EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005016135 (Gene tree)
Gene ID: 101484449
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 9012 bases
Position: chrLG10:11194666-11203677
Accession: 101484449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005021479	ARS2	PF04959.13	2.4e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005022188	-	4229	XM_012922676	ENSMZEP00005021479	911 (aa)	XP_012778130	-

Gene Model

Click here to download ENSMZEG00005016135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005016135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005016135	srrt	50	75.328	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSMZEG00005016135	srrt	92	91.320	ENSAPOG00000002304	srrt	95	90.963	Acanthochromis_polyacanthus
ENSMZEG00005016135	srrt	92	64.781	ENSAMEG00000014506	SRRT	51	75.604	Ailuropoda_melanoleuca
ENSMZEG00005016135	srrt	82	97.479	ENSACIG00000015795	srrt	90	97.363	Amphilophus_citrinellus
ENSMZEG00005016135	srrt	89	56.302	ENSAOCG00000009189	-	52	66.957	Amphiprion_ocellaris
ENSMZEG00005016135	srrt	92	91.538	ENSAOCG00000009693	srrt	95	91.180	Amphiprion_ocellaris
ENSMZEG00005016135	srrt	92	91.180	ENSAPEG00000003646	srrt	95	92.133	Amphiprion_percula
ENSMZEG00005016135	srrt	89	56.302	ENSAPEG00000020016	-	52	66.957	Amphiprion_percula
ENSMZEG00005016135	srrt	52	62.322	ENSATEG00000003652	-	85	65.665	Anabas_testudineus
ENSMZEG00005016135	srrt	92	87.232	ENSATEG00000014425	srrt	88	91.868	Anabas_testudineus
ENSMZEG00005016135	srrt	92	67.099	ENSACAG00000001014	SRRT	52	76.586	Anolis_carolinensis
ENSMZEG00005016135	srrt	50	74.409	ENSANAG00000031718	SRRT	53	74.409	Aotus_nancymaae
ENSMZEG00005016135	srrt	100	99.780	ENSACLG00000013156	srrt	100	99.780	Astatotilapia_calliptera
ENSMZEG00005016135	srrt	50	65.451	ENSACLG00000009423	-	52	65.435	Astatotilapia_calliptera
ENSMZEG00005016135	srrt	50	74.194	ENSBTAG00000001134	SRRT	53	74.194	Bos_taurus
ENSMZEG00005016135	srrt	59	45.833	WBGene00017085	E01A2.2	85	41.513	Caenorhabditis_elegans
ENSMZEG00005016135	srrt	50	74.194	ENSCJAG00000014917	SRRT	53	74.194	Callithrix_jacchus
ENSMZEG00005016135	srrt	92	65.157	ENSCAFG00000023538	SRRT	53	74.409	Canis_familiaris
ENSMZEG00005016135	srrt	92	65.268	ENSCAFG00020013358	SRRT	52	76.159	Canis_lupus_dingo
ENSMZEG00005016135	srrt	84	74.675	ENSCHIG00000010495	SRRT	85	74.675	Capra_hircus
ENSMZEG00005016135	srrt	50	74.892	ENSTSYG00000036426	SRRT	56	74.892	Carlito_syrichta
ENSMZEG00005016135	srrt	50	75.165	ENSCAPG00000013586	SRRT	89	70.253	Cavia_aperea
ENSMZEG00005016135	srrt	50	73.820	ENSCPOG00000001739	SRRT	53	73.774	Cavia_porcellus
ENSMZEG00005016135	srrt	50	74.409	ENSCCAG00000015877	SRRT	53	74.409	Cebus_capucinus
ENSMZEG00005016135	srrt	50	74.675	ENSCATG00000036306	SRRT	53	74.675	Cercocebus_atys
ENSMZEG00005016135	srrt	92	63.551	ENSCLAG00000007568	SRRT	89	70.664	Chinchilla_lanigera
ENSMZEG00005016135	srrt	50	74.409	ENSCSAG00000017996	SRRT	53	74.409	Chlorocebus_sabaeus
ENSMZEG00005016135	srrt	67	74.561	ENSCPBG00000011553	SRRT	85	64.029	Chrysemys_picta_bellii
ENSMZEG00005016135	srrt	96	40.405	ENSCING00000003506	-	54	50.622	Ciona_intestinalis
ENSMZEG00005016135	srrt	96	41.740	ENSCSAVG00000008394	-	81	55.714	Ciona_savignyi
ENSMZEG00005016135	srrt	50	74.675	ENSCANG00000034556	SRRT	53	74.675	Colobus_angolensis_palliatus
ENSMZEG00005016135	srrt	92	64.733	ENSCGRG00001001594	Srrt	53	74.624	Cricetulus_griseus_chok1gshd
ENSMZEG00005016135	srrt	87	80.392	ENSCGRG00000007292	Srrt	89	71.092	Cricetulus_griseus_crigri
ENSMZEG00005016135	srrt	50	63.368	ENSCSEG00000005233	-	54	65.152	Cynoglossus_semilaevis
ENSMZEG00005016135	srrt	94	78.802	ENSCSEG00000017878	srrt	95	78.985	Cynoglossus_semilaevis
ENSMZEG00005016135	srrt	86	54.489	ENSCVAG00000017344	-	52	64.908	Cyprinodon_variegatus
ENSMZEG00005016135	srrt	92	88.796	ENSCVAG00000019848	srrt	95	87.843	Cyprinodon_variegatus
ENSMZEG00005016135	srrt	92	77.374	ENSDARG00000017762	srrt	95	76.616	Danio_rerio
ENSMZEG00005016135	srrt	50	74.409	ENSDNOG00000003851	SRRT	53	74.409	Dasypus_novemcinctus
ENSMZEG00005016135	srrt	50	74.620	ENSDORG00000005584	Srrt	89	71.274	Dipodomys_ordii
ENSMZEG00005016135	srrt	79	52.564	FBgn0033062	Ars2	68	53.165	Drosophila_melanogaster
ENSMZEG00005016135	srrt	71	72.093	ENSETEG00000016175	SRRT	71	72.093	Echinops_telfairi
ENSMZEG00005016135	srrt	60	61.814	ENSEBUG00000008517	-	79	62.527	Eptatretus_burgeri
ENSMZEG00005016135	srrt	92	64.411	ENSEASG00005016956	SRRT	53	74.409	Equus_asinus_asinus
ENSMZEG00005016135	srrt	92	64.527	ENSECAG00000012292	SRRT	53	74.409	Equus_caballus
ENSMZEG00005016135	srrt	77	76.042	ENSEEUG00000009117	SRRT	57	81.081	Erinaceus_europaeus
ENSMZEG00005016135	srrt	89	59.059	ENSELUG00000021216	-	53	68.017	Esox_lucius
ENSMZEG00005016135	srrt	50	74.624	ENSFCAG00000006855	SRRT	53	74.624	Felis_catus
ENSMZEG00005016135	srrt	50	70.640	ENSFDAG00000021347	SRRT	88	67.991	Fukomys_damarensis
ENSMZEG00005016135	srrt	50	57.773	ENSFHEG00000004105	-	93	57.203	Fundulus_heteroclitus
ENSMZEG00005016135	srrt	73	91.270	ENSFHEG00000002756	srrt	90	91.270	Fundulus_heteroclitus
ENSMZEG00005016135	srrt	92	76.010	ENSGMOG00000018619	srrt	51	80.879	Gadus_morhua
ENSMZEG00005016135	srrt	92	87.589	ENSGAFG00000005423	srrt	95	86.874	Gambusia_affinis
ENSMZEG00005016135	srrt	50	63.067	ENSGAFG00000020383	-	54	63.203	Gambusia_affinis
ENSMZEG00005016135	srrt	89	54.599	ENSGACG00000001100	-	52	63.793	Gasterosteus_aculeatus
ENSMZEG00005016135	srrt	50	74.675	ENSGGOG00000001508	SRRT	61	68.478	Gorilla_gorilla
ENSMZEG00005016135	srrt	100	99.341	ENSHBUG00000002942	srrt	100	99.341	Haplochromis_burtoni
ENSMZEG00005016135	srrt	92	64.360	ENSHGLG00000008344	Srrt	89	70.450	Heterocephalus_glaber_female
ENSMZEG00005016135	srrt	92	64.849	ENSHGLG00100018857	Srrt	89	71.212	Heterocephalus_glaber_male
ENSMZEG00005016135	srrt	94	82.867	ENSHCOG00000005403	srrt	95	80.981	Hippocampus_comes
ENSMZEG00005016135	srrt	89	53.922	ENSHCOG00000008904	-	90	63.053	Hippocampus_comes
ENSMZEG00005016135	srrt	50	74.675	ENSSTOG00000013776	SRRT	53	74.675	Ictidomys_tridecemlineatus
ENSMZEG00005016135	srrt	92	64.865	ENSJJAG00000010446	Srrt	89	71.861	Jaculus_jaculus
ENSMZEG00005016135	srrt	92	86.951	ENSKMAG00000013599	srrt	55	91.209	Kryptolebias_marmoratus
ENSMZEG00005016135	srrt	50	64.092	ENSKMAG00000008468	-	53	64.211	Kryptolebias_marmoratus
ENSMZEG00005016135	srrt	94	82.639	ENSLBEG00000016308	srrt	86	91.775	Labrus_bergylta
ENSMZEG00005016135	srrt	92	54.953	ENSLACG00000001089	SRRT	53	57.484	Latimeria_chalumnae
ENSMZEG00005016135	srrt	77	83.861	ENSLOCG00000013658	srrt	74	83.861	Lepisosteus_oculatus
ENSMZEG00005016135	srrt	50	74.624	ENSLAFG00000007725	SRRT	53	74.624	Loxodonta_africana
ENSMZEG00005016135	srrt	50	74.675	ENSMFAG00000033745	SRRT	56	72.939	Macaca_fascicularis
ENSMZEG00005016135	srrt	50	74.409	ENSMMUG00000021255	SRRT	53	74.409	Macaca_mulatta
ENSMZEG00005016135	srrt	50	74.409	ENSMNEG00000041864	SRRT	53	74.409	Macaca_nemestrina
ENSMZEG00005016135	srrt	50	74.675	ENSMLEG00000029479	SRRT	55	72.939	Mandrillus_leucophaeus
ENSMZEG00005016135	srrt	92	88.769	ENSMAMG00000014311	srrt	95	88.889	Mastacembelus_armatus
ENSMZEG00005016135	srrt	89	56.934	ENSMAMG00000010681	-	52	66.450	Mastacembelus_armatus
ENSMZEG00005016135	srrt	50	65.665	ENSMZEG00005028002	-	52	65.652	Maylandia_zebra
ENSMZEG00005016135	srrt	50	74.194	ENSMAUG00000011386	Srrt	89	70.851	Mesocricetus_auratus
ENSMZEG00005016135	srrt	50	74.194	ENSMICG00000009471	SRRT	55	72.727	Microcebus_murinus
ENSMZEG00005016135	srrt	50	74.409	ENSMOCG00000001971	Srrt	89	71.613	Microtus_ochrogaster
ENSMZEG00005016135	srrt	92	82.536	ENSMMOG00000016399	srrt	87	90.110	Mola_mola
ENSMZEG00005016135	srrt	80	56.117	ENSMMOG00000011137	-	55	66.885	Mola_mola
ENSMZEG00005016135	srrt	50	70.513	ENSMODG00000004862	SRRT	89	71.154	Monodelphis_domestica
ENSMZEG00005016135	srrt	52	51.992	ENSMALG00000005567	-	84	53.744	Monopterus_albus
ENSMZEG00005016135	srrt	87	82.272	ENSMALG00000018604	srrt	86	87.033	Monopterus_albus
ENSMZEG00005016135	srrt	92	65.452	MGP_CAROLIEiJ_G0027870	Srrt	99	72.015	Mus_caroli
ENSMZEG00005016135	srrt	92	65.452	ENSMUSG00000037364	Srrt	99	72.015	Mus_musculus
ENSMZEG00005016135	srrt	92	64.865	MGP_PahariEiJ_G0024456	Srrt	99	72.015	Mus_pahari
ENSMZEG00005016135	srrt	92	65.452	MGP_SPRETEiJ_G0028875	Srrt	99	72.015	Mus_spretus
ENSMZEG00005016135	srrt	92	64.855	ENSMPUG00000015839	SRRT	53	74.409	Mustela_putorius_furo
ENSMZEG00005016135	srrt	50	74.194	ENSMLUG00000009975	SRRT	53	74.194	Myotis_lucifugus
ENSMZEG00005016135	srrt	92	64.535	ENSNGAG00000023715	Srrt	64	74.409	Nannospalax_galili
ENSMZEG00005016135	srrt	96	96.811	ENSNBRG00000019100	srrt	100	96.811	Neolamprologus_brichardi
ENSMZEG00005016135	srrt	80	65.275	ENSNLEG00000011987	SRRT	90	64.348	Nomascus_leucogenys
ENSMZEG00005016135	srrt	92	54.918	ENSMEUG00000011941	SRRT	52	61.207	Notamacropus_eugenii
ENSMZEG00005016135	srrt	59	72.727	ENSOPRG00000002502	-	67	74.242	Ochotona_princeps
ENSMZEG00005016135	srrt	50	75.385	ENSODEG00000016856	SRRT	89	71.429	Octodon_degus
ENSMZEG00005016135	srrt	89	55.042	ENSONIG00000016080	-	52	66.237	Oreochromis_niloticus
ENSMZEG00005016135	srrt	96	98.860	ENSONIG00000004242	srrt	100	95.551	Oreochromis_niloticus
ENSMZEG00005016135	srrt	94	87.063	ENSORLG00000008120	srrt	52	91.429	Oryzias_latipes
ENSMZEG00005016135	srrt	94	87.063	ENSORLG00020003058	srrt	52	91.648	Oryzias_latipes_hni
ENSMZEG00005016135	srrt	94	86.946	ENSORLG00015008062	srrt	52	91.648	Oryzias_latipes_hsok
ENSMZEG00005016135	srrt	94	86.729	ENSOMEG00000003155	srrt	90	91.209	Oryzias_melastigma
ENSMZEG00005016135	srrt	89	58.202	ENSOMEG00000006963	-	53	66.812	Oryzias_melastigma
ENSMZEG00005016135	srrt	50	74.409	ENSOGAG00000017242	SRRT	53	74.409	Otolemur_garnettii
ENSMZEG00005016135	srrt	50	74.459	ENSOARG00000015645	SRRT	53	74.459	Ovis_aries
ENSMZEG00005016135	srrt	50	74.675	ENSPPAG00000041090	SRRT	53	74.675	Pan_paniscus
ENSMZEG00005016135	srrt	50	74.892	ENSPPRG00000009557	SRRT	53	74.459	Panthera_pardus
ENSMZEG00005016135	srrt	50	74.624	ENSPTIG00000014355	SRRT	53	74.624	Panthera_tigris_altaica
ENSMZEG00005016135	srrt	50	74.675	ENSPTRG00000019511	SRRT	53	74.675	Pan_troglodytes
ENSMZEG00005016135	srrt	50	72.939	ENSPANG00000020763	SRRT	54	72.939	Papio_anubis
ENSMZEG00005016135	srrt	90	70.433	ENSPKIG00000022212	-	52	80.220	Paramormyrops_kingsleyae
ENSMZEG00005016135	srrt	94	72.676	ENSPKIG00000005434	srrt	50	82.340	Paramormyrops_kingsleyae
ENSMZEG00005016135	srrt	50	75.771	ENSPSIG00000016311	SRRT	52	75.771	Pelodiscus_sinensis
ENSMZEG00005016135	srrt	50	75.604	ENSPEMG00000010834	Srrt	89	71.429	Peromyscus_maniculatus_bairdii
ENSMZEG00005016135	srrt	92	53.749	ENSPMAG00000009614	-	55	63.270	Petromyzon_marinus
ENSMZEG00005016135	srrt	92	64.761	ENSPCIG00000000816	SRRT	53	72.591	Phascolarctos_cinereus
ENSMZEG00005016135	srrt	92	87.843	ENSPFOG00000005704	srrt	95	87.128	Poecilia_formosa
ENSMZEG00005016135	srrt	92	85.024	ENSPLAG00000021992	srrt	95	83.608	Poecilia_latipinna
ENSMZEG00005016135	srrt	92	87.604	ENSPMEG00000001182	srrt	95	86.889	Poecilia_mexicana
ENSMZEG00005016135	srrt	92	87.485	ENSPREG00000022308	srrt	95	86.770	Poecilia_reticulata
ENSMZEG00005016135	srrt	50	72.516	ENSPCAG00000001621	SRRT	53	72.516	Procavia_capensis
ENSMZEG00005016135	srrt	50	74.675	ENSPCOG00000025751	SRRT	53	74.675	Propithecus_coquereli
ENSMZEG00005016135	srrt	64	66.452	ENSPVAG00000000834	SRRT	88	66.452	Pteropus_vampyrus
ENSMZEG00005016135	srrt	96	99.658	ENSPNYG00000018710	srrt	100	99.658	Pundamilia_nyererei
ENSMZEG00005016135	srrt	86	89.241	ENSPNAG00000010629	srrt	94	59.695	Pygocentrus_nattereri
ENSMZEG00005016135	srrt	50	65.284	ENSRNOG00000048277	AABR07035787.1	92	65.284	Rattus_norvegicus
ENSMZEG00005016135	srrt	50	74.409	ENSRBIG00000035718	SRRT	67	67.204	Rhinopithecus_bieti
ENSMZEG00005016135	srrt	50	74.409	ENSRROG00000030622	SRRT	67	67.204	Rhinopithecus_roxellana
ENSMZEG00005016135	srrt	50	74.675	ENSSBOG00000033570	SRRT	53	74.675	Saimiri_boliviensis_boliviensis
ENSMZEG00005016135	srrt	69	62.423	ENSSHAG00000007349	-	74	72.495	Sarcophilus_harrisii
ENSMZEG00005016135	srrt	90	77.300	ENSSFOG00015017293	srrt	51	85.463	Scleropages_formosus
ENSMZEG00005016135	srrt	92	89.486	ENSSMAG00000015342	srrt	93	92.967	Scophthalmus_maximus
ENSMZEG00005016135	srrt	50	63.002	ENSSMAG00000018195	-	57	63.931	Scophthalmus_maximus
ENSMZEG00005016135	srrt	92	91.050	ENSSDUG00000012049	srrt	98	90.233	Seriola_dumerili
ENSMZEG00005016135	srrt	50	54.757	ENSSDUG00000002051	-	93	55.603	Seriola_dumerili
ENSMZEG00005016135	srrt	80	93.382	ENSSLDG00000017477	srrt	86	93.382	Seriola_lalandi_dorsalis
ENSMZEG00005016135	srrt	50	57.826	ENSSPAG00000018943	-	93	57.826	Stegastes_partitus
ENSMZEG00005016135	srrt	92	90.736	ENSSPAG00000005665	srrt	94	90.974	Stegastes_partitus
ENSMZEG00005016135	srrt	87	54.161	ENSTRUG00000000023	-	51	61.327	Takifugu_rubripes
ENSMZEG00005016135	srrt	71	75.486	ENSTNIG00000011779	srrt	73	87.633	Tetraodon_nigroviridis
ENSMZEG00005016135	srrt	89	54.070	ENSTNIG00000003111	-	53	63.853	Tetraodon_nigroviridis
ENSMZEG00005016135	srrt	56	76.554	ENSTBEG00000005212	SRRT	57	76.554	Tupaia_belangeri
ENSMZEG00005016135	srrt	50	74.409	ENSTTRG00000011104	SRRT	53	74.409	Tursiops_truncatus
ENSMZEG00005016135	srrt	50	74.409	ENSUAMG00000027997	SRRT	55	74.409	Ursus_americanus
ENSMZEG00005016135	srrt	50	74.409	ENSUMAG00000011295	SRRT	53	74.409	Ursus_maritimus
ENSMZEG00005016135	srrt	92	65.157	ENSVVUG00000023572	SRRT	53	74.409	Vulpes_vulpes
ENSMZEG00005016135	srrt	69	75.843	ENSXETG00000025124	srrt	71	75.796	Xenopus_tropicalis
ENSMZEG00005016135	srrt	51	52.321	ENSXCOG00000013105	-	91	53.261	Xiphophorus_couchianus
ENSMZEG00005016135	srrt	89	54.921	ENSXMAG00000002090	-	54	63.853	Xiphophorus_maculatus
ENSMZEG00005016135	srrt	94	87.776	ENSXMAG00000007627	srrt	95	86.754	Xiphophorus_maculatus