EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005015970 (Gene tree)
Gene ID: 101468747
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 10601 bases
Position: chrLG11:17397376-17407976
Accession: 101468747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005021277	PRP3	PF08572.10	1.9e-76	1	1
ENSMZEP00005021279	PRP3	PF08572.10	4.4e-75	1	1
ENSMZEP00005021279	PWI	PF01480.17	1.3e-11	1	1
ENSMZEP00005021277	PWI	PF01480.17	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005021981	-	1836	-	ENSMZEP00005021279	611 (aa)	-	-
ENSMZET00005021979	-	2929	XM_024804298	ENSMZEP00005021277	703 (aa)	XP_024660066	UPI00032A0114

Gene Model

Click here to download ENSMZEG00005015970's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005015970's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005015970	prpf3	99	70.365	ENSG00000117360	PRPF3	100	70.687	Homo_sapiens
ENSMZEG00005015970	prpf3	100	90.327	ENSAPOG00000015584	prpf3	100	94.565	Acanthochromis_polyacanthus
ENSMZEG00005015970	prpf3	99	70.506	ENSAMEG00000001630	PRPF3	100	70.827	Ailuropoda_melanoleuca
ENSMZEG00005015970	prpf3	100	92.045	ENSACIG00000007876	prpf3	100	92.045	Amphilophus_citrinellus
ENSMZEG00005015970	prpf3	100	90.469	ENSAOCG00000011449	prpf3	100	90.469	Amphiprion_ocellaris
ENSMZEG00005015970	prpf3	100	91.181	ENSATEG00000023583	prpf3	100	90.754	Anabas_testudineus
ENSMZEG00005015970	prpf3	99	71.429	ENSAPLG00000002440	PRPF3	100	71.067	Anas_platyrhynchos
ENSMZEG00005015970	prpf3	99	71.509	ENSACAG00000003176	PRPF3	100	71.469	Anolis_carolinensis
ENSMZEG00005015970	prpf3	99	70.365	ENSANAG00000026138	PRPF3	100	70.687	Aotus_nancymaae
ENSMZEG00005015970	prpf3	100	95.056	ENSACLG00000020127	prpf3	100	95.056	Astatotilapia_calliptera
ENSMZEG00005015970	prpf3	100	82.444	ENSAMXG00000007306	prpf3	100	81.882	Astyanax_mexicanus
ENSMZEG00005015970	prpf3	99	70.365	ENSBTAG00000013946	PRPF3	100	70.687	Bos_taurus
ENSMZEG00005015970	prpf3	86	39.209	WBGene00010844	prp-3	95	36.293	Caenorhabditis_elegans
ENSMZEG00005015970	prpf3	99	70.365	ENSCJAG00000009926	PRPF3	100	70.687	Callithrix_jacchus
ENSMZEG00005015970	prpf3	99	70.365	ENSCAFG00000011820	PRPF3	100	70.687	Canis_familiaris
ENSMZEG00005015970	prpf3	81	69.792	ENSCAFG00020019653	PRPF3	100	70.364	Canis_lupus_dingo
ENSMZEG00005015970	prpf3	99	70.365	ENSCHIG00000015434	PRPF3	100	70.687	Capra_hircus
ENSMZEG00005015970	prpf3	99	70.646	ENSTSYG00000001383	PRPF3	100	70.968	Carlito_syrichta
ENSMZEG00005015970	prpf3	92	65.449	ENSCAPG00000017812	PRPF3	95	66.335	Cavia_aperea
ENSMZEG00005015970	prpf3	99	70.506	ENSCPOG00000008068	PRPF3	100	70.827	Cavia_porcellus
ENSMZEG00005015970	prpf3	99	70.365	ENSCCAG00000026380	PRPF3	100	70.687	Cebus_capucinus
ENSMZEG00005015970	prpf3	99	58.159	ENSCATG00000041778	PRPF3	100	58.298	Cercocebus_atys
ENSMZEG00005015970	prpf3	99	70.506	ENSCLAG00000015009	PRPF3	100	70.827	Chinchilla_lanigera
ENSMZEG00005015970	prpf3	76	81.022	ENSCHOG00000011645	PRPF3	76	81.818	Choloepus_hoffmanni
ENSMZEG00005015970	prpf3	99	71.067	ENSCPBG00000008216	PRPF3	100	71.208	Chrysemys_picta_bellii
ENSMZEG00005015970	prpf3	66	60.584	ENSCING00000003312	-	99	60.584	Ciona_intestinalis
ENSMZEG00005015970	prpf3	76	57.741	ENSCSAVG00000008720	-	94	53.603	Ciona_savignyi
ENSMZEG00005015970	prpf3	99	69.803	ENSCANG00000036769	PRPF3	100	70.126	Colobus_angolensis_palliatus
ENSMZEG00005015970	prpf3	99	70.365	ENSCGRG00001019100	Prpf3	100	70.687	Cricetulus_griseus_chok1gshd
ENSMZEG00005015970	prpf3	99	70.365	ENSCGRG00000007322	Prpf3	100	70.687	Cricetulus_griseus_crigri
ENSMZEG00005015970	prpf3	100	87.539	ENSCSEG00000002532	prpf3	100	89.130	Cynoglossus_semilaevis
ENSMZEG00005015970	prpf3	100	88.478	ENSCVAG00000009318	prpf3	100	88.102	Cyprinodon_variegatus
ENSMZEG00005015970	prpf3	100	81.223	ENSDARG00000086425	prpf3	100	81.223	Danio_rerio
ENSMZEG00005015970	prpf3	99	72.741	ENSDNOG00000005904	PRPF3	100	73.250	Dasypus_novemcinctus
ENSMZEG00005015970	prpf3	93	70.287	ENSDORG00000008664	Prpf3	100	70.437	Dipodomys_ordii
ENSMZEG00005015970	prpf3	91	50.669	FBgn0036915	Prp3	99	52.844	Drosophila_melanogaster
ENSMZEG00005015970	prpf3	99	70.365	ENSETEG00000019124	PRPF3	100	70.827	Echinops_telfairi
ENSMZEG00005015970	prpf3	96	67.054	ENSEBUG00000011680	prpf3	100	61.342	Eptatretus_burgeri
ENSMZEG00005015970	prpf3	99	70.225	ENSEASG00005001566	PRPF3	100	70.547	Equus_asinus_asinus
ENSMZEG00005015970	prpf3	99	70.365	ENSECAG00000019840	PRPF3	100	70.687	Equus_caballus
ENSMZEG00005015970	prpf3	83	72.109	ENSEEUG00000007338	PRPF3	85	72.172	Erinaceus_europaeus
ENSMZEG00005015970	prpf3	100	75.637	ENSELUG00000013624	prpf3	100	76.062	Esox_lucius
ENSMZEG00005015970	prpf3	99	70.365	ENSFCAG00000013940	PRPF3	100	70.687	Felis_catus
ENSMZEG00005015970	prpf3	99	70.506	ENSFDAG00000010365	PRPF3	100	70.827	Fukomys_damarensis
ENSMZEG00005015970	prpf3	100	86.771	ENSFHEG00000021746	prpf3	100	86.486	Fundulus_heteroclitus
ENSMZEG00005015970	prpf3	100	82.930	ENSGMOG00000008535	prpf3	100	82.930	Gadus_morhua
ENSMZEG00005015970	prpf3	99	71.570	ENSGALG00000028205	PRPF3	100	71.208	Gallus_gallus
ENSMZEG00005015970	prpf3	100	86.771	ENSGAFG00000012671	prpf3	100	86.344	Gambusia_affinis
ENSMZEG00005015970	prpf3	100	86.913	ENSGACG00000011792	prpf3	100	86.771	Gasterosteus_aculeatus
ENSMZEG00005015970	prpf3	99	71.067	ENSGAGG00000013765	PRPF3	100	73.462	Gopherus_agassizii
ENSMZEG00005015970	prpf3	86	77.059	ENSGGOG00000013174	PRPF3	100	77.126	Gorilla_gorilla
ENSMZEG00005015970	prpf3	100	95.763	ENSHBUG00000003493	prpf3	100	95.763	Haplochromis_burtoni
ENSMZEG00005015970	prpf3	99	53.738	ENSHGLG00000016033	-	100	54.050	Heterocephalus_glaber_female
ENSMZEG00005015970	prpf3	99	70.506	ENSHGLG00000016569	PRPF3	100	70.827	Heterocephalus_glaber_female
ENSMZEG00005015970	prpf3	99	70.506	ENSHGLG00100007590	PRPF3	100	70.827	Heterocephalus_glaber_male
ENSMZEG00005015970	prpf3	99	54.272	ENSHGLG00100008951	-	100	54.502	Heterocephalus_glaber_male
ENSMZEG00005015970	prpf3	100	84.783	ENSHCOG00000014058	prpf3	100	81.754	Hippocampus_comes
ENSMZEG00005015970	prpf3	96	92.391	ENSIPUG00000000902	PRPF3	100	81.161	Ictalurus_punctatus
ENSMZEG00005015970	prpf3	99	70.365	ENSSTOG00000001889	PRPF3	100	70.687	Ictidomys_tridecemlineatus
ENSMZEG00005015970	prpf3	100	89.744	ENSKMAG00000001390	prpf3	100	89.744	Kryptolebias_marmoratus
ENSMZEG00005015970	prpf3	100	90.469	ENSLBEG00000026310	prpf3	100	91.040	Labrus_bergylta
ENSMZEG00005015970	prpf3	93	67.830	ENSLACG00000010541	PRPF3	100	67.169	Latimeria_chalumnae
ENSMZEG00005015970	prpf3	99	70.365	ENSLAFG00000004713	PRPF3	100	70.687	Loxodonta_africana
ENSMZEG00005015970	prpf3	99	70.365	ENSMFAG00000039791	PRPF3	100	70.687	Macaca_fascicularis
ENSMZEG00005015970	prpf3	92	69.892	ENSMMUG00000016301	PRPF3	97	71.362	Macaca_mulatta
ENSMZEG00005015970	prpf3	99	70.365	ENSMNEG00000038161	PRPF3	100	70.687	Macaca_nemestrina
ENSMZEG00005015970	prpf3	98	47.994	ENSMLEG00000041065	-	97	47.913	Mandrillus_leucophaeus
ENSMZEG00005015970	prpf3	86	77.059	ENSMLEG00000040609	PRPF3	100	77.126	Mandrillus_leucophaeus
ENSMZEG00005015970	prpf3	100	89.189	ENSMAMG00000014968	prpf3	100	89.189	Mastacembelus_armatus
ENSMZEG00005015970	prpf3	99	71.570	ENSMGAG00000000707	PRPF3	100	71.208	Meleagris_gallopavo
ENSMZEG00005015970	prpf3	99	70.225	ENSMAUG00000017112	Prpf3	100	70.687	Mesocricetus_auratus
ENSMZEG00005015970	prpf3	99	70.365	ENSMICG00000015386	PRPF3	100	73.158	Microcebus_murinus
ENSMZEG00005015970	prpf3	99	70.547	ENSMOCG00000000242	Prpf3	100	70.687	Microtus_ochrogaster
ENSMZEG00005015970	prpf3	100	82.958	ENSMMOG00000016131	prpf3	100	82.817	Mola_mola
ENSMZEG00005015970	prpf3	99	70.506	ENSMODG00000018774	PRPF3	100	70.646	Monodelphis_domestica
ENSMZEG00005015970	prpf3	100	96.739	ENSMALG00000007257	prpf3	92	96.739	Monopterus_albus
ENSMZEG00005015970	prpf3	99	70.506	MGP_CAROLIEiJ_G0025354	Prpf3	100	70.827	Mus_caroli
ENSMZEG00005015970	prpf3	99	70.506	ENSMUSG00000015748	Prpf3	100	70.827	Mus_musculus
ENSMZEG00005015970	prpf3	99	70.605	MGP_PahariEiJ_G0026798	Prpf3	100	70.927	Mus_pahari
ENSMZEG00005015970	prpf3	99	70.506	MGP_SPRETEiJ_G0026298	Prpf3	100	70.827	Mus_spretus
ENSMZEG00005015970	prpf3	99	69.307	ENSMPUG00000005080	PRPF3	100	69.873	Mustela_putorius_furo
ENSMZEG00005015970	prpf3	99	70.588	ENSMLUG00000004646	-	100	70.728	Myotis_lucifugus
ENSMZEG00005015970	prpf3	99	70.365	ENSNGAG00000000910	Prpf3	100	70.687	Nannospalax_galili
ENSMZEG00005015970	prpf3	100	98.594	ENSNBRG00000003462	prpf3	100	98.594	Neolamprologus_brichardi
ENSMZEG00005015970	prpf3	90	70.846	ENSNLEG00000009841	PRPF3	99	71.362	Nomascus_leucogenys
ENSMZEG00005015970	prpf3	83	62.832	ENSMEUG00000008733	PRPF3	89	63.609	Notamacropus_eugenii
ENSMZEG00005015970	prpf3	99	70.547	ENSOPRG00000010139	PRPF3	100	70.687	Ochotona_princeps
ENSMZEG00005015970	prpf3	99	53.427	ENSODEG00000014412	-	100	53.427	Octodon_degus
ENSMZEG00005015970	prpf3	99	70.365	ENSODEG00000011363	-	100	70.687	Octodon_degus
ENSMZEG00005015970	prpf3	100	99.147	ENSONIG00000006394	prpf3	100	99.147	Oreochromis_niloticus
ENSMZEG00005015970	prpf3	99	54.688	ENSOANG00000015441	PRPF3	100	54.688	Ornithorhynchus_anatinus
ENSMZEG00005015970	prpf3	99	70.365	ENSOCUG00000011760	PRPF3	100	70.687	Oryctolagus_cuniculus
ENSMZEG00005015970	prpf3	100	87.340	ENSORLG00000010330	prpf3	100	86.913	Oryzias_latipes
ENSMZEG00005015970	prpf3	100	87.340	ENSORLG00020009054	prpf3	100	86.913	Oryzias_latipes_hni
ENSMZEG00005015970	prpf3	100	87.198	ENSORLG00015015016	prpf3	100	86.771	Oryzias_latipes_hsok
ENSMZEG00005015970	prpf3	100	88.193	ENSOMEG00000000940	prpf3	100	88.193	Oryzias_melastigma
ENSMZEG00005015970	prpf3	99	67.227	ENSOGAG00000005352	PRPF3	100	67.367	Otolemur_garnettii
ENSMZEG00005015970	prpf3	99	70.365	ENSOARG00000020798	PRPF3	100	70.687	Ovis_aries
ENSMZEG00005015970	prpf3	98	54.367	ENSPPAG00000043769	-	99	54.167	Pan_paniscus
ENSMZEG00005015970	prpf3	99	70.225	ENSPPAG00000030983	PRPF3	100	70.547	Pan_paniscus
ENSMZEG00005015970	prpf3	99	70.365	ENSPPRG00000000731	PRPF3	100	70.687	Panthera_pardus
ENSMZEG00005015970	prpf3	99	70.365	ENSPTIG00000005516	PRPF3	100	70.687	Panthera_tigris_altaica
ENSMZEG00005015970	prpf3	99	70.365	ENSPTRG00000001254	PRPF3	100	70.687	Pan_troglodytes
ENSMZEG00005015970	prpf3	98	53.736	ENSPTRG00000047819	-	99	53.305	Pan_troglodytes
ENSMZEG00005015970	prpf3	99	70.225	ENSPANG00000000499	PRPF3	100	70.547	Papio_anubis
ENSMZEG00005015970	prpf3	100	84.751	ENSPKIG00000010501	prpf3	100	84.751	Paramormyrops_kingsleyae
ENSMZEG00005015970	prpf3	99	71.449	ENSPSIG00000014877	PRPF3	100	71.308	Pelodiscus_sinensis
ENSMZEG00005015970	prpf3	100	81.876	ENSPMGG00000007776	prpf3	100	82.194	Periophthalmus_magnuspinnatus
ENSMZEG00005015970	prpf3	99	70.365	ENSPEMG00000011672	Prpf3	100	70.687	Peromyscus_maniculatus_bairdii
ENSMZEG00005015970	prpf3	69	73.455	ENSPMAG00000005588	prpf3	99	72.788	Petromyzon_marinus
ENSMZEG00005015970	prpf3	99	70.506	ENSPCIG00000008795	PRPF3	100	70.646	Phascolarctos_cinereus
ENSMZEG00005015970	prpf3	100	86.883	ENSPFOG00000013638	prpf3	100	86.883	Poecilia_formosa
ENSMZEG00005015970	prpf3	100	87.055	ENSPLAG00000018103	prpf3	100	86.913	Poecilia_latipinna
ENSMZEG00005015970	prpf3	100	87.055	ENSPMEG00000023546	prpf3	100	86.913	Poecilia_mexicana
ENSMZEG00005015970	prpf3	100	87.055	ENSPREG00000017216	prpf3	100	86.486	Poecilia_reticulata
ENSMZEG00005015970	prpf3	76	61.266	ENSPPYG00000018646	-	99	62.384	Pongo_abelii
ENSMZEG00005015970	prpf3	93	69.277	ENSPPYG00000000900	PRPF3	99	69.624	Pongo_abelii
ENSMZEG00005015970	prpf3	85	73.551	ENSPCAG00000014908	PRPF3	87	71.498	Procavia_capensis
ENSMZEG00005015970	prpf3	99	70.225	ENSPCOG00000013828	PRPF3	100	70.547	Propithecus_coquereli
ENSMZEG00005015970	prpf3	99	70.126	ENSPVAG00000013472	PRPF3	100	70.266	Pteropus_vampyrus
ENSMZEG00005015970	prpf3	100	98.594	ENSPNYG00000004279	prpf3	100	98.594	Pundamilia_nyererei
ENSMZEG00005015970	prpf3	100	84.640	ENSPNAG00000001799	prpf3	100	84.640	Pygocentrus_nattereri
ENSMZEG00005015970	prpf3	99	70.646	ENSRNOG00000025629	Prpf3	100	70.968	Rattus_norvegicus
ENSMZEG00005015970	prpf3	83	70.213	ENSRBIG00000028854	PRPF3	98	71.831	Rhinopithecus_bieti
ENSMZEG00005015970	prpf3	99	70.365	ENSRROG00000027464	PRPF3	100	70.687	Rhinopithecus_roxellana
ENSMZEG00005015970	prpf3	99	64.045	ENSSBOG00000033104	PRPF3	100	64.376	Saimiri_boliviensis_boliviensis
ENSMZEG00005015970	prpf3	99	70.266	ENSSHAG00000009548	PRPF3	100	70.407	Sarcophilus_harrisii
ENSMZEG00005015970	prpf3	100	84.897	ENSSFOG00015022014	prpf3	100	84.897	Scleropages_formosus
ENSMZEG00005015970	prpf3	100	88.186	ENSSMAG00000015739	prpf3	100	88.186	Scophthalmus_maximus
ENSMZEG00005015970	prpf3	100	85.206	ENSSDUG00000006840	prpf3	100	85.349	Seriola_dumerili
ENSMZEG00005015970	prpf3	100	90.717	ENSSLDG00000015423	prpf3	100	90.717	Seriola_lalandi_dorsalis
ENSMZEG00005015970	prpf3	99	70.506	ENSSARG00000011064	PRPF3	100	70.646	Sorex_araneus
ENSMZEG00005015970	prpf3	99	70.711	ENSSPUG00000000809	PRPF3	100	70.401	Sphenodon_punctatus
ENSMZEG00005015970	prpf3	100	91.948	ENSSPAG00000018721	prpf3	100	91.948	Stegastes_partitus
ENSMZEG00005015970	prpf3	99	70.365	ENSSSCG00000030119	PRPF3	100	73.158	Sus_scrofa
ENSMZEG00005015970	prpf3	99	62.185	ENSTGUG00000004552	PRPF3	100	62.045	Taeniopygia_guttata
ENSMZEG00005015970	prpf3	100	81.445	ENSTRUG00000014923	prpf3	100	81.445	Takifugu_rubripes
ENSMZEG00005015970	prpf3	99	88.043	ENSTNIG00000008058	prpf3	100	82.609	Tetraodon_nigroviridis
ENSMZEG00005015970	prpf3	81	71.267	ENSTBEG00000014072	PRPF3	88	72.789	Tupaia_belangeri
ENSMZEG00005015970	prpf3	99	65.449	ENSTTRG00000010616	PRPF3	100	65.590	Tursiops_truncatus
ENSMZEG00005015970	prpf3	85	73.188	ENSUAMG00000009345	PRPF3	100	73.158	Ursus_americanus
ENSMZEG00005015970	prpf3	99	70.365	ENSUMAG00000003720	PRPF3	100	70.687	Ursus_maritimus
ENSMZEG00005015970	prpf3	89	76.471	ENSVPAG00000005425	PRPF3	89	76.644	Vicugna_pacos
ENSMZEG00005015970	prpf3	99	72.656	ENSVVUG00000007933	PRPF3	100	73.167	Vulpes_vulpes
ENSMZEG00005015970	prpf3	99	70.099	ENSXETG00000018654	prpf3	100	69.958	Xenopus_tropicalis
ENSMZEG00005015970	prpf3	100	89.268	ENSXMAG00000016347	prpf3	100	89.268	Xiphophorus_maculatus