EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005015681 (Gene tree)
Gene ID: 101472536
Gene Symbol: lyn
Alias: zgc:92124
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 13174 bases
Position: chrLG18:28687202-28700375
Accession: 101472536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005020893	Methyltransf_15	PF09445.10	2.8e-41	1	1
ENSMZEP00005020893	UPF0020	PF01170.18	2e-05	1	1
ENSMZEP00005020893	Met_10	PF02475.16	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005021579	-	2820	XM_004572948	ENSMZEP00005020893	778 (aa)	XP_004573005	-

Gene Model

Click here to download ENSMZEG00005015681's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005015681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005015681	lyn	69	58.217	ENSAPOG00000004321	-	99	58.042	Acanthochromis_polyacanthus
ENSMZEG00005015681	lyn	98	37.699	ENSAMEG00000001781	TGS1	98	37.207	Ailuropoda_melanoleuca
ENSMZEG00005015681	lyn	99	59.927	ENSAOCG00000022799	lyn	99	59.683	Amphiprion_ocellaris
ENSMZEG00005015681	lyn	81	61.968	ENSAPEG00000019723	TGS1	97	62.059	Amphiprion_percula
ENSMZEG00005015681	lyn	93	57.312	ENSATEG00000005927	lyn	92	57.312	Anabas_testudineus
ENSMZEG00005015681	lyn	76	38.393	ENSAPLG00000006073	-	94	38.626	Anas_platyrhynchos
ENSMZEG00005015681	lyn	99	36.404	ENSACAG00000017988	TGS1	92	35.826	Anolis_carolinensis
ENSMZEG00005015681	lyn	98	39.541	ENSANAG00000035525	TGS1	98	39.093	Aotus_nancymaae
ENSMZEG00005015681	lyn	100	99.743	ENSACLG00000000261	lyn	100	99.743	Astatotilapia_calliptera
ENSMZEG00005015681	lyn	98	44.095	ENSAMXG00000014086	lyn	91	54.167	Astyanax_mexicanus
ENSMZEG00005015681	lyn	98	37.742	ENSBTAG00000005898	TGS1	97	38.163	Bos_taurus
ENSMZEG00005015681	lyn	98	39.041	ENSCJAG00000016657	TGS1	97	38.453	Callithrix_jacchus
ENSMZEG00005015681	lyn	98	37.457	ENSCAFG00000007011	TGS1	98	37.866	Canis_familiaris
ENSMZEG00005015681	lyn	98	36.583	ENSCAFG00020015485	TGS1	98	36.737	Canis_lupus_dingo
ENSMZEG00005015681	lyn	98	36.395	ENSCHIG00000013976	TGS1	97	37.381	Capra_hircus
ENSMZEG00005015681	lyn	90	37.646	ENSCAPG00000013732	TGS1	93	37.308	Cavia_aperea
ENSMZEG00005015681	lyn	98	38.525	ENSCPOG00000009713	TGS1	98	38.470	Cavia_porcellus
ENSMZEG00005015681	lyn	98	37.302	ENSCCAG00000030476	TGS1	75	40.376	Cebus_capucinus
ENSMZEG00005015681	lyn	98	39.657	ENSCLAG00000009468	TGS1	98	37.915	Chinchilla_lanigera
ENSMZEG00005015681	lyn	98	35.584	ENSCHOG00000001462	TGS1	78	38.496	Choloepus_hoffmanni
ENSMZEG00005015681	lyn	99	36.925	ENSCPBG00000004958	TGS1	76	41.460	Chrysemys_picta_bellii
ENSMZEG00005015681	lyn	98	38.507	ENSCGRG00001019470	Tgs1	98	37.559	Cricetulus_griseus_chok1gshd
ENSMZEG00005015681	lyn	98	38.290	ENSCGRG00000008981	Tgs1	98	37.691	Cricetulus_griseus_crigri
ENSMZEG00005015681	lyn	99	44.753	ENSDARG00000107511	lyn	99	81.111	Danio_rerio
ENSMZEG00005015681	lyn	98	38.079	ENSDNOG00000008353	TGS1	98	36.824	Dasypus_novemcinctus
ENSMZEG00005015681	lyn	91	34.913	ENSEASG00005016371	TGS1	94	34.375	Equus_asinus_asinus
ENSMZEG00005015681	lyn	98	38.184	ENSECAG00000019399	TGS1	98	38.211	Equus_caballus
ENSMZEG00005015681	lyn	65	79.630	ENSEEUG00000001735	TGS1	65	79.630	Erinaceus_europaeus
ENSMZEG00005015681	lyn	100	45.943	ENSELUG00000012537	lyn	99	46.053	Esox_lucius
ENSMZEG00005015681	lyn	98	37.775	ENSFCAG00000011478	TGS1	76	41.518	Felis_catus
ENSMZEG00005015681	lyn	80	42.442	ENSFALG00000010249	TGS1	85	41.618	Ficedula_albicollis
ENSMZEG00005015681	lyn	98	37.661	ENSFDAG00000011405	TGS1	97	37.173	Fukomys_damarensis
ENSMZEG00005015681	lyn	80	40.374	ENSGAGG00000019590	TGS1	77	40.603	Gopherus_agassizii
ENSMZEG00005015681	lyn	73	94.637	ENSHBUG00000003518	lyn	100	94.637	Haplochromis_burtoni
ENSMZEG00005015681	lyn	99	52.130	ENSHCOG00000014161	lyn	99	52.315	Hippocampus_comes
ENSMZEG00005015681	lyn	93	47.321	ENSIPUG00000002294	tgs1	98	41.008	Ictalurus_punctatus
ENSMZEG00005015681	lyn	98	37.209	ENSSTOG00000009597	TGS1	76	41.766	Ictidomys_tridecemlineatus
ENSMZEG00005015681	lyn	99	56.166	ENSKMAG00000019371	-	99	55.678	Kryptolebias_marmoratus
ENSMZEG00005015681	lyn	99	55.995	ENSLBEG00000027341	-	99	55.817	Labrus_bergylta
ENSMZEG00005015681	lyn	99	37.315	ENSLACG00000008074	TGS1	99	36.538	Latimeria_chalumnae
ENSMZEG00005015681	lyn	99	41.726	ENSLOCG00000005492	lyn	97	44.928	Lepisosteus_oculatus
ENSMZEG00005015681	lyn	80	42.406	ENSLAFG00000015386	TGS1	76	41.256	Loxodonta_africana
ENSMZEG00005015681	lyn	98	38.393	ENSMLEG00000034807	TGS1	76	41.703	Mandrillus_leucophaeus
ENSMZEG00005015681	lyn	99	58.714	ENSMAMG00000009542	TGS1	99	58.591	Mastacembelus_armatus
ENSMZEG00005015681	lyn	98	38.634	ENSMAUG00000009875	Tgs1	98	38.308	Mesocricetus_auratus
ENSMZEG00005015681	lyn	98	37.485	ENSMICG00000011199	TGS1	76	40.862	Microcebus_murinus
ENSMZEG00005015681	lyn	98	38.293	ENSMOCG00000019560	Tgs1	76	41.916	Microtus_ochrogaster
ENSMZEG00005015681	lyn	75	79.730	ENSMMOG00000021495	lyn	96	80.734	Mola_mola
ENSMZEG00005015681	lyn	80	42.620	ENSMODG00000009174	TGS1	86	41.431	Monodelphis_domestica
ENSMZEG00005015681	lyn	90	60.241	ENSMALG00000021440	lyn	99	60.188	Monopterus_albus
ENSMZEG00005015681	lyn	98	39.085	MGP_CAROLIEiJ_G0025779	-	97	39.064	Mus_caroli
ENSMZEG00005015681	lyn	98	35.350	MGP_CAROLIEiJ_G0025780	-	58	63.265	Mus_caroli
ENSMZEG00005015681	lyn	98	38.479	ENSMUSG00000028233	Tgs1	97	38.498	Mus_musculus
ENSMZEG00005015681	lyn	98	39.064	MGP_PahariEiJ_G0023901	-	97	38.876	Mus_pahari
ENSMZEG00005015681	lyn	98	35.075	MGP_PahariEiJ_G0023902	-	97	35.088	Mus_pahari
ENSMZEG00005015681	lyn	98	38.940	MGP_SPRETEiJ_G0026727	-	97	38.002	Mus_spretus
ENSMZEG00005015681	lyn	91	33.293	ENSMPUG00000010475	TGS1	75	37.439	Mustela_putorius_furo
ENSMZEG00005015681	lyn	98	37.736	ENSNGAG00000019532	Tgs1	76	41.082	Nannospalax_galili
ENSMZEG00005015681	lyn	98	37.599	ENSNLEG00000001101	TGS1	50	50.569	Nomascus_leucogenys
ENSMZEG00005015681	lyn	90	38.163	ENSMEUG00000001697	TGS1	61	49.883	Notamacropus_eugenii
ENSMZEG00005015681	lyn	86	35.286	ENSODEG00000002948	TGS1	93	34.661	Octodon_degus
ENSMZEG00005015681	lyn	89	86.264	ENSONIG00000006339	lyn	99	86.264	Oreochromis_niloticus
ENSMZEG00005015681	lyn	80	43.594	ENSOANG00000021853	TGS1	84	42.731	Ornithorhynchus_anatinus
ENSMZEG00005015681	lyn	99	50.061	ENSORLG00000004299	lyn	96	49.877	Oryzias_latipes
ENSMZEG00005015681	lyn	99	46.690	ENSORLG00020004200	lyn	96	47.506	Oryzias_latipes_hni
ENSMZEG00005015681	lyn	90	50.270	ENSORLG00015007251	lyn	95	50.204	Oryzias_latipes_hsok
ENSMZEG00005015681	lyn	99	50.246	ENSOMEG00000020174	lyn	99	50.877	Oryzias_melastigma
ENSMZEG00005015681	lyn	98	37.615	ENSOGAG00000012572	TGS1	76	41.308	Otolemur_garnettii
ENSMZEG00005015681	lyn	98	36.878	ENSOARG00000014613	TGS1	97	37.352	Ovis_aries
ENSMZEG00005015681	lyn	98	37.486	ENSPPAG00000039058	TGS1	76	40.988	Pan_paniscus
ENSMZEG00005015681	lyn	98	37.714	ENSPPRG00000000677	TGS1	76	41.532	Panthera_pardus
ENSMZEG00005015681	lyn	98	37.643	ENSPTIG00000005122	TGS1	76	41.399	Panthera_tigris_altaica
ENSMZEG00005015681	lyn	98	37.259	ENSPTRG00000020262	TGS1	76	40.843	Pan_troglodytes
ENSMZEG00005015681	lyn	98	38.165	ENSPANG00000018910	TGS1	76	41.850	Papio_anubis
ENSMZEG00005015681	lyn	93	47.167	ENSPKIG00000005454	lyn	68	47.167	Paramormyrops_kingsleyae
ENSMZEG00005015681	lyn	99	37.597	ENSPSIG00000014983	TGS1	77	41.202	Pelodiscus_sinensis
ENSMZEG00005015681	lyn	59	72.764	ENSPMGG00000012711	lyn	72	80.556	Periophthalmus_magnuspinnatus
ENSMZEG00005015681	lyn	98	38.902	ENSPEMG00000007957	Tgs1	98	38.615	Peromyscus_maniculatus_bairdii
ENSMZEG00005015681	lyn	99	38.684	ENSPCIG00000016232	TGS1	97	37.729	Phascolarctos_cinereus
ENSMZEG00005015681	lyn	81	51.473	ENSPFOG00000001545	-	99	50.389	Poecilia_formosa
ENSMZEG00005015681	lyn	92	46.438	ENSPREG00000012261	-	99	45.672	Poecilia_reticulata
ENSMZEG00005015681	lyn	98	37.798	ENSPPYG00000018597	TGS1	76	41.126	Pongo_abelii
ENSMZEG00005015681	lyn	98	37.313	ENSPCAG00000000143	TGS1	98	36.974	Procavia_capensis
ENSMZEG00005015681	lyn	84	76.168	ENSPVAG00000016399	TGS1	85	76.168	Pteropus_vampyrus
ENSMZEG00005015681	lyn	95	97.333	ENSPNYG00000023004	lyn	92	97.333	Pundamilia_nyererei
ENSMZEG00005015681	lyn	98	45.189	ENSPNAG00000022249	lyn	98	44.553	Pygocentrus_nattereri
ENSMZEG00005015681	lyn	98	38.525	ENSRNOG00000008156	Tgs1	98	38.364	Rattus_norvegicus
ENSMZEG00005015681	lyn	98	38.052	ENSRROG00000035127	TGS1	83	34.150	Rhinopithecus_roxellana
ENSMZEG00005015681	lyn	94	36.458	ENSSBOG00000024469	TGS1	75	39.637	Saimiri_boliviensis_boliviensis
ENSMZEG00005015681	lyn	99	38.902	ENSSHAG00000012878	TGS1	97	37.962	Sarcophilus_harrisii
ENSMZEG00005015681	lyn	96	42.363	ENSSFOG00015001308	tgs1	96	42.267	Scleropages_formosus
ENSMZEG00005015681	lyn	99	59.032	ENSSMAG00000019469	lyn	99	59.740	Scophthalmus_maximus
ENSMZEG00005015681	lyn	66	87.556	ENSSLDG00000009024	lyn	90	87.946	Seriola_lalandi_dorsalis
ENSMZEG00005015681	lyn	96	55.063	ENSSPAG00000002170	lyn	97	55.640	Stegastes_partitus
ENSMZEG00005015681	lyn	88	35.006	ENSSSCG00000006251	TGS1	76	38.776	Sus_scrofa
ENSMZEG00005015681	lyn	96	37.545	ENSTGUG00000011050	TGS1	99	37.546	Taeniopygia_guttata
ENSMZEG00005015681	lyn	80	43.631	ENSTRUG00000009532	lyn	96	43.471	Takifugu_rubripes
ENSMZEG00005015681	lyn	90	48.187	ENSTNIG00000018133	lyn	98	47.900	Tetraodon_nigroviridis
ENSMZEG00005015681	lyn	82	79.630	ENSTBEG00000010953	TGS1	83	79.630	Tupaia_belangeri
ENSMZEG00005015681	lyn	80	41.557	ENSTTRG00000017239	TGS1	76	40.376	Tursiops_truncatus
ENSMZEG00005015681	lyn	91	34.841	ENSUMAG00000009761	TGS1	98	34.048	Ursus_maritimus
ENSMZEG00005015681	lyn	91	33.209	ENSVVUG00000017821	TGS1	98	34.304	Vulpes_vulpes
ENSMZEG00005015681	lyn	98	37.253	ENSXETG00000005648	tgs1	98	37.603	Xenopus_tropicalis