EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005016072 (Gene tree)
Gene ID: 101484106
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 6549 bases
Position: chrLG12:16530376-16536924
Accession: 101484106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005021396	Glu-tRNAGln	PF02686.15	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005022104	-	1425	XM_004544559	ENSMZEP00005021396	192 (aa)	XP_004544616	UPI0003297494

Gene Model

Click here to download ENSMZEG00005016072's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze00970	Aminoacyl-tRNA biosynthesis	KEGG
mze01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005016072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005016072	gatc	53	64.356	ENSG00000257218	GATC	100	72.340	Homo_sapiens
ENSMZEG00005016072	gatc	56	59.813	ENSAMEG00000013298	-	79	59.813	Ailuropoda_melanoleuca
ENSMZEG00005016072	gatc	58	82.143	ENSACIG00000016853	gatc	80	82.143	Amphilophus_citrinellus
ENSMZEG00005016072	gatc	64	87.805	ENSAOCG00000014641	gatc	98	87.805	Amphiprion_ocellaris
ENSMZEG00005016072	gatc	100	72.308	ENSAPEG00000023411	gatc	100	72.308	Amphiprion_percula
ENSMZEG00005016072	gatc	53	65.347	ENSANAG00000034389	-	74	65.347	Aotus_nancymaae
ENSMZEG00005016072	gatc	100	99.479	ENSACLG00000026251	gatc	100	99.479	Astatotilapia_calliptera
ENSMZEG00005016072	gatc	68	76.336	ENSAMXG00000004252	gatc	74	63.584	Astyanax_mexicanus
ENSMZEG00005016072	gatc	53	60.396	ENSBTAG00000012791	GATC	74	60.396	Bos_taurus
ENSMZEG00005016072	gatc	66	37.795	WBGene00013433	Y66D12A.7	67	37.795	Caenorhabditis_elegans
ENSMZEG00005016072	gatc	53	65.347	ENSCJAG00000001183	-	55	65.347	Callithrix_jacchus
ENSMZEG00005016072	gatc	53	63.366	ENSCAFG00000010311	-	74	63.366	Canis_familiaris
ENSMZEG00005016072	gatc	53	63.366	ENSCAFG00020020606	-	74	63.366	Canis_lupus_dingo
ENSMZEG00005016072	gatc	52	61.616	ENSCHIG00000019423	-	73	61.616	Capra_hircus
ENSMZEG00005016072	gatc	53	64.356	ENSTSYG00000006845	-	74	64.356	Carlito_syrichta
ENSMZEG00005016072	gatc	51	58.333	ENSCPOG00000026436	-	73	58.333	Cavia_porcellus
ENSMZEG00005016072	gatc	53	65.347	ENSCCAG00000022235	-	74	65.347	Cebus_capucinus
ENSMZEG00005016072	gatc	53	64.356	ENSCATG00000038807	GATC	74	64.356	Cercocebus_atys
ENSMZEG00005016072	gatc	51	63.918	ENSCLAG00000011015	-	61	63.918	Chinchilla_lanigera
ENSMZEG00005016072	gatc	53	64.356	ENSCSAG00000002259	GATC	74	64.356	Chlorocebus_sabaeus
ENSMZEG00005016072	gatc	53	63.366	ENSCHOG00000009235	-	74	63.366	Choloepus_hoffmanni
ENSMZEG00005016072	gatc	64	63.415	ENSCPBG00000011342	-	65	63.415	Chrysemys_picta_bellii
ENSMZEG00005016072	gatc	53	64.356	ENSCANG00000031071	GATC	74	64.356	Colobus_angolensis_palliatus
ENSMZEG00005016072	gatc	100	55.729	ENSCSEG00000016618	-	100	55.729	Cynoglossus_semilaevis
ENSMZEG00005016072	gatc	99	62.632	ENSCSEG00000007798	gatc	93	62.632	Cynoglossus_semilaevis
ENSMZEG00005016072	gatc	99	66.316	ENSCVAG00000004364	gatc	100	66.316	Cyprinodon_variegatus
ENSMZEG00005016072	gatc	81	65.605	ENSDARG00000056855	gatc	83	65.605	Danio_rerio
ENSMZEG00005016072	gatc	55	57.265	ENSDNOG00000012593	-	65	56.481	Dasypus_novemcinctus
ENSMZEG00005016072	gatc	61	40.678	FBgn0064115	GatC	73	40.678	Drosophila_melanogaster
ENSMZEG00005016072	gatc	54	55.238	ENSETEG00000002604	-	77	55.238	Echinops_telfairi
ENSMZEG00005016072	gatc	51	46.939	ENSEBUG00000008772	gatc	51	50.562	Eptatretus_burgeri
ENSMZEG00005016072	gatc	53	65.347	ENSECAG00000011118	-	74	65.347	Equus_caballus
ENSMZEG00005016072	gatc	52	59.000	ENSEEUG00000011638	-	74	59.000	Erinaceus_europaeus
ENSMZEG00005016072	gatc	66	73.846	ENSELUG00000012608	gatc	75	80.583	Esox_lucius
ENSMZEG00005016072	gatc	55	60.952	ENSFCAG00000038718	-	77	60.952	Felis_catus
ENSMZEG00005016072	gatc	59	59.649	ENSFALG00000007564	-	75	59.649	Ficedula_albicollis
ENSMZEG00005016072	gatc	55	63.810	ENSFDAG00000018720	-	77	63.810	Fukomys_damarensis
ENSMZEG00005016072	gatc	98	67.553	ENSFHEG00000014992	GATC	99	67.553	Fundulus_heteroclitus
ENSMZEG00005016072	gatc	76	67.808	ENSGMOG00000008742	gatc	90	67.808	Gadus_morhua
ENSMZEG00005016072	gatc	55	59.434	ENSGALG00000007195	-	80	58.036	Gallus_gallus
ENSMZEG00005016072	gatc	68	76.154	ENSGAFG00000012801	gatc	82	76.154	Gambusia_affinis
ENSMZEG00005016072	gatc	100	68.557	ENSGACG00000008973	gatc	100	68.557	Gasterosteus_aculeatus
ENSMZEG00005016072	gatc	67	62.016	ENSGAGG00000016018	-	70	62.016	Gopherus_agassizii
ENSMZEG00005016072	gatc	100	97.917	ENSHBUG00000006827	gatc	100	97.917	Haplochromis_burtoni
ENSMZEG00005016072	gatc	56	62.617	ENSHGLG00000011394	GATC	79	62.617	Heterocephalus_glaber_female
ENSMZEG00005016072	gatc	56	60.748	ENSHGLG00100018850	-	78	60.748	Heterocephalus_glaber_male
ENSMZEG00005016072	gatc	67	79.688	ENSHCOG00000009209	gatc	100	79.688	Hippocampus_comes
ENSMZEG00005016072	gatc	90	61.850	ENSIPUG00000023072	gatc	76	63.006	Ictalurus_punctatus
ENSMZEG00005016072	gatc	51	65.657	ENSSTOG00000025740	-	65	65.657	Ictidomys_tridecemlineatus
ENSMZEG00005016072	gatc	51	64.948	ENSJJAG00000000369	Gatc	61	64.948	Jaculus_jaculus
ENSMZEG00005016072	gatc	67	78.295	ENSKMAG00000016476	gatc	99	78.295	Kryptolebias_marmoratus
ENSMZEG00005016072	gatc	100	66.146	ENSLBEG00000007603	gatc	100	66.146	Labrus_bergylta
ENSMZEG00005016072	gatc	81	49.677	ENSLACG00000018239	-	75	49.677	Latimeria_chalumnae
ENSMZEG00005016072	gatc	76	66.892	ENSLOCG00000004056	gatc	80	66.892	Lepisosteus_oculatus
ENSMZEG00005016072	gatc	53	57.522	ENSLAFG00000006384	-	74	57.522	Loxodonta_africana
ENSMZEG00005016072	gatc	53	64.356	ENSMFAG00000034197	GATC	74	64.356	Macaca_fascicularis
ENSMZEG00005016072	gatc	53	64.356	ENSMMUG00000046665	GATC	74	64.356	Macaca_mulatta
ENSMZEG00005016072	gatc	53	64.356	ENSMNEG00000034653	GATC	74	64.356	Macaca_nemestrina
ENSMZEG00005016072	gatc	53	65.347	ENSMLEG00000039862	GATC	74	65.347	Mandrillus_leucophaeus
ENSMZEG00005016072	gatc	100	69.271	ENSMAMG00000015851	gatc	100	69.271	Mastacembelus_armatus
ENSMZEG00005016072	gatc	55	61.321	ENSMGAG00000008733	-	100	61.321	Meleagris_gallopavo
ENSMZEG00005016072	gatc	60	56.034	ENSMAUG00000012756	Gatc	75	56.034	Mesocricetus_auratus
ENSMZEG00005016072	gatc	53	65.347	ENSMICG00000008669	-	74	65.347	Microcebus_murinus
ENSMZEG00005016072	gatc	50	64.583	ENSMOCG00000005051	Gatc	62	64.583	Microtus_ochrogaster
ENSMZEG00005016072	gatc	58	80.180	ENSMMOG00000017695	gatc	92	80.000	Mola_mola
ENSMZEG00005016072	gatc	52	63.636	ENSMODG00000003152	-	75	63.636	Monodelphis_domestica
ENSMZEG00005016072	gatc	50	65.625	MGP_PahariEiJ_G0024203	Gatc	62	65.625	Mus_pahari
ENSMZEG00005016072	gatc	56	60.748	ENSMPUG00000003183	-	79	60.748	Mustela_putorius_furo
ENSMZEG00005016072	gatc	100	97.917	ENSNBRG00000007810	gatc	100	97.917	Neolamprologus_brichardi
ENSMZEG00005016072	gatc	55	62.857	ENSNLEG00000015651	GATC	77	62.857	Nomascus_leucogenys
ENSMZEG00005016072	gatc	54	61.538	ENSMEUG00000004064	-	83	62.136	Notamacropus_eugenii
ENSMZEG00005016072	gatc	52	66.667	ENSOPRG00000004226	-	73	66.667	Ochotona_princeps
ENSMZEG00005016072	gatc	67	95.420	ENSONIG00000013444	gatc	90	95.420	Oreochromis_niloticus
ENSMZEG00005016072	gatc	56	62.617	ENSOCUG00000009867	-	79	62.617	Oryctolagus_cuniculus
ENSMZEG00005016072	gatc	63	80.992	ENSORLG00000007156	gatc	100	80.992	Oryzias_latipes
ENSMZEG00005016072	gatc	100	65.104	ENSORLG00020014991	gatc	100	65.104	Oryzias_latipes_hni
ENSMZEG00005016072	gatc	100	64.583	ENSORLG00015003450	gatc	100	64.583	Oryzias_latipes_hsok
ENSMZEG00005016072	gatc	100	65.152	ENSOMEG00000002280	gatc	100	65.152	Oryzias_melastigma
ENSMZEG00005016072	gatc	55	62.857	ENSOGAG00000003850	-	96	62.857	Otolemur_garnettii
ENSMZEG00005016072	gatc	60	55.372	ENSOARG00000012338	-	94	55.372	Ovis_aries
ENSMZEG00005016072	gatc	53	63.366	ENSPPAG00000029164	GATC	74	63.366	Pan_paniscus
ENSMZEG00005016072	gatc	56	59.813	ENSPPRG00000000929	-	79	59.813	Panthera_pardus
ENSMZEG00005016072	gatc	56	59.813	ENSPTIG00000009889	-	79	59.813	Panthera_tigris_altaica
ENSMZEG00005016072	gatc	53	63.366	ENSPTRG00000049887	GATC	75	63.366	Pan_troglodytes
ENSMZEG00005016072	gatc	53	63.366	ENSPANG00000033975	GATC	74	63.366	Papio_anubis
ENSMZEG00005016072	gatc	77	60.544	ENSPKIG00000024856	gatc	76	60.544	Paramormyrops_kingsleyae
ENSMZEG00005016072	gatc	60	64.655	ENSPSIG00000011112	-	99	64.655	Pelodiscus_sinensis
ENSMZEG00005016072	gatc	67	82.812	ENSPMGG00000018829	gatc	82	82.812	Periophthalmus_magnuspinnatus
ENSMZEG00005016072	gatc	97	70.053	ENSPFOG00000011603	gatc	98	70.053	Poecilia_formosa
ENSMZEG00005016072	gatc	97	69.519	ENSPLAG00000002471	gatc	98	69.519	Poecilia_latipinna
ENSMZEG00005016072	gatc	97	69.519	ENSPMEG00000020958	gatc	98	69.519	Poecilia_mexicana
ENSMZEG00005016072	gatc	58	83.784	ENSPREG00000022256	gatc	75	83.784	Poecilia_reticulata
ENSMZEG00005016072	gatc	56	61.682	ENSPPYG00000005030	GATC	79	61.682	Pongo_abelii
ENSMZEG00005016072	gatc	61	55.085	ENSPCAG00000013864	-	87	55.085	Procavia_capensis
ENSMZEG00005016072	gatc	51	64.948	ENSPVAG00000002228	-	72	64.948	Pteropus_vampyrus
ENSMZEG00005016072	gatc	100	97.917	ENSPNYG00000016015	gatc	100	97.917	Pundamilia_nyererei
ENSMZEG00005016072	gatc	69	74.242	ENSPNAG00000001239	gatc	75	62.428	Pygocentrus_nattereri
ENSMZEG00005016072	gatc	53	63.366	ENSRBIG00000033363	GATC	74	63.366	Rhinopithecus_bieti
ENSMZEG00005016072	gatc	53	63.366	ENSRROG00000042802	GATC	74	63.366	Rhinopithecus_roxellana
ENSMZEG00005016072	gatc	53	63.366	ENSSBOG00000033750	-	74	63.366	Saimiri_boliviensis_boliviensis
ENSMZEG00005016072	gatc	55	62.264	ENSSHAG00000005745	-	100	62.264	Sarcophilus_harrisii
ENSMZEG00005016072	gatc	88	58.721	ENSSFOG00015002508	gatc	91	59.864	Scleropages_formosus
ENSMZEG00005016072	gatc	100	71.875	ENSSMAG00000014280	gatc	100	71.875	Scophthalmus_maximus
ENSMZEG00005016072	gatc	100	71.795	ENSSDUG00000012206	gatc	100	71.795	Seriola_dumerili
ENSMZEG00005016072	gatc	100	72.308	ENSSLDG00000025159	gatc	98	72.308	Seriola_lalandi_dorsalis
ENSMZEG00005016072	gatc	63	54.545	ENSSPUG00000015693	-	70	63.918	Sphenodon_punctatus
ENSMZEG00005016072	gatc	100	72.396	ENSSPAG00000011860	gatc	100	72.396	Stegastes_partitus
ENSMZEG00005016072	gatc	55	64.151	ENSTGUG00000009561	-	98	64.151	Taeniopygia_guttata
ENSMZEG00005016072	gatc	100	63.590	ENSTRUG00000021596	gatc	96	63.590	Takifugu_rubripes
ENSMZEG00005016072	gatc	100	62.755	ENSTNIG00000015879	gatc	95	62.755	Tetraodon_nigroviridis
ENSMZEG00005016072	gatc	52	65.657	ENSTTRG00000000144	GATC	73	65.657	Tursiops_truncatus
ENSMZEG00005016072	gatc	56	60.748	ENSUAMG00000015523	-	79	60.748	Ursus_americanus
ENSMZEG00005016072	gatc	53	63.366	ENSVVUG00000021055	-	74	63.366	Vulpes_vulpes
ENSMZEG00005016072	gatc	58	82.883	ENSXCOG00000017087	gatc	81	82.883	Xiphophorus_couchianus
ENSMZEG00005016072	gatc	99	66.842	ENSXMAG00000018267	gatc	100	66.842	Xiphophorus_maculatus