	100	85.759	ENSNGAG00000010898	Polr3f	100	85.759	Nannospalax_galili
ENSMZEG00005015134	polr3f	100	99.051	ENSNBRG00000020796	polr3f	100	99.051	Neolamprologus_brichardi
ENSMZEG00005015134	polr3f	100	87.342	ENSNLEG00000009778	POLR3F	100	87.342	Nomascus_leucogenys
ENSMZEG00005015134	polr3f	93	82.712	ENSMEUG00000010320	POLR3F	100	82.712	Notamacropus_eugenii
ENSMZEG00005015134	polr3f	100	85.759	ENSOPRG00000003385	POLR3F	100	85.759	Ochotona_princeps
ENSMZEG00005015134	polr3f	100	87.342	ENSODEG00000011521	POLR3F	100	87.342	Octodon_degus
ENSMZEG00005015134	polr3f	100	96.835	ENSONIG00000006858	polr3f	100	96.835	Oreochromis_niloticus
ENSMZEG00005015134	polr3f	100	87.658	ENSOANG00000001253	POLR3F	100	87.658	Ornithorhynchus_anatinus
ENSMZEG00005015134	polr3f	100	86.709	ENSOCUG00000015067	POLR3F	100	86.709	Oryctolagus_cuniculus
ENSMZEG00005015134	polr3f	100	92.405	ENSORLG00000022412	polr3f	100	92.405	Oryzias_latipes
ENSMZEG00005015134	polr3f	100	92.405	ENSORLG00020021944	polr3f	100	92.405	Oryzias_latipes_hni
ENSMZEG00005015134	polr3f	100	86.076	ENSOGAG00000002916	POLR3F	100	86.076	Otolemur_garnettii
ENSMZEG00005015134	polr3f	100	52.848	ENSOARG00000008647	-	100	51.899	Ovis_aries
ENSMZEG00005015134	polr3f	100	86.709	ENSOARG00000000315	-	100	86.709	Ovis_aries
ENSMZEG00005015134	polr3f	100	87.342	ENSPPAG00000036681	POLR3F	100	87.342	Pan_paniscus
ENSMZEG00005015134	polr3f	100	87.025	ENSPPRG00000024604	POLR3F	100	87.025	Panthera_pardus
ENSMZEG00005015134	polr3f	100	87.025	ENSPTIG00000020292	POLR3F	100	87.025	Panthera_tigris_altaica
ENSMZEG00005015134	polr3f	100	87.342	ENSPTRG00000013287	POLR3F	100	87.342	Pan_troglodytes
ENSMZEG00005015134	polr3f	100	87.025	ENSPANG00000025015	POLR3F	100	87.025	Papio_anubis
ENSMZEG00005015134	polr3f	100	90.823	ENSPKIG00000004427	polr3f	100	90.823	Paramormyrops_kingsleyae
ENSMZEG00005015134	polr3f	87	90.545	ENSPSIG00000016613	POLR3F	100	90.545	Pelodiscus_sinensis
ENSMZEG00005015134	polr3f	100	58.621	ENSPMGG00000018350	polr3f	100	62.342	Periophthalmus_magnuspinnatus
ENSMZEG00005015134	polr3f	100	87.025	ENSPEMG00000006966	Polr3f	100	87.025	Peromyscus_maniculatus_bairdii
ENSMZEG00005015134	polr3f	100	77.215	ENSPMAG00000005530	polr3f	100	77.215	Petromyzon_marinus
ENSMZEG00005015134	polr3f	100	87.342	ENSPCIG00000000908	POLR3F	85	87.342	Phascolarctos_cinereus
ENSMZEG00005015134	polr3f	100	95.253	ENSPFOG00000018334	polr3f	100	95.253	Poecilia_formosa
ENSMZEG00005015134	polr3f	100	95.253	ENSPLAG00000021803	polr3f	100	95.253	Poecilia_latipinna
ENSMZEG00005015134	polr3f	100	95.253	ENSPMEG00000013150	polr3f	100	95.253	Poecilia_mexicana
ENSMZEG00005015134	polr3f	100	95.253	ENSPREG00000005278	polr3f	100	95.253	Poecilia_reticulata
ENSMZEG00005015134	polr3f	100	87.342	ENSPPYG00000010737	POLR3F	100	87.342	Pongo_abelii
ENSMZEG00005015134	polr3f	66	88.514	ENSPCAG00000004893	POLR3F	70	88.514	Procavia_capensis
ENSMZEG00005015134	polr3f	100	87.025	ENSPCOG00000004543	POLR3F	100	87.025	Propithecus_coquereli
ENSMZEG00005015134	polr3f	100	86.709	ENSPVAG00000000403	POLR3F	100	86.709	Pteropus_vampyrus
ENSMZEG00005015134	polr3f	100	99.367	ENSPNYG00000016276	polr3f	100	99.367	Pundamilia_nyererei
ENSMZEG00005015134	polr3f	100	92.089	ENSPNAG00000005164	polr3f	100	92.089	Pygocentrus_nattereri
ENSMZEG00005015134	polr3f	100	86.392	ENSRNOG00000007548	Polr3f	85	86.392	Rattus_norvegicus
ENSMZEG00005015134	polr3f	100	87.025	ENSRBIG00000021268	POLR3F	100	87.025	Rhinopithecus_bieti
ENSMZEG00005015134	polr3f	100	87.025	ENSRROG00000039911	POLR3F	100	87.025	Rhinopithecus_roxellana
ENSMZEG00005015134	polr3f	50	32.530	YNR003C	RPC34	52	33.333	Saccharomyces_cerevisiae
ENSMZEG00005015134	polr3f	100	87.658	ENSSBOG00000018207	POLR3F	100	87.658	Saimiri_boliviensis_boliviensis
ENSMZEG00005015134	polr3f	100	69.401	ENSSHAG00000018160	POLR3F	100	69.401	Sarcophilus_harrisii
ENSMZEG00005015134	polr3f	100	90.506	ENSSFOG00015022433	polr3f	100	90.506	Scleropages_formosus
ENSMZEG00005015134	polr3f	100	93.987	ENSSMAG00000021029	polr3f	100	93.987	Scophthalmus_maximus
ENSMZEG00005015134	polr3f	100	84.494	ENSSDUG00000022435	polr3f	100	84.494	Seriola_dumerili
ENSMZEG00005015134	polr3f	100	94.937	ENSSLDG00000012761	polr3f	100	94.937	Seriola_lalandi_dorsalis
ENSMZEG00005015134	polr3f	100	78.481	ENSSARG00000006039	POLR3F	100	78.481	Sorex_araneus
ENSMZEG00005015134	polr3f	100	87.342	ENSSPUG00000001873	POLR3F	100	87.342	Sphenodon_punctatus
ENSMZEG00005015134	polr3f	100	87.975	ENSSPAG00000002092	polr3f	100	87.975	Stegastes_partitus
ENSMZEG00005015134	polr3f	100	86.709	ENSSSCG00000007095	POLR3F	100	91.379	Sus_scrofa
ENSMZEG00005015134	polr3f	100	88.608	ENSTGUG00000005839	POLR3F	100	88.608	Taeniopygia_guttata
ENSMZEG00005015134	polr3f	100	93.038	ENSTRUG00000012101	polr3f	100	93.038	Takifugu_rubripes
ENSMZEG00005015134	polr3f	100	91.772	ENSTNIG00000006456	polr3f	100	91.772	Tetraodon_nigroviridis
ENSMZEG00005015134	polr3f	100	71.203	ENSTBEG00000007921	POLR3F	100	71.203	Tupaia_belangeri
ENSMZEG00005015134	polr3f	100	86.709	ENSTTRG00000002580	POLR3F	100	86.709	Tursiops_truncatus
ENSMZEG00005015134	polr3f	53	88.554	ENSUAMG00000024166	POLR3F	100	88.554	Ursus_americanus
ENSMZEG00005015134	polr3f	100	86.709	ENSUMAG00000024944	POLR3F	100	86.709	Ursus_maritimus
ENSMZEG00005015134	polr3f	100	86.076	ENSVPAG00000009063	POLR3F	100	86.076	Vicugna_pacos
ENSMZEG00005015134	polr3f	100	87.342	ENSVVUG00000012925	POLR3F	100	87.342	Vulpes_vulpes
ENSMZEG00005015134	polr3f	100	85.759	ENSXETG00000024898	polr3f	100	85.759	Xenopus_tropicalis
ENSMZEG00005015134	polr3f	87	95.636	ENSXCOG00000010301	polr3f	100	95.636	Xiphophorus_couchianus
ENSMZEG00005015134	polr3f	100	94.937	ENSXMAG00000004604	polr3f	100	94.937	Xiphophorus_maculatus