EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005016132 (Gene tree)
Gene ID: 101465253
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 10180 bases
Position: chrLG5:22234980-22245159
Accession: 101465253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005021480	Exo_endo_phos	PF03372.23	5e-16	1	1
ENSMZEP00005021488	Exo_endo_phos	PF03372.23	6.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005022189	-	2746	XM_004548778	ENSMZEP00005021480	592 (aa)	XP_004548835	UPI0003297027
ENSMZET00005022198	-	1704	-	ENSMZEP00005021488	567 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005016132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005016132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005016132	pde12	96	58.377	ENSG00000174840	PDE12	96	57.360	Homo_sapiens
ENSMZEG00005016132	pde12	99	80.134	ENSAPOG00000018806	pde12	99	80.134	Acanthochromis_polyacanthus
ENSMZEG00005016132	pde12	96	58.609	ENSAMEG00000011802	PDE12	99	58.957	Ailuropoda_melanoleuca
ENSMZEG00005016132	pde12	100	90.572	ENSACIG00000014918	pde12	100	90.572	Amphilophus_citrinellus
ENSMZEG00005016132	pde12	99	82.234	ENSAOCG00000016376	pde12	99	82.234	Amphiprion_ocellaris
ENSMZEG00005016132	pde12	99	82.064	ENSAPEG00000000756	pde12	99	82.064	Amphiprion_percula
ENSMZEG00005016132	pde12	100	78.885	ENSATEG00000003072	pde12	99	80.175	Anabas_testudineus
ENSMZEG00005016132	pde12	96	52.807	ENSACAG00000003067	PDE12	94	53.684	Anolis_carolinensis
ENSMZEG00005016132	pde12	96	58.131	ENSANAG00000011815	PDE12	94	58.579	Aotus_nancymaae
ENSMZEG00005016132	pde12	100	99.493	ENSACLG00000010127	pde12	100	99.493	Astatotilapia_calliptera
ENSMZEG00005016132	pde12	98	64.587	ENSAMXG00000020765	pde12	99	64.587	Astyanax_mexicanus
ENSMZEG00005016132	pde12	96	59.208	ENSBTAG00000015563	PDE12	96	58.376	Bos_taurus
ENSMZEG00005016132	pde12	54	30.655	WBGene00011268	pde-12	52	30.655	Caenorhabditis_elegans
ENSMZEG00005016132	pde12	96	58.031	ENSCJAG00000019905	PDE12	94	58.895	Callithrix_jacchus
ENSMZEG00005016132	pde12	96	57.560	ENSCAFG00000007792	PDE12	98	56.402	Canis_familiaris
ENSMZEG00005016132	pde12	96	57.560	ENSCAFG00020006692	PDE12	98	56.494	Canis_lupus_dingo
ENSMZEG00005016132	pde12	96	59.552	ENSCHIG00000014202	PDE12	96	58.347	Capra_hircus
ENSMZEG00005016132	pde12	96	57.686	ENSTSYG00000025750	PDE12	99	56.066	Carlito_syrichta
ENSMZEG00005016132	pde12	96	58.722	ENSCPOG00000001620	PDE12	95	59.067	Cavia_porcellus
ENSMZEG00005016132	pde12	96	52.448	ENSCCAG00000031290	PDE12	94	62.281	Cebus_capucinus
ENSMZEG00005016132	pde12	96	58.377	ENSCATG00000044539	PDE12	94	58.377	Cercocebus_atys
ENSMZEG00005016132	pde12	96	57.093	ENSCLAG00000004864	PDE12	94	57.785	Chinchilla_lanigera
ENSMZEG00005016132	pde12	96	58.478	ENSCSAG00000012275	PDE12	94	58.478	Chlorocebus_sabaeus
ENSMZEG00005016132	pde12	66	63.918	ENSCHOG00000012173	-	99	61.205	Choloepus_hoffmanni
ENSMZEG00005016132	pde12	85	64.305	ENSCHOG00000002188	-	83	64.130	Choloepus_hoffmanni
ENSMZEG00005016132	pde12	96	57.793	ENSCPBG00000012353	PDE12	91	58.319	Chrysemys_picta_bellii
ENSMZEG00005016132	pde12	95	35.714	ENSCING00000006903	-	99	37.238	Ciona_intestinalis
ENSMZEG00005016132	pde12	96	58.722	ENSCANG00000038723	PDE12	94	58.722	Colobus_angolensis_palliatus
ENSMZEG00005016132	pde12	96	58.048	ENSCGRG00001021836	Pde12	94	58.632	Cricetulus_griseus_chok1gshd
ENSMZEG00005016132	pde12	96	58.076	ENSCGRG00000012319	Pde12	94	58.319	Cricetulus_griseus_crigri
ENSMZEG00005016132	pde12	96	74.240	ENSCSEG00000018538	pde12	100	75.850	Cynoglossus_semilaevis
ENSMZEG00005016132	pde12	82	84.314	ENSCVAG00000003624	pde12	93	84.314	Cyprinodon_variegatus
ENSMZEG00005016132	pde12	96	60.286	ENSDARG00000030964	pde12	93	62.075	Danio_rerio
ENSMZEG00005016132	pde12	96	57.949	ENSDNOG00000048413	PDE12	94	58.390	Dasypus_novemcinctus
ENSMZEG00005016132	pde12	96	57.513	ENSDORG00000004313	Pde12	98	57.262	Dipodomys_ordii
ENSMZEG00005016132	pde12	91	36.380	FBgn0051759	CG31759	93	36.380	Drosophila_melanogaster
ENSMZEG00005016132	pde12	74	44.578	ENSEBUG00000004803	pde12	79	44.578	Eptatretus_burgeri
ENSMZEG00005016132	pde12	96	58.549	ENSEASG00005000644	PDE12	94	59.067	Equus_asinus_asinus
ENSMZEG00005016132	pde12	96	58.722	ENSECAG00000005326	PDE12	94	59.240	Equus_caballus
ENSMZEG00005016132	pde12	52	63.975	ENSEEUG00000010406	-	52	63.975	Erinaceus_europaeus
ENSMZEG00005016132	pde12	99	64.587	ENSELUG00000014391	pde12	98	64.755	Esox_lucius
ENSMZEG00005016132	pde12	96	57.886	ENSFCAG00000031696	PDE12	94	58.232	Felis_catus
ENSMZEG00005016132	pde12	82	59.544	ENSFALG00000008401	PDE12	99	60.788	Ficedula_albicollis
ENSMZEG00005016132	pde12	97	57.877	ENSFDAG00000021278	PDE12	95	58.562	Fukomys_damarensis
ENSMZEG00005016132	pde12	94	75.451	ENSFHEG00000018967	pde12	91	74.955	Fundulus_heteroclitus
ENSMZEG00005016132	pde12	97	61.593	ENSGMOG00000018041	pde12	99	62.832	Gadus_morhua
ENSMZEG00005016132	pde12	96	59.180	ENSGALG00000052355	PDE12	95	59.180	Gallus_gallus
ENSMZEG00005016132	pde12	99	76.650	ENSGAFG00000002045	pde12	99	76.650	Gambusia_affinis
ENSMZEG00005016132	pde12	100	75.253	ENSGACG00000003914	pde12	100	76.094	Gasterosteus_aculeatus
ENSMZEG00005016132	pde12	96	57.719	ENSGAGG00000010266	PDE12	91	58.772	Gopherus_agassizii
ENSMZEG00005016132	pde12	96	58.549	ENSGGOG00000003312	PDE12	94	58.549	Gorilla_gorilla
ENSMZEG00005016132	pde12	100	99.831	ENSHBUG00000023370	pde12	100	99.831	Haplochromis_burtoni
ENSMZEG00005016132	pde12	96	57.340	ENSHGLG00000005661	PDE12	94	57.931	Heterocephalus_glaber_female
ENSMZEG00005016132	pde12	96	57.439	ENSHGLG00100001136	PDE12	94	58.031	Heterocephalus_glaber_male
ENSMZEG00005016132	pde12	100	69.154	ENSHCOG00000013749	pde12	100	69.154	Hippocampus_comes
ENSMZEG00005016132	pde12	97	63.958	ENSIPUG00000007123	Pde12	95	65.018	Ictalurus_punctatus
ENSMZEG00005016132	pde12	98	56.388	ENSSTOG00000007861	PDE12	96	57.167	Ictidomys_tridecemlineatus
ENSMZEG00005016132	pde12	99	56.020	ENSJJAG00000006038	Pde12	94	57.804	Jaculus_jaculus
ENSMZEG00005016132	pde12	99	80.034	ENSKMAG00000018523	pde12	99	80.034	Kryptolebias_marmoratus
ENSMZEG00005016132	pde12	96	78.856	ENSLBEG00000009762	PDE12	100	78.297	Labrus_bergylta
ENSMZEG00005016132	pde12	99	72.069	ENSLBEG00000026775	pde12	100	73.211	Labrus_bergylta
ENSMZEG00005016132	pde12	97	62.500	ENSLACG00000015492	PDE12	94	62.857	Latimeria_chalumnae
ENSMZEG00005016132	pde12	97	61.634	ENSLOCG00000013277	pde12	94	63.055	Lepisosteus_oculatus
ENSMZEG00005016132	pde12	94	58.907	ENSLAFG00000002821	PDE12	99	58.938	Loxodonta_africana
ENSMZEG00005016132	pde12	96	58.549	ENSMFAG00000030966	PDE12	94	58.549	Macaca_fascicularis
ENSMZEG00005016132	pde12	96	58.549	ENSMMUG00000004052	PDE12	94	58.549	Macaca_mulatta
ENSMZEG00005016132	pde12	96	58.549	ENSMNEG00000030068	PDE12	94	58.549	Macaca_nemestrina
ENSMZEG00005016132	pde12	96	58.549	ENSMLEG00000036137	PDE12	94	58.549	Mandrillus_leucophaeus
ENSMZEG00005016132	pde12	100	82.601	ENSMAMG00000014415	pde12	100	82.601	Mastacembelus_armatus
ENSMZEG00005016132	pde12	96	94.737	ENSMZEG00005028202	-	99	95.044	Maylandia_zebra
ENSMZEG00005016132	pde12	54	65.312	ENSMGAG00000006449	PDE12	99	65.312	Meleagris_gallopavo
ENSMZEG00005016132	pde12	96	56.766	ENSMAUG00000000442	Pde12	99	55.462	Mesocricetus_auratus
ENSMZEG00005016132	pde12	96	58.031	ENSMICG00000005723	PDE12	94	58.031	Microcebus_murinus
ENSMZEG00005016132	pde12	97	57.565	ENSMOCG00000020734	Pde12	97	57.436	Microtus_ochrogaster
ENSMZEG00005016132	pde12	100	77.196	ENSMMOG00000013636	pde12	100	77.196	Mola_mola
ENSMZEG00005016132	pde12	96	56.370	ENSMODG00000000155	PDE12	95	56.545	Monodelphis_domestica
ENSMZEG00005016132	pde12	100	77.027	ENSMALG00000022647	pde12	100	77.027	Monopterus_albus
ENSMZEG00005016132	pde12	96	58.362	MGP_CAROLIEiJ_G0019032	Pde12	97	57.699	Mus_caroli
ENSMZEG00005016132	pde12	96	58.632	ENSMUSG00000043702	Pde12	97	58.136	Mus_musculus
ENSMZEG00005016132	pde12	96	58.532	MGP_PahariEiJ_G0030049	Pde12	95	58.895	Mus_pahari
ENSMZEG00005016132	pde12	96	58.532	MGP_SPRETEiJ_G0019916	Pde12	97	58.037	Mus_spretus
ENSMZEG00005016132	pde12	96	57.612	ENSMPUG00000016869	PDE12	94	58.131	Mustela_putorius_furo
ENSMZEG00005016132	pde12	96	58.793	ENSMLUG00000026487	PDE12	95	59.310	Myotis_lucifugus
ENSMZEG00005016132	pde12	96	58.639	ENSNGAG00000001228	Pde12	97	57.607	Nannospalax_galili
ENSMZEG00005016132	pde12	99	87.797	ENSNBRG00000015769	pde12	69	87.797	Neolamprologus_brichardi
ENSMZEG00005016132	pde12	96	58.377	ENSNLEG00000007269	-	94	58.377	Nomascus_leucogenys
ENSMZEG00005016132	pde12	96	54.957	ENSNLEG00000034833	-	95	54.174	Nomascus_leucogenys
ENSMZEG00005016132	pde12	96	55.098	ENSMEUG00000006786	PDE12	94	56.128	Notamacropus_eugenii
ENSMZEG00005016132	pde12	96	57.831	ENSOPRG00000015273	PDE12	94	59.450	Ochotona_princeps
ENSMZEG00005016132	pde12	96	58.333	ENSODEG00000006268	PDE12	96	57.868	Octodon_degus
ENSMZEG00005016132	pde12	94	98.925	ENSONIG00000004293	pde12	100	98.925	Oreochromis_niloticus
ENSMZEG00005016132	pde12	90	55.147	ENSOANG00000012885	PDE12	99	56.341	Ornithorhynchus_anatinus
ENSMZEG00005016132	pde12	96	58.752	ENSOCUG00000000823	PDE12	94	59.483	Oryctolagus_cuniculus
ENSMZEG00005016132	pde12	100	73.356	ENSORLG00000017444	pde12	100	74.030	Oryzias_latipes
ENSMZEG00005016132	pde12	100	72.681	ENSORLG00020010469	pde12	100	73.356	Oryzias_latipes_hni
ENSMZEG00005016132	pde12	100	73.187	ENSORLG00015004093	pde12	100	74.030	Oryzias_latipes_hsok
ENSMZEG00005016132	pde12	100	72.804	ENSOMEG00000020900	pde12	100	72.804	Oryzias_melastigma
ENSMZEG00005016132	pde12	96	58.204	ENSOGAG00000024093	PDE12	94	58.204	Otolemur_garnettii
ENSMZEG00005016132	pde12	92	59.140	ENSOARG00000013642	PDE12	99	59.532	Ovis_aries
ENSMZEG00005016132	pde12	96	58.204	ENSPPAG00000034712	PDE12	94	58.204	Pan_paniscus
ENSMZEG00005016132	pde12	96	57.886	ENSPPRG00000011738	PDE12	94	58.232	Panthera_pardus
ENSMZEG00005016132	pde12	85	58.300	ENSPTIG00000019166	PDE12	95	58.300	Panthera_tigris_altaica
ENSMZEG00005016132	pde12	96	58.377	ENSPTRG00000030221	PDE12	94	58.377	Pan_troglodytes
ENSMZEG00005016132	pde12	96	58.377	ENSPANG00000007324	PDE12	94	58.377	Papio_anubis
ENSMZEG00005016132	pde12	97	61.812	ENSPKIG00000025354	pde12	95	62.700	Paramormyrops_kingsleyae
ENSMZEG00005016132	pde12	96	58.070	ENSPSIG00000004926	PDE12	91	58.947	Pelodiscus_sinensis
ENSMZEG00005016132	pde12	100	65.505	ENSPMGG00000006742	pde12	99	66.725	Periophthalmus_magnuspinnatus
ENSMZEG00005016132	pde12	81	60.000	ENSPEMG00000007259	Pde12	92	60.526	Peromyscus_maniculatus_bairdii
ENSMZEG00005016132	pde12	99	79.229	ENSPFOG00000011864	pde12	99	79.229	Poecilia_formosa
ENSMZEG00005016132	pde12	73	80.556	ENSPLAG00000023871	pde12	80	80.556	Poecilia_latipinna
ENSMZEG00005016132	pde12	99	79.188	ENSPMEG00000005674	pde12	99	79.188	Poecilia_mexicana
ENSMZEG00005016132	pde12	99	78.511	ENSPREG00000022831	pde12	99	78.511	Poecilia_reticulata
ENSMZEG00005016132	pde12	96	58.478	ENSPPYG00000013769	PDE12	94	58.651	Pongo_abelii
ENSMZEG00005016132	pde12	96	57.686	ENSPCOG00000026004	PDE12	94	58.204	Propithecus_coquereli
ENSMZEG00005016132	pde12	96	58.087	ENSPVAG00000008885	PDE12	94	58.609	Pteropus_vampyrus
ENSMZEG00005016132	pde12	100	99.662	ENSPNYG00000013258	pde12	100	99.662	Pundamilia_nyererei
ENSMZEG00005016132	pde12	98	68.096	ENSPNAG00000029032	pde12	98	68.096	Pygocentrus_nattereri
ENSMZEG00005016132	pde12	96	58.020	ENSRNOG00000059442	Pde12	95	58.692	Rattus_norvegicus
ENSMZEG00005016132	pde12	96	58.549	ENSRBIG00000040704	PDE12	94	58.549	Rhinopithecus_bieti
ENSMZEG00005016132	pde12	96	58.549	ENSRROG00000031279	PDE12	94	58.549	Rhinopithecus_roxellana
ENSMZEG00005016132	pde12	96	57.732	ENSSBOG00000023974	PDE12	94	58.752	Saimiri_boliviensis_boliviensis
ENSMZEG00005016132	pde12	80	66.369	ENSSFOG00015003468	pde12	87	66.369	Scleropages_formosus
ENSMZEG00005016132	pde12	96	76.554	ENSSMAG00000003258	pde12	98	74.786	Scophthalmus_maximus
ENSMZEG00005016132	pde12	100	82.095	ENSSDUG00000020470	pde12	100	82.095	Seriola_dumerili
ENSMZEG00005016132	pde12	100	79.561	ENSSLDG00000019833	pde12	100	79.561	Seriola_lalandi_dorsalis
ENSMZEG00005016132	pde12	96	59.408	ENSSARG00000007201	PDE12	95	59.408	Sorex_araneus
ENSMZEG00005016132	pde12	99	78.849	ENSSPAG00000014980	pde12	99	78.849	Stegastes_partitus
ENSMZEG00005016132	pde12	54	55.625	ENSSSCG00000034476	-	74	55.625	Sus_scrofa
ENSMZEG00005016132	pde12	96	58.549	ENSSSCG00000011465	-	94	59.413	Sus_scrofa
ENSMZEG00005016132	pde12	63	62.803	ENSTGUG00000007290	PDE12	100	62.803	Taeniopygia_guttata
ENSMZEG00005016132	pde12	100	73.524	ENSTRUG00000005159	pde12	99	73.524	Takifugu_rubripes
ENSMZEG00005016132	pde12	99	73.051	ENSTNIG00000017497	pde12	99	73.051	Tetraodon_nigroviridis
ENSMZEG00005016132	pde12	75	63.399	ENSTBEG00000008202	PDE12	74	63.399	Tupaia_belangeri
ENSMZEG00005016132	pde12	96	58.031	ENSTTRG00000014707	PDE12	94	59.067	Tursiops_truncatus
ENSMZEG00005016132	pde12	96	57.858	ENSUAMG00000020634	-	94	58.377	Ursus_americanus
ENSMZEG00005016132	pde12	71	50.478	ENSUAMG00000008368	-	90	50.718	Ursus_americanus
ENSMZEG00005016132	pde12	74	59.681	ENSUMAG00000021906	PDE12	100	60.364	Ursus_maritimus
ENSMZEG00005016132	pde12	96	57.759	ENSVVUG00000020335	PDE12	92	58.520	Vulpes_vulpes
ENSMZEG00005016132	pde12	96	50.179	ENSXETG00000008653	pde12	97	50.179	Xenopus_tropicalis
ENSMZEG00005016132	pde12	98	76.502	ENSXCOG00000000407	pde12	98	78.761	Xiphophorus_couchianus
ENSMZEG00005016132	pde12	99	77.834	ENSXMAG00000013370	pde12	100	77.834	Xiphophorus_maculatus