EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005015797 (Gene tree)
Gene ID: 101471286
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 6575 bases
Position: chrLG17:31289476-31296050
Accession: 101471286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005021048	tRNA_Me_trans	PF03054.16	7e-136	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005021740	-	2933	XM_004553925	ENSMZEP00005021048	416 (aa)	XP_004553982	UPI000329C893

Gene Model

Click here to download ENSMZEG00005015797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005015797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005015797	trmu	96	71.930	ENSG00000100416	TRMU	96	76.730	Homo_sapiens
ENSMZEG00005015797	trmu	100	88.489	ENSAPOG00000014458	trmu	100	88.489	Acanthochromis_polyacanthus
ENSMZEG00005015797	trmu	96	70.677	ENSAMEG00000003319	TRMU	96	70.677	Ailuropoda_melanoleuca
ENSMZEG00005015797	trmu	100	93.750	ENSACIG00000002101	trmu	100	93.750	Amphilophus_citrinellus
ENSMZEG00005015797	trmu	100	89.209	ENSAOCG00000013155	trmu	100	89.209	Amphiprion_ocellaris
ENSMZEG00005015797	trmu	100	88.969	ENSAPEG00000013350	trmu	100	88.969	Amphiprion_percula
ENSMZEG00005015797	trmu	100	84.856	ENSATEG00000007814	trmu	100	84.856	Anabas_testudineus
ENSMZEG00005015797	trmu	93	71.835	ENSAPLG00000016380	TRMU	98	71.835	Anas_platyrhynchos
ENSMZEG00005015797	trmu	95	71.392	ENSACAG00000007720	TRMU	95	71.392	Anolis_carolinensis
ENSMZEG00005015797	trmu	97	70.720	ENSANAG00000038053	TRMU	95	70.720	Aotus_nancymaae
ENSMZEG00005015797	trmu	100	99.760	ENSACLG00000005395	trmu	100	99.760	Astatotilapia_calliptera
ENSMZEG00005015797	trmu	98	79.218	ENSAMXG00000005282	trmu	99	79.218	Astyanax_mexicanus
ENSMZEG00005015797	trmu	95	71.285	ENSBTAG00000005595	TRMU	95	71.285	Bos_taurus
ENSMZEG00005015797	trmu	91	41.176	WBGene00007114	mttu-1	98	41.176	Caenorhabditis_elegans
ENSMZEG00005015797	trmu	96	69.925	ENSCJAG00000000198	TRMU	95	69.925	Callithrix_jacchus
ENSMZEG00005015797	trmu	96	70.677	ENSCAFG00000000779	TRMU	94	70.677	Canis_familiaris
ENSMZEG00005015797	trmu	96	70.677	ENSCAFG00020009184	TRMU	94	70.677	Canis_lupus_dingo
ENSMZEG00005015797	trmu	95	71.033	ENSCHIG00000017074	TRMU	95	71.033	Capra_hircus
ENSMZEG00005015797	trmu	97	70.968	ENSTSYG00000003853	TRMU	96	70.968	Carlito_syrichta
ENSMZEG00005015797	trmu	94	66.339	ENSCAPG00000013034	TRMU	96	66.339	Cavia_aperea
ENSMZEG00005015797	trmu	97	70.223	ENSCPOG00000020780	TRMU	96	70.223	Cavia_porcellus
ENSMZEG00005015797	trmu	99	68.269	ENSCCAG00000021641	TRMU	99	68.269	Cebus_capucinus
ENSMZEG00005015797	trmu	96	70.927	ENSCATG00000032800	TRMU	95	70.927	Cercocebus_atys
ENSMZEG00005015797	trmu	97	70.471	ENSCLAG00000017269	TRMU	96	70.471	Chinchilla_lanigera
ENSMZEG00005015797	trmu	96	70.927	ENSCSAG00000005279	TRMU	95	70.927	Chlorocebus_sabaeus
ENSMZEG00005015797	trmu	89	72.312	ENSCPBG00000011621	TRMU	93	72.312	Chrysemys_picta_bellii
ENSMZEG00005015797	trmu	95	47.103	ENSCING00000019371	-	97	47.103	Ciona_intestinalis
ENSMZEG00005015797	trmu	96	70.426	ENSCANG00000041645	TRMU	95	70.426	Colobus_angolensis_palliatus
ENSMZEG00005015797	trmu	97	69.727	ENSCGRG00001001739	Trmu	96	69.727	Cricetulus_griseus_chok1gshd
ENSMZEG00005015797	trmu	97	64.516	ENSCGRG00000002781	Trmu	96	64.516	Cricetulus_griseus_crigri
ENSMZEG00005015797	trmu	99	80.193	ENSCSEG00000012382	trmu	99	80.193	Cynoglossus_semilaevis
ENSMZEG00005015797	trmu	100	87.500	ENSCVAG00000001366	trmu	100	87.500	Cyprinodon_variegatus
ENSMZEG00005015797	trmu	100	74.519	ENSDARG00000043734	trmu	100	74.519	Danio_rerio
ENSMZEG00005015797	trmu	64	56.716	ENSDNOG00000047245	-	94	56.716	Dasypus_novemcinctus
ENSMZEG00005015797	trmu	96	71.429	ENSDORG00000007455	Trmu	97	71.429	Dipodomys_ordii
ENSMZEG00005015797	trmu	93	44.041	FBgn0040337	CG3021	95	44.041	Drosophila_melanogaster
ENSMZEG00005015797	trmu	94	56.743	ENSEBUG00000007454	trmu	100	55.043	Eptatretus_burgeri
ENSMZEG00005015797	trmu	96	71.930	ENSEASG00005021725	TRMU	95	71.930	Equus_asinus_asinus
ENSMZEG00005015797	trmu	96	71.930	ENSECAG00000000467	TRMU	95	71.930	Equus_caballus
ENSMZEG00005015797	trmu	68	53.521	ENSEEUG00000000074	-	68	53.521	Erinaceus_europaeus
ENSMZEG00005015797	trmu	100	79.616	ENSELUG00000009464	trmu	99	81.793	Esox_lucius
ENSMZEG00005015797	trmu	96	71.429	ENSFCAG00000006533	TRMU	95	71.429	Felis_catus
ENSMZEG00005015797	trmu	89	71.842	ENSFALG00000010035	TRMU	96	71.842	Ficedula_albicollis
ENSMZEG00005015797	trmu	90	69.519	ENSFDAG00000017472	TRMU	95	69.519	Fukomys_damarensis
ENSMZEG00005015797	trmu	100	87.260	ENSFHEG00000003162	trmu	100	87.260	Fundulus_heteroclitus
ENSMZEG00005015797	trmu	97	73.219	ENSGMOG00000001323	trmu	100	73.219	Gadus_morhua
ENSMZEG00005015797	trmu	96	72.727	ENSGALG00000031922	TRMU	96	72.727	Gallus_gallus
ENSMZEG00005015797	trmu	99	88.049	ENSGAFG00000013331	trmu	98	88.049	Gambusia_affinis
ENSMZEG00005015797	trmu	100	85.343	ENSGACG00000019024	trmu	100	85.343	Gasterosteus_aculeatus
ENSMZEG00005015797	trmu	96	71.679	ENSGGOG00000000203	TRMU	95	71.679	Gorilla_gorilla
ENSMZEG00005015797	trmu	100	99.279	ENSHBUG00000023421	trmu	100	99.279	Haplochromis_burtoni
ENSMZEG00005015797	trmu	97	69.403	ENSHGLG00000009278	TRMU	95	69.403	Heterocephalus_glaber_female
ENSMZEG00005015797	trmu	97	69.403	ENSHGLG00100018863	TRMU	95	69.403	Heterocephalus_glaber_male
ENSMZEG00005015797	trmu	99	84.783	ENSHCOG00000013459	trmu	99	84.783	Hippocampus_comes
ENSMZEG00005015797	trmu	96	78.697	ENSIPUG00000009785	trmu	98	78.697	Ictalurus_punctatus
ENSMZEG00005015797	trmu	97	70.720	ENSSTOG00000010993	TRMU	96	70.720	Ictidomys_tridecemlineatus
ENSMZEG00005015797	trmu	97	69.652	ENSJJAG00000000667	Trmu	96	69.652	Jaculus_jaculus
ENSMZEG00005015797	trmu	100	85.337	ENSKMAG00000008516	trmu	100	85.337	Kryptolebias_marmoratus
ENSMZEG00005015797	trmu	100	86.058	ENSLBEG00000018831	trmu	100	86.058	Labrus_bergylta
ENSMZEG00005015797	trmu	97	77.171	ENSLACG00000013713	TRMU	96	77.171	Latimeria_chalumnae
ENSMZEG00005015797	trmu	96	79.500	ENSLOCG00000016066	trmu	96	79.500	Lepisosteus_oculatus
ENSMZEG00005015797	trmu	96	63.433	ENSLAFG00000005129	TRMU	96	63.433	Loxodonta_africana
ENSMZEG00005015797	trmu	96	71.178	ENSMFAG00000039767	TRMU	95	71.178	Macaca_fascicularis
ENSMZEG00005015797	trmu	96	71.178	ENSMMUG00000000807	TRMU	95	71.178	Macaca_mulatta
ENSMZEG00005015797	trmu	96	71.178	ENSMNEG00000028164	TRMU	95	71.178	Macaca_nemestrina
ENSMZEG00005015797	trmu	96	70.927	ENSMLEG00000033884	TRMU	95	70.927	Mandrillus_leucophaeus
ENSMZEG00005015797	trmu	100	86.058	ENSMAMG00000004717	trmu	100	86.058	Mastacembelus_armatus
ENSMZEG00005015797	trmu	76	72.086	ENSMGAG00000007550	TRMU	95	72.086	Meleagris_gallopavo
ENSMZEG00005015797	trmu	96	69.674	ENSMAUG00000022282	Trmu	96	69.674	Mesocricetus_auratus
ENSMZEG00005015797	trmu	96	70.175	ENSMICG00000029046	TRMU	97	70.175	Microcebus_murinus
ENSMZEG00005015797	trmu	96	70.426	ENSMOCG00000014641	Trmu	96	70.426	Microtus_ochrogaster
ENSMZEG00005015797	trmu	100	83.173	ENSMMOG00000007229	trmu	100	83.173	Mola_mola
ENSMZEG00005015797	trmu	95	67.588	ENSMODG00000007433	TRMU	93	67.588	Monodelphis_domestica
ENSMZEG00005015797	trmu	100	85.817	ENSMALG00000007721	trmu	100	85.817	Monopterus_albus
ENSMZEG00005015797	trmu	99	68.127	MGP_CAROLIEiJ_G0020134	Trmu	99	68.127	Mus_caroli
ENSMZEG00005015797	trmu	99	68.357	ENSMUSG00000022386	Trmu	99	68.357	Mus_musculus
ENSMZEG00005015797	trmu	99	68.116	MGP_PahariEiJ_G0020139	Trmu	99	68.116	Mus_pahari
ENSMZEG00005015797	trmu	99	68.357	MGP_SPRETEiJ_G0021031	Trmu	99	68.357	Mus_spretus
ENSMZEG00005015797	trmu	97	69.383	ENSMPUG00000002523	TRMU	96	69.383	Mustela_putorius_furo
ENSMZEG00005015797	trmu	99	69.157	ENSNGAG00000005132	Trmu	99	69.157	Nannospalax_galili
ENSMZEG00005015797	trmu	100	98.798	ENSNBRG00000022690	trmu	100	98.798	Neolamprologus_brichardi
ENSMZEG00005015797	trmu	97	70.968	ENSNLEG00000015773	TRMU	96	70.968	Nomascus_leucogenys
ENSMZEG00005015797	trmu	79	58.410	ENSMEUG00000000216	TRMU	99	58.410	Notamacropus_eugenii
ENSMZEG00005015797	trmu	97	70.223	ENSODEG00000014745	TRMU	97	69.877	Octodon_degus
ENSMZEG00005015797	trmu	100	98.317	ENSONIG00000009821	trmu	100	98.317	Oreochromis_niloticus
ENSMZEG00005015797	trmu	93	64.781	ENSOANG00000001891	TRMU	98	64.781	Ornithorhynchus_anatinus
ENSMZEG00005015797	trmu	90	70.213	ENSOCUG00000003664	TRMU	94	69.036	Oryctolagus_cuniculus
ENSMZEG00005015797	trmu	99	83.051	ENSORLG00000019015	trmu	99	83.051	Oryzias_latipes
ENSMZEG00005015797	trmu	99	83.293	ENSORLG00020006830	trmu	99	83.293	Oryzias_latipes_hni
ENSMZEG00005015797	trmu	99	83.293	ENSORLG00015003907	trmu	99	83.293	Oryzias_latipes_hsok
ENSMZEG00005015797	trmu	55	89.956	ENSOMEG00000015541	trmu	83	89.956	Oryzias_melastigma
ENSMZEG00005015797	trmu	97	68.734	ENSOGAG00000008096	TRMU	97	68.734	Otolemur_garnettii
ENSMZEG00005015797	trmu	91	67.895	ENSOARG00000019475	TRMU	93	67.895	Ovis_aries
ENSMZEG00005015797	trmu	96	71.679	ENSPPAG00000033944	TRMU	95	71.679	Pan_paniscus
ENSMZEG00005015797	trmu	96	71.178	ENSPPRG00000004197	TRMU	95	71.178	Panthera_pardus
ENSMZEG00005015797	trmu	67	71.480	ENSPTIG00000014122	TRMU	97	73.106	Panthera_tigris_altaica
ENSMZEG00005015797	trmu	96	71.679	ENSPTRG00000014510	TRMU	95	71.679	Pan_troglodytes
ENSMZEG00005015797	trmu	95	71.139	ENSPANG00000023074	TRMU	97	67.945	Papio_anubis
ENSMZEG00005015797	trmu	100	77.163	ENSPKIG00000002849	trmu	100	77.163	Paramormyrops_kingsleyae
ENSMZEG00005015797	trmu	88	72.527	ENSPSIG00000013020	TRMU	95	72.527	Pelodiscus_sinensis
ENSMZEG00005015797	trmu	100	83.894	ENSPMGG00000004083	trmu	100	83.894	Periophthalmus_magnuspinnatus
ENSMZEG00005015797	trmu	100	68.269	ENSPEMG00000014007	Trmu	98	68.269	Peromyscus_maniculatus_bairdii
ENSMZEG00005015797	trmu	94	67.263	ENSPCIG00000009923	TRMU	93	66.835	Phascolarctos_cinereus
ENSMZEG00005015797	trmu	97	84.406	ENSPFOG00000008197	trmu	90	84.406	Poecilia_formosa
ENSMZEG00005015797	trmu	99	87.440	ENSPLAG00000008414	trmu	99	87.440	Poecilia_latipinna
ENSMZEG00005015797	trmu	100	87.740	ENSPMEG00000004326	trmu	100	87.740	Poecilia_mexicana
ENSMZEG00005015797	trmu	99	87.681	ENSPREG00000007980	trmu	99	87.681	Poecilia_reticulata
ENSMZEG00005015797	trmu	99	70.120	ENSPPYG00000011949	TRMU	98	70.120	Pongo_abelii
ENSMZEG00005015797	trmu	93	63.049	ENSPCAG00000013462	TRMU	99	63.049	Procavia_capensis
ENSMZEG00005015797	trmu	96	69.674	ENSPCOG00000016539	TRMU	96	69.674	Propithecus_coquereli
ENSMZEG00005015797	trmu	96	65.414	ENSPVAG00000013202	TRMU	96	65.414	Pteropus_vampyrus
ENSMZEG00005015797	trmu	100	99.279	ENSPNYG00000005629	trmu	100	99.279	Pundamilia_nyererei
ENSMZEG00005015797	trmu	100	78.846	ENSPNAG00000006339	trmu	97	78.846	Pygocentrus_nattereri
ENSMZEG00005015797	trmu	97	68.983	ENSRNOG00000016465	Trmu	97	68.983	Rattus_norvegicus
ENSMZEG00005015797	trmu	96	69.925	ENSRBIG00000038973	TRMU	95	69.925	Rhinopithecus_bieti
ENSMZEG00005015797	trmu	96	70.175	ENSRROG00000004267	TRMU	95	70.175	Rhinopithecus_roxellana
ENSMZEG00005015797	trmu	94	33.172	YDL033C	SLM3	94	33.172	Saccharomyces_cerevisiae
ENSMZEG00005015797	trmu	99	68.750	ENSSBOG00000030184	TRMU	99	68.750	Saimiri_boliviensis_boliviensis
ENSMZEG00005015797	trmu	91	75.462	ENSSFOG00015020664	trmu	99	75.462	Scleropages_formosus
ENSMZEG00005015797	trmu	100	87.260	ENSSMAG00000019450	trmu	100	87.260	Scophthalmus_maximus
ENSMZEG00005015797	trmu	100	88.702	ENSSDUG00000011913	trmu	100	88.702	Seriola_dumerili
ENSMZEG00005015797	trmu	100	88.462	ENSSLDG00000011684	trmu	100	88.462	Seriola_lalandi_dorsalis
ENSMZEG00005015797	trmu	99	60.194	ENSSPUG00000017123	TRMU	96	60.194	Sphenodon_punctatus
ENSMZEG00005015797	trmu	100	86.058	ENSSPAG00000021875	trmu	100	86.058	Stegastes_partitus
ENSMZEG00005015797	trmu	97	70.223	ENSSSCG00000000007	TRMU	96	70.223	Sus_scrofa
ENSMZEG00005015797	trmu	89	73.458	ENSTGUG00000003663	-	100	73.458	Taeniopygia_guttata
ENSMZEG00005015797	trmu	99	85.230	ENSTRUG00000001231	trmu	100	85.230	Takifugu_rubripes
ENSMZEG00005015797	trmu	99	84.337	ENSTNIG00000010484	trmu	98	84.337	Tetraodon_nigroviridis
ENSMZEG00005015797	trmu	72	55.000	ENSTBEG00000011276	-	77	55.000	Tupaia_belangeri
ENSMZEG00005015797	trmu	96	71.930	ENSTTRG00000004160	TRMU	95	71.930	Tursiops_truncatus
ENSMZEG00005015797	trmu	70	72.355	ENSUAMG00000024825	TRMU	98	72.355	Ursus_americanus
ENSMZEG00005015797	trmu	97	58.065	ENSUMAG00000019079	TRMU	97	72.374	Ursus_maritimus
ENSMZEG00005015797	trmu	53	61.644	ENSVPAG00000000685	-	100	61.644	Vicugna_pacos
ENSMZEG00005015797	trmu	96	69.925	ENSVVUG00000024963	TRMU	95	69.925	Vulpes_vulpes
ENSMZEG00005015797	trmu	96	74.314	ENSXETG00000023304	trmu	94	74.314	Xenopus_tropicalis
ENSMZEG00005015797	trmu	99	85.851	ENSXCOG00000015105	trmu	99	85.851	Xiphophorus_couchianus
ENSMZEG00005015797	trmu	99	88.406	ENSXMAG00000006697	trmu	99	88.406	Xiphophorus_maculatus