EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005015815 (Gene tree)
Gene ID: 101467053
Gene Symbol: smg5 (1 of many)
Alias: zgc:113841
Full Name: protein SMG5
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 20478 bases
Position: chrLG11:28342621-28363098
Accession: 101467053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005021081	EST1	PF10374.9	4e-24	1	1
ENSMZEP00005021081	EST1_DNA_bind	PF10373.9	7.5e-41	1	1
ENSMZEP00005021081	PIN_4	PF13638.6	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005021775	-	3039	XM_004568569	ENSMZEP00005021081	1012 (aa)	XP_004568626	-

Gene Model

Click here to download ENSMZEG00005015815's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005015815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005015815	smg5	99	64.504	ENSG00000198952	SMG5	99	63.645	Homo_sapiens
ENSMZEG00005015815	smg5	99	85.561	ENSAPOG00000019690	smg5	99	85.463	Acanthochromis_polyacanthus
ENSMZEG00005015815	smg5	98	62.220	ENSAMEG00000014458	SMG5	100	61.882	Ailuropoda_melanoleuca
ENSMZEG00005015815	smg5	100	88.878	ENSACIG00000001353	smg5	100	88.781	Amphilophus_citrinellus
ENSMZEG00005015815	smg5	96	85.204	ENSAOCG00000019483	smg5	100	81.422	Amphiprion_ocellaris
ENSMZEG00005015815	smg5	98	85.800	ENSAPEG00000022949	smg5	98	85.400	Amphiprion_percula
ENSMZEG00005015815	smg5	100	83.111	ENSATEG00000005348	smg5	100	83.111	Anabas_testudineus
ENSMZEG00005015815	smg5	98	63.410	ENSAPLG00000010263	SMG5	100	62.824	Anas_platyrhynchos
ENSMZEG00005015815	smg5	99	64.633	ENSANAG00000032899	SMG5	99	63.454	Aotus_nancymaae
ENSMZEG00005015815	smg5	100	93.255	ENSACLG00000009311	smg5	100	93.255	Astatotilapia_calliptera
ENSMZEG00005015815	smg5	99	73.357	ENSAMXG00000024616	smg5	100	73.177	Astyanax_mexicanus
ENSMZEG00005015815	smg5	99	38.580	ENSBTAG00000021747	-	99	38.314	Bos_taurus
ENSMZEG00005015815	smg5	99	64.115	ENSBTAG00000009435	SMG5	99	62.892	Bos_taurus
ENSMZEG00005015815	smg5	99	64.504	ENSCJAG00000005684	SMG5	99	63.454	Callithrix_jacchus
ENSMZEG00005015815	smg5	99	63.092	ENSCAFG00000016839	SMG5	99	63.619	Canis_familiaris
ENSMZEG00005015815	smg5	99	63.092	ENSCAFG00020006061	SMG5	99	63.619	Canis_lupus_dingo
ENSMZEG00005015815	smg5	99	64.914	ENSCHIG00000007709	SMG5	99	63.238	Capra_hircus
ENSMZEG00005015815	smg5	99	38.335	ENSCHIG00000006323	-	99	38.238	Capra_hircus
ENSMZEG00005015815	smg5	99	65.172	ENSTSYG00000004099	SMG5	99	63.118	Carlito_syrichta
ENSMZEG00005015815	smg5	94	49.796	ENSCAPG00000003631	SMG5	100	50.355	Cavia_aperea
ENSMZEG00005015815	smg5	99	64.088	ENSCPOG00000015696	SMG5	99	63.905	Cavia_porcellus
ENSMZEG00005015815	smg5	99	64.272	ENSCCAG00000027409	SMG5	99	63.454	Cebus_capucinus
ENSMZEG00005015815	smg5	99	64.695	ENSCATG00000030539	SMG5	99	63.740	Cercocebus_atys
ENSMZEG00005015815	smg5	99	63.801	ENSCLAG00000003983	SMG5	99	63.188	Chinchilla_lanigera
ENSMZEG00005015815	smg5	99	64.695	ENSCSAG00000002120	SMG5	99	63.740	Chlorocebus_sabaeus
ENSMZEG00005015815	smg5	53	75.812	ENSCHOG00000008741	-	56	75.812	Choloepus_hoffmanni
ENSMZEG00005015815	smg5	93	63.400	ENSCPBG00000025848	SMG5	100	62.512	Chrysemys_picta_bellii
ENSMZEG00005015815	smg5	92	31.954	ENSCING00000008706	-	97	32.383	Ciona_intestinalis
ENSMZEG00005015815	smg5	99	62.226	ENSCANG00000029208	SMG5	99	61.275	Colobus_angolensis_palliatus
ENSMZEG00005015815	smg5	99	64.203	ENSCGRG00001006336	Smg5	99	63.820	Cricetulus_griseus_chok1gshd
ENSMZEG00005015815	smg5	98	64.160	ENSCGRG00000005111	Smg5	100	63.734	Cricetulus_griseus_crigri
ENSMZEG00005015815	smg5	100	79.637	ENSCSEG00000014220	smg5	100	79.828	Cynoglossus_semilaevis
ENSMZEG00005015815	smg5	99	75.781	ENSCVAG00000000529	smg5	99	75.488	Cyprinodon_variegatus
ENSMZEG00005015815	smg5	99	71.644	ENSDARG00000041481	smg5	100	71.822	Danio_rerio
ENSMZEG00005015815	smg5	89	31.897	ENSDNOG00000039862	-	81	38.736	Dasypus_novemcinctus
ENSMZEG00005015815	smg5	99	61.818	ENSDNOG00000000051	SMG5	99	61.074	Dasypus_novemcinctus
ENSMZEG00005015815	smg5	99	64.695	ENSDORG00000010382	Smg5	99	63.083	Dipodomys_ordii
ENSMZEG00005015815	smg5	78	85.437	ENSETEG00000010336	SMG5	84	85.437	Echinops_telfairi
ENSMZEG00005015815	smg5	92	44.340	ENSEBUG00000003739	smg5	99	45.236	Eptatretus_burgeri
ENSMZEG00005015815	smg5	99	65.167	ENSEASG00005019122	SMG5	99	64.491	Equus_asinus_asinus
ENSMZEG00005015815	smg5	99	65.072	ENSECAG00000001389	SMG5	99	64.395	Equus_caballus
ENSMZEG00005015815	smg5	72	78.814	ENSEEUG00000012690	SMG5	75	77.465	Erinaceus_europaeus
ENSMZEG00005015815	smg5	99	77.101	ENSELUG00000012585	smg5	99	77.027	Esox_lucius
ENSMZEG00005015815	smg5	99	63.443	ENSFCAG00000011783	SMG5	99	63.549	Felis_catus
ENSMZEG00005015815	smg5	59	67.652	ENSFALG00000001166	-	96	66.831	Ficedula_albicollis
ENSMZEG00005015815	smg5	98	63.389	ENSFDAG00000017388	SMG5	100	62.902	Fukomys_damarensis
ENSMZEG00005015815	smg5	94	76.332	ENSFHEG00000013939	smg5	98	75.410	Fundulus_heteroclitus
ENSMZEG00005015815	smg5	99	72.081	ENSGMOG00000007310	smg5	100	72.937	Gadus_morhua
ENSMZEG00005015815	smg5	99	63.791	ENSGALG00000029918	-	99	63.060	Gallus_gallus
ENSMZEG00005015815	smg5	99	73.443	ENSGAFG00000021691	smg5	100	73.352	Gambusia_affinis
ENSMZEG00005015815	smg5	99	78.145	ENSGACG00000013142	smg5	100	77.877	Gasterosteus_aculeatus
ENSMZEG00005015815	smg5	100	63.790	ENSGAGG00000016131	SMG5	99	63.163	Gopherus_agassizii
ENSMZEG00005015815	smg5	99	64.824	ENSGGOG00000010932	SMG5	99	63.454	Gorilla_gorilla
ENSMZEG00005015815	smg5	100	92.174	ENSHBUG00000008654	smg5	100	92.174	Haplochromis_burtoni
ENSMZEG00005015815	smg5	99	63.506	ENSHGLG00000019152	SMG5	99	62.928	Heterocephalus_glaber_female
ENSMZEG00005015815	smg5	91	65.675	ENSHGLG00100015948	SMG5	99	65.016	Heterocephalus_glaber_male
ENSMZEG00005015815	smg5	87	83.373	ENSHCOG00000010229	smg5	94	83.133	Hippocampus_comes
ENSMZEG00005015815	smg5	99	72.507	ENSIPUG00000006624	Smg5	100	72.990	Ictalurus_punctatus
ENSMZEG00005015815	smg5	99	64.408	ENSSTOG00000001780	SMG5	99	63.870	Ictidomys_tridecemlineatus
ENSMZEG00005015815	smg5	99	64.061	ENSJJAG00000022763	Smg5	99	63.368	Jaculus_jaculus
ENSMZEG00005015815	smg5	99	78.933	ENSKMAG00000014586	smg5	100	79.396	Kryptolebias_marmoratus
ENSMZEG00005015815	smg5	99	84.884	ENSLBEG00000002145	smg5	99	84.593	Labrus_bergylta
ENSMZEG00005015815	smg5	99	57.598	ENSLACG00000010521	SMG5	99	57.343	Latimeria_chalumnae
ENSMZEG00005015815	smg5	99	63.410	ENSLAFG00000006241	SMG5	99	63.384	Loxodonta_africana
ENSMZEG00005015815	smg5	99	64.695	ENSMFAG00000045357	SMG5	99	63.740	Macaca_fascicularis
ENSMZEG00005015815	smg5	99	65.574	ENSMMUG00000000090	SMG5	99	63.977	Macaca_mulatta
ENSMZEG00005015815	smg5	99	64.599	ENSMNEG00000044425	SMG5	99	63.645	Macaca_nemestrina
ENSMZEG00005015815	smg5	99	59.221	ENSMLEG00000041192	SMG5	99	58.270	Mandrillus_leucophaeus
ENSMZEG00005015815	smg5	99	78.667	ENSMAMG00000010683	smg5	100	78.667	Mastacembelus_armatus
ENSMZEG00005015815	smg5	62	90.824	ENSMZEG00005016543	smg5	100	90.824	Maylandia_zebra
ENSMZEG00005015815	smg5	57	40.000	ENSMAUG00000000043	-	68	50.256	Mesocricetus_auratus
ENSMZEG00005015815	smg5	99	64.457	ENSMAUG00000010381	Smg5	99	63.436	Mesocricetus_auratus
ENSMZEG00005015815	smg5	99	64.909	ENSMICG00000002257	SMG5	99	63.636	Microcebus_murinus
ENSMZEG00005015815	smg5	50	44.894	ENSMOCG00000008423	-	73	48.848	Microtus_ochrogaster
ENSMZEG00005015815	smg5	99	63.183	ENSMOCG00000016590	Smg5	99	62.871	Microtus_ochrogaster
ENSMZEG00005015815	smg5	99	76.750	ENSMMOG00000017199	smg5	100	77.199	Mola_mola
ENSMZEG00005015815	smg5	79	35.062	ENSMODG00000004532	-	88	35.062	Monodelphis_domestica
ENSMZEG00005015815	smg5	76	33.590	ENSMODG00000010675	-	87	33.846	Monodelphis_domestica
ENSMZEG00005015815	smg5	74	33.503	ENSMODG00000004735	-	86	33.503	Monodelphis_domestica
ENSMZEG00005015815	smg5	88	65.904	ENSMODG00000016901	SMG5	98	64.897	Monodelphis_domestica
ENSMZEG00005015815	smg5	99	78.014	ENSMALG00000010375	smg5	100	77.571	Monopterus_albus
ENSMZEG00005015815	smg5	99	64.875	MGP_CAROLIEiJ_G0025163	Smg5	100	88.268	Mus_caroli
ENSMZEG00005015815	smg5	99	65.163	ENSMUSG00000001415	Smg5	99	88.268	Mus_musculus
ENSMZEG00005015815	smg5	99	65.230	MGP_PahariEiJ_G0026606	Smg5	100	88.827	Mus_pahari
ENSMZEG00005015815	smg5	99	64.779	MGP_SPRETEiJ_G0026104	Smg5	100	88.268	Mus_spretus
ENSMZEG00005015815	smg5	93	62.705	ENSMPUG00000004546	SMG5	100	61.523	Mustela_putorius_furo
ENSMZEG00005015815	smg5	99	64.976	ENSMLUG00000008518	SMG5	99	64.593	Myotis_lucifugus
ENSMZEG00005015815	smg5	99	64.135	ENSNGAG00000020706	Smg5	99	63.002	Nannospalax_galili
ENSMZEG00005015815	smg5	96	86.701	ENSNBRG00000004332	smg5	97	86.701	Neolamprologus_brichardi
ENSMZEG00005015815	smg5	99	64.544	ENSNLEG00000012439	SMG5	99	63.688	Nomascus_leucogenys
ENSMZEG00005015815	smg5	99	62.811	ENSMEUG00000012834	SMG5	99	62.118	Notamacropus_eugenii
ENSMZEG00005015815	smg5	99	64.593	ENSOPRG00000009152	SMG5	99	63.238	Ochotona_princeps
ENSMZEG00005015815	smg5	99	63.697	ENSODEG00000012237	SMG5	99	64.661	Octodon_degus
ENSMZEG00005015815	smg5	99	84.192	ENSONIG00000008632	smg5	100	84.636	Oreochromis_niloticus
ENSMZEG00005015815	smg5	90	35.714	ENSOCUG00000023338	-	98	35.501	Oryctolagus_cuniculus
ENSMZEG00005015815	smg5	98	64.516	ENSOCUG00000012886	SMG5	100	63.301	Oryctolagus_cuniculus
ENSMZEG00005015815	smg5	99	75.806	ENSORLG00000016239	smg5	100	77.102	Oryzias_latipes
ENSMZEG00005015815	smg5	99	79.537	ENSORLG00020013127	smg5	99	79.537	Oryzias_latipes_hni
ENSMZEG00005015815	smg5	99	78.942	ENSORLG00015019014	smg5	99	79.712	Oryzias_latipes_hsok
ENSMZEG00005015815	smg5	83	78.863	ENSOMEG00000021330	smg5	92	79.015	Oryzias_melastigma
ENSMZEG00005015815	smg5	99	63.208	ENSOGAG00000004966	SMG5	99	63.330	Otolemur_garnettii
ENSMZEG00005015815	smg5	99	64.593	ENSOARG00000005778	SMG5	99	63.238	Ovis_aries
ENSMZEG00005015815	smg5	99	38.543	ENSOARG00000011963	-	99	38.447	Ovis_aries
ENSMZEG00005015815	smg5	99	64.689	ENSPPAG00000011996	SMG5	99	63.645	Pan_paniscus
ENSMZEG00005015815	smg5	98	63.386	ENSPPRG00000011901	SMG5	100	62.941	Panthera_pardus
ENSMZEG00005015815	smg5	93	62.165	ENSPTIG00000007892	SMG5	95	61.538	Panthera_tigris_altaica
ENSMZEG00005015815	smg5	99	64.689	ENSPTRG00000049282	-	99	63.645	Pan_troglodytes
ENSMZEG00005015815	smg5	99	64.689	ENSPTRG00000023925	SMG5	99	63.645	Pan_troglodytes
ENSMZEG00005015815	smg5	99	64.695	ENSPANG00000011201	SMG5	99	63.740	Papio_anubis
ENSMZEG00005015815	smg5	100	73.594	ENSPKIG00000009402	smg5	100	73.499	Paramormyrops_kingsleyae
ENSMZEG00005015815	smg5	98	64.615	ENSPSIG00000015198	SMG5	100	63.698	Pelodiscus_sinensis
ENSMZEG00005015815	smg5	99	68.556	ENSPMGG00000010465	smg5	100	68.244	Periophthalmus_magnuspinnatus
ENSMZEG00005015815	smg5	59	40.357	ENSPEMG00000010022	-	68	50.000	Peromyscus_maniculatus_bairdii
ENSMZEG00005015815	smg5	99	64.841	ENSPEMG00000001819	Smg5	99	63.610	Peromyscus_maniculatus_bairdii
ENSMZEG00005015815	smg5	99	48.424	ENSPMAG00000000410	smg5	99	48.912	Petromyzon_marinus
ENSMZEG00005015815	smg5	99	64.012	ENSPCIG00000018938	SMG5	99	63.429	Phascolarctos_cinereus
ENSMZEG00005015815	smg5	99	78.234	ENSPFOG00000010191	smg5	100	77.788	Poecilia_formosa
ENSMZEG00005015815	smg5	99	78.055	ENSPLAG00000009332	smg5	100	77.788	Poecilia_latipinna
ENSMZEG00005015815	smg5	99	83.173	ENSPMEG00000014105	smg5	99	82.964	Poecilia_mexicana
ENSMZEG00005015815	smg5	99	78.304	ENSPREG00000017713	smg5	100	78.214	Poecilia_reticulata
ENSMZEG00005015815	smg5	99	64.504	ENSPPYG00000000723	SMG5	99	63.645	Pongo_abelii
ENSMZEG00005015815	smg5	75	75.556	ENSPCAG00000008412	SMG5	81	75.556	Procavia_capensis
ENSMZEG00005015815	smg5	99	65.010	ENSPCOG00000004741	SMG5	99	64.196	Propithecus_coquereli
ENSMZEG00005015815	smg5	99	57.047	ENSPVAG00000016748	SMG5	99	57.854	Pteropus_vampyrus
ENSMZEG00005015815	smg5	99	85.752	ENSPNYG00000013397	smg5	100	85.752	Pundamilia_nyererei
ENSMZEG00005015815	smg5	99	73.514	ENSPNAG00000028363	smg5	100	73.514	Pygocentrus_nattereri
ENSMZEG00005015815	smg5	99	65.005	ENSRNOG00000019590	Smg5	99	63.785	Rattus_norvegicus
ENSMZEG00005015815	smg5	99	64.695	ENSRBIG00000027428	SMG5	99	63.740	Rhinopithecus_bieti
ENSMZEG00005015815	smg5	99	64.599	ENSRROG00000030035	SMG5	99	63.645	Rhinopithecus_roxellana
ENSMZEG00005015815	smg5	99	64.163	ENSSBOG00000033339	SMG5	99	63.308	Saimiri_boliviensis_boliviensis
ENSMZEG00005015815	smg5	56	36.061	ENSSHAG00000000935	-	79	36.061	Sarcophilus_harrisii
ENSMZEG00005015815	smg5	98	63.153	ENSSHAG00000014163	SMG5	100	62.295	Sarcophilus_harrisii
ENSMZEG00005015815	smg5	75	36.317	ENSSHAG00000000561	-	85	36.061	Sarcophilus_harrisii
ENSMZEG00005015815	smg5	99	30.874	ENSSHAG00000009572	-	81	41.076	Sarcophilus_harrisii
ENSMZEG00005015815	smg5	100	74.856	ENSSFOG00015024175	smg5	100	74.663	Scleropages_formosus
ENSMZEG00005015815	smg5	99	78.742	ENSSMAG00000013059	smg5	100	79.469	Scophthalmus_maximus
ENSMZEG00005015815	smg5	99	80.617	ENSSDUG00000007122	smg5	100	80.106	Seriola_dumerili
ENSMZEG00005015815	smg5	99	80.813	ENSSLDG00000011418	smg5	100	80.654	Seriola_lalandi_dorsalis
ENSMZEG00005015815	smg5	91	58.811	ENSSARG00000012484	SMG5	99	57.884	Sorex_araneus
ENSMZEG00005015815	smg5	93	62.985	ENSSPUG00000002260	SMG5	100	62.698	Sphenodon_punctatus
ENSMZEG00005015815	smg5	99	84.721	ENSSPAG00000014266	smg5	98	84.525	Stegastes_partitus
ENSMZEG00005015815	smg5	99	64.818	ENSSSCG00000006490	-	100	62.729	Sus_scrofa
ENSMZEG00005015815	smg5	99	51.569	ENSSSCG00000039308	-	99	50.490	Sus_scrofa
ENSMZEG00005015815	smg5	99	65.589	ENSTGUG00000003748	-	99	64.117	Taeniopygia_guttata
ENSMZEG00005015815	smg5	99	75.924	ENSTRUG00000012580	smg5	99	75.996	Takifugu_rubripes
ENSMZEG00005015815	smg5	99	76.967	ENSTNIG00000010303	smg5	99	76.588	Tetraodon_nigroviridis
ENSMZEG00005015815	smg5	57	84.236	ENSTBEG00000002777	SMG5	58	84.236	Tupaia_belangeri
ENSMZEG00005015815	smg5	99	60.019	ENSTTRG00000001401	SMG5	99	59.579	Tursiops_truncatus
ENSMZEG00005015815	smg5	99	62.970	ENSUAMG00000013721	SMG5	99	62.739	Ursus_americanus
ENSMZEG00005015815	smg5	99	58.909	ENSUMAG00000018041	SMG5	99	59.223	Ursus_maritimus
ENSMZEG00005015815	smg5	91	63.861	ENSVPAG00000009446	SMG5	99	56.176	Vicugna_pacos
ENSMZEG00005015815	smg5	99	63.593	ENSVVUG00000005887	SMG5	99	63.391	Vulpes_vulpes
ENSMZEG00005015815	smg5	73	58.577	ENSXETG00000033791	SMG5	95	57.306	Xenopus_tropicalis
ENSMZEG00005015815	smg5	79	80.321	ENSXCOG00000004379	smg5	96	79.310	Xiphophorus_couchianus
ENSMZEG00005015815	smg5	99	80.692	ENSXMAG00000013499	smg5	99	80.829	Xiphophorus_maculatus