EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005015179 (Gene tree)
Gene ID: 101472208
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 17431 bases
Position: chrLG17:5634498-5651928
Accession: 101472208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005020248	RRM_1	PF00076.22	4e-05	1	1
ENSMZEP00005020236	RRM_1	PF00076.22	4.4e-05	1	1
ENSMZEP00005020248	G-patch	PF01585.23	5e-13	1	1
ENSMZEP00005020236	G-patch	PF01585.23	5.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005020900	-	1194	-	ENSMZEP00005020248	397 (aa)	-	-
ENSMZET00005020888	-	1717	XM_024805629	ENSMZEP00005020236	418 (aa)	XP_024661397	UPI0003BC8A69

Gene Model

Click here to download ENSMZEG00005015179's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005015179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005015179	rbm17	100	80.332	ENSG00000134453	RBM17	100	80.332	Homo_sapiens
ENSMZEG00005015179	rbm17	99	96.386	ENSAPOG00000007101	rbm17	99	96.386	Acanthochromis_polyacanthus
ENSMZEG00005015179	rbm17	100	80.569	ENSAMEG00000002107	RBM17	100	80.569	Ailuropoda_melanoleuca
ENSMZEG00005015179	rbm17	100	95.309	ENSACIG00000006251	rbm17	100	95.309	Amphilophus_citrinellus
ENSMZEG00005015179	rbm17	100	96.420	ENSAOCG00000014892	rbm17	100	96.420	Amphiprion_ocellaris
ENSMZEG00005015179	rbm17	100	96.420	ENSAPEG00000022779	rbm17	100	96.420	Amphiprion_percula
ENSMZEG00005015179	rbm17	100	93.112	ENSATEG00000004406	rbm17	100	93.112	Anabas_testudineus
ENSMZEG00005015179	rbm17	100	81.754	ENSAPLG00000004190	RBM17	100	81.754	Anas_platyrhynchos
ENSMZEG00005015179	rbm17	90	79.070	ENSACAG00000005418	RBM17	99	79.070	Anolis_carolinensis
ENSMZEG00005015179	rbm17	100	80.806	ENSANAG00000030127	RBM17	98	88.430	Aotus_nancymaae
ENSMZEG00005015179	rbm17	100	72.616	ENSANAG00000019330	-	95	87.069	Aotus_nancymaae
ENSMZEG00005015179	rbm17	100	100.000	ENSACLG00000003928	rbm17	100	100.000	Astatotilapia_calliptera
ENSMZEG00005015179	rbm17	100	84.360	ENSAMXG00000005853	rbm17	100	85.782	Astyanax_mexicanus
ENSMZEG00005015179	rbm17	100	80.569	ENSBTAG00000021951	RBM17	100	80.569	Bos_taurus
ENSMZEG00005015179	rbm17	100	79.384	ENSBTAG00000011094	-	100	79.384	Bos_taurus
ENSMZEG00005015179	rbm17	97	31.951	WBGene00010233	F58B3.7	97	31.294	Caenorhabditis_elegans
ENSMZEG00005015179	rbm17	100	80.905	ENSCJAG00000020573	RBM17	100	80.905	Callithrix_jacchus
ENSMZEG00005015179	rbm17	100	80.569	ENSCAFG00000005206	RBM17	100	80.569	Canis_familiaris
ENSMZEG00005015179	rbm17	100	80.653	ENSCAFG00020005420	RBM17	100	80.653	Canis_lupus_dingo
ENSMZEG00005015179	rbm17	100	78.436	ENSCHIG00000019921	-	100	78.436	Capra_hircus
ENSMZEG00005015179	rbm17	100	80.653	ENSCHIG00000023204	-	100	80.653	Capra_hircus
ENSMZEG00005015179	rbm17	100	80.569	ENSTSYG00000001165	RBM17	99	89.831	Carlito_syrichta
ENSMZEG00005015179	rbm17	96	62.716	ENSCAPG00000006275	RBM17	100	68.508	Cavia_aperea
ENSMZEG00005015179	rbm17	100	79.800	ENSCPOG00000005679	RBM17	100	78.818	Cavia_porcellus
ENSMZEG00005015179	rbm17	100	80.806	ENSCCAG00000018655	RBM17	98	88.430	Cebus_capucinus
ENSMZEG00005015179	rbm17	100	80.402	ENSCATG00000041566	RBM17	97	89.167	Cercocebus_atys
ENSMZEG00005015179	rbm17	100	80.569	ENSCLAG00000012195	RBM17	99	80.569	Chinchilla_lanigera
ENSMZEG00005015179	rbm17	100	80.332	ENSCSAG00000013564	RBM17	100	80.332	Chlorocebus_sabaeus
ENSMZEG00005015179	rbm17	93	63.683	ENSCHOG00000005131	RBM17	100	63.683	Choloepus_hoffmanni
ENSMZEG00005015179	rbm17	100	81.043	ENSCPBG00000019836	RBM17	100	81.043	Chrysemys_picta_bellii
ENSMZEG00005015179	rbm17	100	45.882	ENSCSAVG00000008782	-	100	44.787	Ciona_savignyi
ENSMZEG00005015179	rbm17	98	72.059	ENSCANG00000023715	-	99	72.059	Colobus_angolensis_palliatus
ENSMZEG00005015179	rbm17	100	80.095	ENSCANG00000030987	RBM17	97	89.167	Colobus_angolensis_palliatus
ENSMZEG00005015179	rbm17	100	65.750	ENSCGRG00001009256	-	100	63.397	Cricetulus_griseus_chok1gshd
ENSMZEG00005015179	rbm17	100	80.806	ENSCGRG00001013842	Rbm17	100	80.806	Cricetulus_griseus_chok1gshd
ENSMZEG00005015179	rbm17	100	80.806	ENSCGRG00000006907	Rbm17	100	80.806	Cricetulus_griseus_crigri
ENSMZEG00005015179	rbm17	100	88.333	ENSCSEG00000018164	rbm17	100	88.333	Cynoglossus_semilaevis
ENSMZEG00005015179	rbm17	100	88.413	ENSCVAG00000002476	rbm17	100	87.032	Cyprinodon_variegatus
ENSMZEG00005015179	rbm17	100	80.332	ENSDARG00000031346	rbm17	100	80.332	Danio_rerio
ENSMZEG00005015179	rbm17	100	80.332	ENSDNOG00000035920	RBM17	100	80.332	Dasypus_novemcinctus
ENSMZEG00005015179	rbm17	99	37.671	FBgn0086683	Spf45	99	37.029	Drosophila_melanogaster
ENSMZEG00005015179	rbm17	87	85.782	ENSETEG00000006642	RBM17	86	85.782	Echinops_telfairi
ENSMZEG00005015179	rbm17	63	69.048	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSMZEG00005015179	rbm17	93	77.494	ENSEASG00005009236	-	100	77.494	Equus_asinus_asinus
ENSMZEG00005015179	rbm17	100	79.851	ENSEASG00005019205	-	100	79.602	Equus_asinus_asinus
ENSMZEG00005015179	rbm17	100	71.090	ENSECAG00000001379	-	100	71.090	Equus_caballus
ENSMZEG00005015179	rbm17	100	72.362	ENSECAG00000008939	RBM17	100	72.864	Equus_caballus
ENSMZEG00005015179	rbm17	86	63.562	ENSEEUG00000013077	RBM17	100	61.918	Erinaceus_europaeus
ENSMZEG00005015179	rbm17	100	86.014	ENSELUG00000006440	rbm17	100	86.014	Esox_lucius
ENSMZEG00005015179	rbm17	100	80.569	ENSFCAG00000031988	RBM17	100	80.569	Felis_catus
ENSMZEG00005015179	rbm17	100	80.569	ENSFALG00000001790	RBM17	100	80.569	Ficedula_albicollis
ENSMZEG00005015179	rbm17	100	80.569	ENSFDAG00000007470	RBM17	100	80.569	Fukomys_damarensis
ENSMZEG00005015179	rbm17	100	92.162	ENSFHEG00000001266	rbm17	100	90.680	Fundulus_heteroclitus
ENSMZEG00005015179	rbm17	99	82.734	ENSGMOG00000008438	rbm17	100	82.734	Gadus_morhua
ENSMZEG00005015179	rbm17	100	81.754	ENSGALG00000006332	RBM17	100	81.754	Gallus_gallus
ENSMZEG00005015179	rbm17	100	90.428	ENSGAFG00000019879	rbm17	100	90.680	Gambusia_affinis
ENSMZEG00005015179	rbm17	99	91.190	ENSGACG00000019174	rbm17	99	91.190	Gasterosteus_aculeatus
ENSMZEG00005015179	rbm17	100	81.043	ENSGAGG00000019906	RBM17	100	81.043	Gopherus_agassizii
ENSMZEG00005015179	rbm17	100	100.000	ENSHBUG00000016624	rbm17	100	100.000	Haplochromis_burtoni
ENSMZEG00005015179	rbm17	100	80.569	ENSHGLG00000011580	RBM17	100	80.569	Heterocephalus_glaber_female
ENSMZEG00005015179	rbm17	100	66.750	ENSHGLG00100010556	-	100	63.750	Heterocephalus_glaber_male
ENSMZEG00005015179	rbm17	100	80.569	ENSHGLG00100010460	RBM17	100	80.569	Heterocephalus_glaber_male
ENSMZEG00005015179	rbm17	99	89.688	ENSHCOG00000010865	rbm17	100	89.688	Hippocampus_comes
ENSMZEG00005015179	rbm17	100	76.179	ENSIPUG00000007699	Rbm17	100	80.896	Ictalurus_punctatus
ENSMZEG00005015179	rbm17	100	80.806	ENSSTOG00000013591	RBM17	100	80.806	Ictidomys_tridecemlineatus
ENSMZEG00005015179	rbm17	100	59.479	ENSJJAG00000000993	-	100	58.255	Jaculus_jaculus
ENSMZEG00005015179	rbm17	100	80.806	ENSJJAG00000022886	Rbm17	100	80.806	Jaculus_jaculus
ENSMZEG00005015179	rbm17	100	92.399	ENSKMAG00000021400	rbm17	100	92.399	Kryptolebias_marmoratus
ENSMZEG00005015179	rbm17	100	92.399	ENSLBEG00000000881	rbm17	100	92.399	Labrus_bergylta
ENSMZEG00005015179	rbm17	99	66.432	ENSLACG00000017297	RBM17	99	66.432	Latimeria_chalumnae
ENSMZEG00005015179	rbm17	100	81.797	ENSLOCG00000015659	rbm17	100	81.560	Lepisosteus_oculatus
ENSMZEG00005015179	rbm17	100	80.569	ENSLAFG00000011629	RBM17	100	80.569	Loxodonta_africana
ENSMZEG00005015179	rbm17	100	80.402	ENSMFAG00000035521	RBM17	97	89.167	Macaca_fascicularis
ENSMZEG00005015179	rbm17	100	80.332	ENSMMUG00000015152	RBM17	97	89.167	Macaca_mulatta
ENSMZEG00005015179	rbm17	100	80.402	ENSMNEG00000017264	RBM17	97	89.167	Macaca_nemestrina
ENSMZEG00005015179	rbm17	100	80.402	ENSMLEG00000029340	RBM17	97	89.167	Mandrillus_leucophaeus
ENSMZEG00005015179	rbm17	100	93.349	ENSMAMG00000000387	rbm17	100	93.349	Mastacembelus_armatus
ENSMZEG00005015179	rbm17	100	81.368	ENSMGAG00000003981	RBM17	100	81.368	Meleagris_gallopavo
ENSMZEG00005015179	rbm17	100	80.806	ENSMAUG00000019247	Rbm17	100	80.806	Mesocricetus_auratus
ENSMZEG00005015179	rbm17	100	80.332	ENSMICG00000003976	-	100	80.332	Microcebus_murinus
ENSMZEG00005015179	rbm17	100	75.177	ENSMICG00000041489	-	100	75.177	Microcebus_murinus
ENSMZEG00005015179	rbm17	100	80.806	ENSMOCG00000011847	Rbm17	100	80.806	Microtus_ochrogaster
ENSMZEG00005015179	rbm17	93	64.541	ENSMOCG00000014517	-	99	65.775	Microtus_ochrogaster
ENSMZEG00005015179	rbm17	100	85.086	ENSMMOG00000010264	rbm17	100	85.086	Mola_mola
ENSMZEG00005015179	rbm17	100	80.569	ENSMODG00000016648	RBM17	100	80.569	Monodelphis_domestica
ENSMZEG00005015179	rbm17	100	92.417	ENSMALG00000010597	rbm17	100	93.128	Monopterus_albus
ENSMZEG00005015179	rbm17	100	81.043	MGP_CAROLIEiJ_G0023173	Rbm17	100	81.043	Mus_caroli
ENSMZEG00005015179	rbm17	100	81.043	ENSMUSG00000037197	Rbm17	100	81.043	Mus_musculus
ENSMZEG00005015179	rbm17	100	81.043	MGP_PahariEiJ_G0019233	Rbm17	100	81.043	Mus_pahari
ENSMZEG00005015179	rbm17	100	81.043	MGP_SPRETEiJ_G0024091	Rbm17	100	81.043	Mus_spretus
ENSMZEG00005015179	rbm17	86	78.356	ENSMPUG00000016359	RBM17	96	78.356	Mustela_putorius_furo
ENSMZEG00005015179	rbm17	100	76.066	ENSMLUG00000025709	-	100	74.882	Myotis_lucifugus
ENSMZEG00005015179	rbm17	100	78.960	ENSMLUG00000002302	-	100	78.960	Myotis_lucifugus
ENSMZEG00005015179	rbm17	100	80.806	ENSNGAG00000000741	Rbm17	100	80.806	Nannospalax_galili
ENSMZEG00005015179	rbm17	100	57.538	ENSNGAG00000000663	-	89	71.277	Nannospalax_galili
ENSMZEG00005015179	rbm17	100	94.710	ENSNBRG00000018148	rbm17	100	94.710	Neolamprologus_brichardi
ENSMZEG00005015179	rbm17	100	80.332	ENSNLEG00000033350	RBM17	100	86.290	Nomascus_leucogenys
ENSMZEG00005015179	rbm17	100	75.355	ENSMEUG00000011347	RBM17	100	75.355	Notamacropus_eugenii
ENSMZEG00005015179	rbm17	100	69.951	ENSOPRG00000002993	RBM17	100	69.905	Ochotona_princeps
ENSMZEG00005015179	rbm17	100	80.615	ENSODEG00000004393	RBM17	100	80.615	Octodon_degus
ENSMZEG00005015179	rbm17	97	63.333	ENSODEG00000007286	-	99	62.899	Octodon_degus
ENSMZEG00005015179	rbm17	100	95.933	ENSONIG00000011838	rbm17	100	95.933	Oreochromis_niloticus
ENSMZEG00005015179	rbm17	100	79.621	ENSOANG00000015455	RBM17	100	80.095	Ornithorhynchus_anatinus
ENSMZEG00005015179	rbm17	100	93.112	ENSORLG00000028798	rbm17	100	93.112	Oryzias_latipes
ENSMZEG00005015179	rbm17	100	93.112	ENSORLG00020004593	rbm17	100	91.940	Oryzias_latipes_hni
ENSMZEG00005015179	rbm17	100	93.349	ENSORLG00015000033	rbm17	99	93.349	Oryzias_latipes_hsok
ENSMZEG00005015179	rbm17	100	92.399	ENSOMEG00000012060	rbm17	100	92.500	Oryzias_melastigma
ENSMZEG00005015179	rbm17	100	80.806	ENSOGAG00000015687	RBM17	100	80.806	Otolemur_garnettii
ENSMZEG00005015179	rbm17	100	80.569	ENSOARG00000012975	RBM17	100	80.569	Ovis_aries
ENSMZEG00005015179	rbm17	100	80.332	ENSPPAG00000032347	RBM17	98	88.430	Pan_paniscus
ENSMZEG00005015179	rbm17	100	80.569	ENSPPRG00000010706	RBM17	100	80.569	Panthera_pardus
ENSMZEG00005015179	rbm17	100	80.569	ENSPTIG00000007596	RBM17	100	80.569	Panthera_tigris_altaica
ENSMZEG00005015179	rbm17	100	80.332	ENSPTRG00000002265	RBM17	98	88.430	Pan_troglodytes
ENSMZEG00005015179	rbm17	100	80.402	ENSPANG00000023425	RBM17	97	89.167	Papio_anubis
ENSMZEG00005015179	rbm17	100	80.751	ENSPKIG00000025526	rbm17	100	80.328	Paramormyrops_kingsleyae
ENSMZEG00005015179	rbm17	100	79.699	ENSPKIG00000005048	-	100	80.000	Paramormyrops_kingsleyae
ENSMZEG00005015179	rbm17	100	79.765	ENSPSIG00000012332	RBM17	100	79.765	Pelodiscus_sinensis
ENSMZEG00005015179	rbm17	100	86.750	ENSPMGG00000007980	rbm17	100	86.750	Periophthalmus_magnuspinnatus
ENSMZEG00005015179	rbm17	100	80.806	ENSPEMG00000014320	Rbm17	100	80.806	Peromyscus_maniculatus_bairdii
ENSMZEG00005015179	rbm17	100	80.189	ENSPCIG00000019260	-	100	80.189	Phascolarctos_cinereus
ENSMZEG00005015179	rbm17	100	91.686	ENSPFOG00000013271	rbm17	100	91.686	Poecilia_formosa
ENSMZEG00005015179	rbm17	100	91.211	ENSPLAG00000004455	rbm17	100	91.211	Poecilia_latipinna
ENSMZEG00005015179	rbm17	100	91.686	ENSPMEG00000014864	rbm17	100	91.686	Poecilia_mexicana
ENSMZEG00005015179	rbm17	100	91.905	ENSPREG00000015589	rbm17	100	91.905	Poecilia_reticulata
ENSMZEG00005015179	rbm17	100	80.332	ENSPPYG00000002067	RBM17	100	80.332	Pongo_abelii
ENSMZEG00005015179	rbm17	99	60.476	ENSPPYG00000019881	-	100	59.762	Pongo_abelii
ENSMZEG00005015179	rbm17	81	56.686	ENSPPYG00000019042	-	100	56.923	Pongo_abelii
ENSMZEG00005015179	rbm17	100	73.223	ENSPCAG00000016879	RBM17	100	73.223	Procavia_capensis
ENSMZEG00005015179	rbm17	100	82.412	ENSPCOG00000027881	RBM17	100	82.412	Propithecus_coquereli
ENSMZEG00005015179	rbm17	100	72.038	ENSPVAG00000015499	RBM17	100	71.891	Pteropus_vampyrus
ENSMZEG00005015179	rbm17	100	88.665	ENSPNYG00000015274	rbm17	100	88.665	Pundamilia_nyererei
ENSMZEG00005015179	rbm17	100	84.123	ENSPNAG00000030046	rbm17	100	85.545	Pygocentrus_nattereri
ENSMZEG00005015179	rbm17	100	80.806	ENSRNOG00000018767	Rbm17	100	80.806	Rattus_norvegicus
ENSMZEG00005015179	rbm17	100	80.500	ENSRBIG00000043727	RBM17	97	89.167	Rhinopithecus_bieti
ENSMZEG00005015179	rbm17	100	80.402	ENSRROG00000044142	RBM17	97	89.167	Rhinopithecus_roxellana
ENSMZEG00005015179	rbm17	100	80.905	ENSSBOG00000031661	-	93	90.435	Saimiri_boliviensis_boliviensis
ENSMZEG00005015179	rbm17	100	71.801	ENSSBOG00000023653	-	100	70.379	Saimiri_boliviensis_boliviensis
ENSMZEG00005015179	rbm17	100	81.043	ENSSHAG00000012480	-	100	81.043	Sarcophilus_harrisii
ENSMZEG00005015179	rbm17	100	80.796	ENSSFOG00015009892	rbm17	100	82.201	Scleropages_formosus
ENSMZEG00005015179	rbm17	100	89.421	ENSSMAG00000012368	rbm17	100	89.673	Scophthalmus_maximus
ENSMZEG00005015179	rbm17	100	92.443	ENSSDUG00000015015	rbm17	100	92.443	Seriola_dumerili
ENSMZEG00005015179	rbm17	100	92.443	ENSSLDG00000014486	rbm17	100	92.443	Seriola_lalandi_dorsalis
ENSMZEG00005015179	rbm17	50	80.000	ENSSARG00000001792	-	79	80.000	Sorex_araneus
ENSMZEG00005015179	rbm17	99	80.760	ENSSPUG00000001036	RBM17	99	80.760	Sphenodon_punctatus
ENSMZEG00005015179	rbm17	100	95.962	ENSSPAG00000002338	rbm17	100	95.962	Stegastes_partitus
ENSMZEG00005015179	rbm17	100	80.332	ENSSSCG00000011134	RBM17	100	80.332	Sus_scrofa
ENSMZEG00005015179	rbm17	100	81.043	ENSTGUG00000002013	RBM17	100	81.043	Taeniopygia_guttata
ENSMZEG00005015179	rbm17	100	90.952	ENSTRUG00000010698	rbm17	100	90.952	Takifugu_rubripes
ENSMZEG00005015179	rbm17	100	90.000	ENSTNIG00000006892	rbm17	100	90.000	Tetraodon_nigroviridis
ENSMZEG00005015179	rbm17	100	63.210	ENSTBEG00000014686	RBM17	100	64.444	Tupaia_belangeri
ENSMZEG00005015179	rbm17	90	79.528	ENSTTRG00000001344	RBM17	100	79.528	Tursiops_truncatus
ENSMZEG00005015179	rbm17	100	81.203	ENSUAMG00000009499	RBM17	100	81.203	Ursus_americanus
ENSMZEG00005015179	rbm17	100	80.905	ENSUMAG00000012237	RBM17	100	80.905	Ursus_maritimus
ENSMZEG00005015179	rbm17	87	88.148	ENSVPAG00000005497	RBM17	86	88.148	Vicugna_pacos
ENSMZEG00005015179	rbm17	100	80.653	ENSVVUG00000006780	RBM17	100	80.653	Vulpes_vulpes
ENSMZEG00005015179	rbm17	99	77.088	ENSXETG00000018123	rbm17	100	76.850	Xenopus_tropicalis
ENSMZEG00005015179	rbm17	100	91.905	ENSXMAG00000008674	rbm17	100	92.143	Xiphophorus_maculatus