EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005015594 (Gene tree)
Gene ID: 101474237
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 4904 bases
Position: chrLG7:33933362-33938265
Accession: 101474237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005020785	zf-C2H2	PF00096.26	3.7e-25	1	5
ENSMZEP00005020785	zf-C2H2	PF00096.26	3.7e-25	2	5
ENSMZEP00005020785	zf-C2H2	PF00096.26	3.7e-25	3	5
ENSMZEP00005020785	zf-C2H2	PF00096.26	3.7e-25	4	5
ENSMZEP00005020785	zf-C2H2	PF00096.26	3.7e-25	5	5
ENSMZEP00005020785	zf-met	PF12874.7	1.6e-07	1	2
ENSMZEP00005020785	zf-met	PF12874.7	1.6e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005021468	-	1839	XM_004538434	ENSMZEP00005020785	323 (aa)	XP_004538491	UPI000D32729A

Gene Model

Click here to download ENSMZEG00005015594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005015594's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005015594	gfi1b	99	78.116	ENSAPOG00000001296	gfi1b	99	78.116	Acanthochromis_polyacanthus
ENSMZEG00005015594	gfi1b	100	75.684	ENSACIG00000002190	gfi1b	100	75.684	Amphilophus_citrinellus
ENSMZEG00005015594	gfi1b	99	77.812	ENSAOCG00000021187	gfi1b	99	77.812	Amphiprion_ocellaris
ENSMZEG00005015594	gfi1b	99	78.419	ENSAPEG00000016196	gfi1b	99	78.419	Amphiprion_percula
ENSMZEG00005015594	gfi1b	99	78.354	ENSATEG00000002534	gfi1b	99	78.354	Anabas_testudineus
ENSMZEG00005015594	gfi1b	99	58.944	ENSAPLG00000003373	GFI1B	99	58.944	Anas_platyrhynchos
ENSMZEG00005015594	gfi1b	100	99.381	ENSACLG00000027053	gfi1b	100	99.381	Astatotilapia_calliptera
ENSMZEG00005015594	gfi1b	99	67.857	ENSAMXG00000037544	GFI1B	99	67.857	Astyanax_mexicanus
ENSMZEG00005015594	gfi1b	99	56.119	ENSCAPG00000010404	GFI1B	99	56.119	Cavia_aperea
ENSMZEG00005015594	gfi1b	99	55.840	ENSCPBG00000021186	GFI1B	99	55.840	Chrysemys_picta_bellii
ENSMZEG00005015594	gfi1b	99	73.556	ENSCSEG00000001315	gfi1b	99	73.556	Cynoglossus_semilaevis
ENSMZEG00005015594	gfi1b	99	70.000	ENSCVAG00000017168	gfi1b	99	70.000	Cyprinodon_variegatus
ENSMZEG00005015594	gfi1b	99	67.456	ENSDARG00000079947	gfi1b	99	82.627	Danio_rerio
ENSMZEG00005015594	gfi1b	63	51.724	ENSEEUG00000012609	-	89	51.724	Erinaceus_europaeus
ENSMZEG00005015594	gfi1b	99	68.750	ENSELUG00000016933	gfi1b	99	68.750	Esox_lucius
ENSMZEG00005015594	gfi1b	99	53.804	ENSFALG00000001479	GFI1B	99	53.804	Ficedula_albicollis
ENSMZEG00005015594	gfi1b	99	74.924	ENSFHEG00000015138	gfi1b	99	74.924	Fundulus_heteroclitus
ENSMZEG00005015594	gfi1b	73	80.992	ENSGMOG00000019123	gfi1b	91	80.992	Gadus_morhua
ENSMZEG00005015594	gfi1b	99	57.018	ENSGALG00000003478	GFI1B	99	57.018	Gallus_gallus
ENSMZEG00005015594	gfi1b	75	86.722	ENSGAFG00000003059	gfi1b	99	86.722	Gambusia_affinis
ENSMZEG00005015594	gfi1b	99	70.455	ENSGACG00000018134	gfi1b	99	70.455	Gasterosteus_aculeatus
ENSMZEG00005015594	gfi1b	99	57.647	ENSGAGG00000021327	GFI1B	99	57.647	Gopherus_agassizii
ENSMZEG00005015594	gfi1b	100	99.381	ENSHBUG00000005451	gfi1b	100	99.381	Haplochromis_burtoni
ENSMZEG00005015594	gfi1b	99	71.254	ENSHCOG00000013713	gfi1b	99	71.254	Hippocampus_comes
ENSMZEG00005015594	gfi1b	99	69.369	ENSIPUG00000012769	gfi1b	99	69.369	Ictalurus_punctatus
ENSMZEG00005015594	gfi1b	99	50.000	ENSJJAG00000016355	Gfi1b	99	50.000	Jaculus_jaculus
ENSMZEG00005015594	gfi1b	99	73.252	ENSKMAG00000016047	gfi1b	99	73.252	Kryptolebias_marmoratus
ENSMZEG00005015594	gfi1b	99	75.380	ENSLBEG00000020297	gfi1b	99	75.684	Labrus_bergylta
ENSMZEG00005015594	gfi1b	99	60.303	ENSLACG00000012207	GFI1B	99	60.303	Latimeria_chalumnae
ENSMZEG00005015594	gfi1b	99	64.583	ENSLOCG00000005750	gfi1b	99	64.583	Lepisosteus_oculatus
ENSMZEG00005015594	gfi1b	99	56.047	ENSLAFG00000022367	GFI1B	99	56.047	Loxodonta_africana
ENSMZEG00005015594	gfi1b	100	78.659	ENSMAMG00000003040	gfi1b	99	78.899	Mastacembelus_armatus
ENSMZEG00005015594	gfi1b	99	57.310	ENSMGAG00000006129	GFI1B	99	57.310	Meleagris_gallopavo
ENSMZEG00005015594	gfi1b	99	77.134	ENSMMOG00000011764	gfi1b	99	77.134	Mola_mola
ENSMZEG00005015594	gfi1b	99	49.606	ENSMODG00000012600	GFI1B	99	49.606	Monodelphis_domestica
ENSMZEG00005015594	gfi1b	99	76.758	ENSMALG00000004034	gfi1b	99	76.758	Monopterus_albus
ENSMZEG00005015594	gfi1b	99	56.805	ENSNGAG00000003333	Gfi1b	99	56.805	Nannospalax_galili
ENSMZEG00005015594	gfi1b	52	66.667	ENSNBRG00000012376	-	100	66.667	Neolamprologus_brichardi
ENSMZEG00005015594	gfi1b	100	96.960	ENSNBRG00000012391	gfi1b	100	96.960	Neolamprologus_brichardi
ENSMZEG00005015594	gfi1b	100	95.745	ENSONIG00000013011	gfi1b	100	95.745	Oreochromis_niloticus
ENSMZEG00005015594	gfi1b	99	58.806	ENSOANG00000014723	GFI1B	99	58.806	Ornithorhynchus_anatinus
ENSMZEG00005015594	gfi1b	99	55.963	ENSORLG00000014390	GFI1B	96	64.855	Oryzias_latipes
ENSMZEG00005015594	gfi1b	99	70.948	ENSORLG00020003719	GFI1B	99	70.948	Oryzias_latipes_hni
ENSMZEG00005015594	gfi1b	99	70.336	ENSORLG00015017142	gfi1b	99	70.336	Oryzias_latipes_hsok
ENSMZEG00005015594	gfi1b	99	71.254	ENSOMEG00000015149	GFI1B	99	71.254	Oryzias_melastigma
ENSMZEG00005015594	gfi1b	99	57.567	ENSOGAG00000008879	GFI1B	99	57.864	Otolemur_garnettii
ENSMZEG00005015594	gfi1b	99	66.866	ENSPKIG00000007643	gfi1b	99	66.866	Paramormyrops_kingsleyae
ENSMZEG00005015594	gfi1b	99	55.966	ENSPSIG00000012112	GFI1B	99	55.966	Pelodiscus_sinensis
ENSMZEG00005015594	gfi1b	99	64.634	ENSPMGG00000006021	gfi1b	99	62.798	Periophthalmus_magnuspinnatus
ENSMZEG00005015594	gfi1b	99	49.326	ENSPCIG00000019724	GFI1B	99	49.326	Phascolarctos_cinereus
ENSMZEG00005015594	gfi1b	99	75.449	ENSPFOG00000003460	gfi1b	99	75.449	Poecilia_formosa
ENSMZEG00005015594	gfi1b	99	74.260	ENSPLAG00000017181	GFI1B	99	74.260	Poecilia_latipinna
ENSMZEG00005015594	gfi1b	99	76.829	ENSPLAG00000021960	GFI1B	99	76.829	Poecilia_latipinna
ENSMZEG00005015594	gfi1b	99	76.220	ENSPMEG00000001556	GFI1B	99	76.220	Poecilia_mexicana
ENSMZEG00005015594	gfi1b	99	76.220	ENSPMEG00000019220	gfi1b	99	76.220	Poecilia_mexicana
ENSMZEG00005015594	gfi1b	99	75.915	ENSPREG00000021718	gfi1b	99	75.915	Poecilia_reticulata
ENSMZEG00005015594	gfi1b	100	94.118	ENSPNYG00000018422	gfi1b	100	94.118	Pundamilia_nyererei
ENSMZEG00005015594	gfi1b	99	68.657	ENSPNAG00000021118	gfi1b	99	68.657	Pygocentrus_nattereri
ENSMZEG00005015594	gfi1b	99	46.381	ENSSHAG00000006462	GFI1B	99	46.381	Sarcophilus_harrisii
ENSMZEG00005015594	gfi1b	83	61.429	ENSSFOG00015011566	gfi1b	90	61.429	Scleropages_formosus
ENSMZEG00005015594	gfi1b	99	73.700	ENSSMAG00000015181	gfi1b	99	73.394	Scophthalmus_maximus
ENSMZEG00005015594	gfi1b	99	79.141	ENSSDUG00000011604	gfi1b	99	79.141	Seriola_dumerili
ENSMZEG00005015594	gfi1b	99	78.528	ENSSLDG00000013823	gfi1b	99	78.528	Seriola_lalandi_dorsalis
ENSMZEG00005015594	gfi1b	99	48.424	ENSSPUG00000016039	GFI1B	99	48.424	Sphenodon_punctatus
ENSMZEG00005015594	gfi1b	99	76.758	ENSSPAG00000022914	gfi1b	99	76.758	Stegastes_partitus
ENSMZEG00005015594	gfi1b	51	91.150	ENSTGUG00000005282	-	99	91.150	Taeniopygia_guttata
ENSMZEG00005015594	gfi1b	99	74.006	ENSTRUG00000004525	gfi1b	99	74.006	Takifugu_rubripes
ENSMZEG00005015594	gfi1b	99	72.561	ENSTNIG00000003834	gfi1b	99	72.561	Tetraodon_nigroviridis
ENSMZEG00005015594	gfi1b	99	42.075	ENSTBEG00000014459	GFI1B	99	42.075	Tupaia_belangeri
ENSMZEG00005015594	gfi1b	99	57.185	ENSXETG00000006263	gfi1b	99	59.581	Xenopus_tropicalis
ENSMZEG00005015594	gfi1b	99	76.524	ENSXMAG00000027589	gfi1b	99	76.524	Xiphophorus_maculatus