EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005016210 (Gene tree)
Gene ID: 101486947
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 28240 bases
Position: chrLG7:1375095-1403334
Accession: 101486947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005021617	Not1	PF04054.15	4.2e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005022327	-	6822	XM_004569178	ENSMZEP00005021617	2273 (aa)	XP_004569235	-

Gene Model

Click here to download ENSMZEG00005016210's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005016210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005016210	cnot1	100	97.055	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSMZEG00005016210	cnot1	100	94.991	ENSAPOG00000005042	cnot1	100	94.991	Acanthochromis_polyacanthus
ENSMZEG00005016210	cnot1	100	97.055	ENSAMEG00000017298	CNOT1	97	97.055	Ailuropoda_melanoleuca
ENSMZEG00005016210	cnot1	91	98.177	ENSACIG00000016003	cnot1	97	98.177	Amphilophus_citrinellus
ENSMZEG00005016210	cnot1	100	91.074	ENSAPEG00000022342	cnot1	100	91.074	Amphiprion_percula
ENSMZEG00005016210	cnot1	100	95.209	ENSATEG00000012892	cnot1	100	95.209	Anabas_testudineus
ENSMZEG00005016210	cnot1	100	96.078	ENSAPLG00000007162	CNOT1	97	97.059	Anas_platyrhynchos
ENSMZEG00005016210	cnot1	90	77.727	ENSACAG00000001602	CNOT1	98	77.660	Anolis_carolinensis
ENSMZEG00005016210	cnot1	100	87.845	ENSANAG00000038198	CNOT1	97	87.845	Aotus_nancymaae
ENSMZEG00005016210	cnot1	100	98.138	ENSACLG00000014234	cnot1	100	98.138	Astatotilapia_calliptera
ENSMZEG00005016210	cnot1	100	89.828	ENSAMXG00000013170	cnot1	100	90.122	Astyanax_mexicanus
ENSMZEG00005016210	cnot1	100	97.055	ENSBTAG00000020782	CNOT1	97	97.055	Bos_taurus
ENSMZEG00005016210	cnot1	77	44.202	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSMZEG00005016210	cnot1	100	97.055	ENSCJAG00000011318	CNOT1	97	97.055	Callithrix_jacchus
ENSMZEG00005016210	cnot1	100	96.100	ENSCAFG00000008426	CNOT1	97	96.100	Canis_familiaris
ENSMZEG00005016210	cnot1	100	94.825	ENSCAFG00020010156	CNOT1	97	94.825	Canis_lupus_dingo
ENSMZEG00005016210	cnot1	100	97.055	ENSCHIG00000010452	CNOT1	97	97.055	Capra_hircus
ENSMZEG00005016210	cnot1	100	97.055	ENSTSYG00000006888	CNOT1	97	97.055	Carlito_syrichta
ENSMZEG00005016210	cnot1	100	97.195	ENSCPOG00000013026	CNOT1	97	97.195	Cavia_porcellus
ENSMZEG00005016210	cnot1	100	97.055	ENSCCAG00000026333	CNOT1	97	97.055	Cebus_capucinus
ENSMZEG00005016210	cnot1	100	97.055	ENSCATG00000032625	CNOT1	97	97.055	Cercocebus_atys
ENSMZEG00005016210	cnot1	100	97.195	ENSCLAG00000006289	CNOT1	97	97.195	Chinchilla_lanigera
ENSMZEG00005016210	cnot1	100	97.055	ENSCSAG00000004731	CNOT1	97	97.055	Chlorocebus_sabaeus
ENSMZEG00005016210	cnot1	79	97.727	ENSCHOG00000009712	CNOT1	80	97.527	Choloepus_hoffmanni
ENSMZEG00005016210	cnot1	98	96.914	ENSCPBG00000026222	CNOT1	96	96.914	Chrysemys_picta_bellii
ENSMZEG00005016210	cnot1	100	56.071	ENSCING00000009149	-	100	56.113	Ciona_intestinalis
ENSMZEG00005016210	cnot1	90	77.019	ENSCSAVG00000002414	-	97	77.019	Ciona_savignyi
ENSMZEG00005016210	cnot1	100	96.111	ENSCANG00000040534	CNOT1	97	96.111	Colobus_angolensis_palliatus
ENSMZEG00005016210	cnot1	100	96.914	ENSCGRG00001016365	Cnot1	97	96.914	Cricetulus_griseus_chok1gshd
ENSMZEG00005016210	cnot1	100	96.914	ENSCGRG00000001714	Cnot1	97	96.914	Cricetulus_griseus_crigri
ENSMZEG00005016210	cnot1	100	93.463	ENSCVAG00000018930	cnot1	100	93.463	Cyprinodon_variegatus
ENSMZEG00005016210	cnot1	100	88.805	ENSDARG00000004174	cnot1	100	88.553	Danio_rerio
ENSMZEG00005016210	cnot1	100	94.258	ENSDNOG00000013250	CNOT1	97	94.258	Dasypus_novemcinctus
ENSMZEG00005016210	cnot1	99	45.422	FBgn0085436	Not1	99	47.655	Drosophila_melanogaster
ENSMZEG00005016210	cnot1	86	94.880	ENSETEG00000012806	CNOT1	84	94.880	Echinops_telfairi
ENSMZEG00005016210	cnot1	83	76.042	ENSEBUG00000011534	cnot1	95	76.042	Eptatretus_burgeri
ENSMZEG00005016210	cnot1	100	97.055	ENSEASG00005005819	CNOT1	97	97.055	Equus_asinus_asinus
ENSMZEG00005016210	cnot1	100	97.055	ENSECAG00000009889	CNOT1	97	97.055	Equus_caballus
ENSMZEG00005016210	cnot1	87	98.667	ENSEEUG00000006015	CNOT1	85	98.667	Erinaceus_europaeus
ENSMZEG00005016210	cnot1	100	96.866	ENSELUG00000014085	cnot1	97	96.866	Esox_lucius
ENSMZEG00005016210	cnot1	100	96.111	ENSFCAG00000025155	CNOT1	97	97.055	Felis_catus
ENSMZEG00005016210	cnot1	100	97.055	ENSFALG00000007285	CNOT1	97	97.055	Ficedula_albicollis
ENSMZEG00005016210	cnot1	100	97.195	ENSFDAG00000013399	CNOT1	97	97.195	Fukomys_damarensis
ENSMZEG00005016210	cnot1	100	90.306	ENSFHEG00000020574	cnot1	100	90.306	Fundulus_heteroclitus
ENSMZEG00005016210	cnot1	90	99.385	ENSGMOG00000012864	cnot1	99	99.385	Gadus_morhua
ENSMZEG00005016210	cnot1	100	97.055	ENSGALG00000002301	CNOT1	97	97.055	Gallus_gallus
ENSMZEG00005016210	cnot1	100	99.018	ENSGAFG00000015005	cnot1	97	99.018	Gambusia_affinis
ENSMZEG00005016210	cnot1	90	90.324	ENSGACG00000002606	cnot1	100	90.655	Gasterosteus_aculeatus
ENSMZEG00005016210	cnot1	100	96.914	ENSGAGG00000022646	CNOT1	97	96.914	Gopherus_agassizii
ENSMZEG00005016210	cnot1	100	97.055	ENSGGOG00000009547	CNOT1	97	97.055	Gorilla_gorilla
ENSMZEG00005016210	cnot1	100	97.835	ENSHBUG00000001729	cnot1	100	97.835	Haplochromis_burtoni
ENSMZEG00005016210	cnot1	100	97.195	ENSHGLG00000014322	CNOT1	97	97.195	Heterocephalus_glaber_female
ENSMZEG00005016210	cnot1	100	89.828	ENSHCOG00000006501	cnot1	100	89.703	Hippocampus_comes
ENSMZEG00005016210	cnot1	100	87.820	ENSIPUG00000011915	cnot1	100	87.778	Ictalurus_punctatus
ENSMZEG00005016210	cnot1	100	97.195	ENSSTOG00000005490	CNOT1	97	97.195	Ictidomys_tridecemlineatus
ENSMZEG00005016210	cnot1	100	96.494	ENSJJAG00000000633	Cnot1	97	96.494	Jaculus_jaculus
ENSMZEG00005016210	cnot1	100	90.448	ENSKMAG00000006149	cnot1	100	90.113	Kryptolebias_marmoratus
ENSMZEG00005016210	cnot1	95	98.410	ENSLBEG00000004740	cnot1	100	98.802	Labrus_bergylta
ENSMZEG00005016210	cnot1	100	97.055	ENSLACG00000010869	CNOT1	99	97.055	Latimeria_chalumnae
ENSMZEG00005016210	cnot1	100	99.439	ENSLOCG00000006324	cnot1	97	99.439	Lepisosteus_oculatus
ENSMZEG00005016210	cnot1	100	96.914	ENSLAFG00000000098	CNOT1	97	96.914	Loxodonta_africana
ENSMZEG00005016210	cnot1	100	97.055	ENSMFAG00000035888	CNOT1	97	97.055	Macaca_fascicularis
ENSMZEG00005016210	cnot1	100	97.055	ENSMMUG00000014625	CNOT1	97	97.055	Macaca_mulatta
ENSMZEG00005016210	cnot1	100	96.111	ENSMNEG00000031820	CNOT1	97	97.055	Macaca_nemestrina
ENSMZEG00005016210	cnot1	100	92.500	ENSMLEG00000040933	CNOT1	97	92.500	Mandrillus_leucophaeus
ENSMZEG00005016210	cnot1	100	89.095	ENSMAMG00000016524	cnot1	100	89.095	Mastacembelus_armatus
ENSMZEG00005016210	cnot1	100	97.055	ENSMGAG00000001908	CNOT1	97	97.055	Meleagris_gallopavo
ENSMZEG00005016210	cnot1	100	97.055	ENSMICG00000007071	CNOT1	97	97.055	Microcebus_murinus
ENSMZEG00005016210	cnot1	100	96.914	ENSMOCG00000017969	Cnot1	97	96.914	Microtus_ochrogaster
ENSMZEG00005016210	cnot1	100	93.653	ENSMMOG00000019134	cnot1	100	93.653	Mola_mola
ENSMZEG00005016210	cnot1	100	96.078	ENSMODG00000014199	CNOT1	97	97.059	Monodelphis_domestica
ENSMZEG00005016210	cnot1	100	89.684	ENSMALG00000008645	cnot1	100	89.853	Monopterus_albus
ENSMZEG00005016210	cnot1	99	97.115	MGP_CAROLIEiJ_G0031430	Cnot1	92	97.115	Mus_caroli
ENSMZEG00005016210	cnot1	100	96.914	ENSMUSG00000036550	Cnot1	97	96.914	Mus_musculus
ENSMZEG00005016210	cnot1	100	96.914	MGP_PahariEiJ_G0023028	Cnot1	97	96.914	Mus_pahari
ENSMZEG00005016210	cnot1	100	96.914	MGP_SPRETEiJ_G0032549	Cnot1	97	96.914	Mus_spretus
ENSMZEG00005016210	cnot1	100	97.055	ENSMPUG00000004830	CNOT1	97	97.055	Mustela_putorius_furo
ENSMZEG00005016210	cnot1	100	96.914	ENSMLUG00000003728	CNOT1	97	96.914	Myotis_lucifugus
ENSMZEG00005016210	cnot1	100	97.055	ENSNGAG00000018628	Cnot1	97	97.055	Nannospalax_galili
ENSMZEG00005016210	cnot1	97	96.439	ENSNBRG00000019358	cnot1	100	96.439	Neolamprologus_brichardi
ENSMZEG00005016210	cnot1	100	97.055	ENSNLEG00000003566	CNOT1	97	97.055	Nomascus_leucogenys
ENSMZEG00005016210	cnot1	86	91.121	ENSMEUG00000006145	CNOT1	84	91.121	Notamacropus_eugenii
ENSMZEG00005016210	cnot1	85	97.778	ENSOPRG00000005604	CNOT1	81	97.778	Ochotona_princeps
ENSMZEG00005016210	cnot1	100	97.195	ENSODEG00000016337	CNOT1	97	97.195	Octodon_degus
ENSMZEG00005016210	cnot1	100	93.910	ENSONIG00000007358	cnot1	100	93.910	Oreochromis_niloticus
ENSMZEG00005016210	cnot1	91	96.774	ENSOANG00000012109	CNOT1	97	96.774	Ornithorhynchus_anatinus
ENSMZEG00005016210	cnot1	100	97.055	ENSOCUG00000006911	CNOT1	97	97.055	Oryctolagus_cuniculus
ENSMZEG00005016210	cnot1	100	90.180	ENSORLG00000013734	cnot1	100	90.390	Oryzias_latipes
ENSMZEG00005016210	cnot1	100	88.441	ENSORLG00020017012	cnot1	100	88.651	Oryzias_latipes_hni
ENSMZEG00005016210	cnot1	100	88.314	ENSORLG00015007091	cnot1	100	88.525	Oryzias_latipes_hsok
ENSMZEG00005016210	cnot1	100	88.218	ENSOMEG00000015124	cnot1	100	88.203	Oryzias_melastigma
ENSMZEG00005016210	cnot1	100	97.055	ENSOGAG00000000543	CNOT1	97	97.055	Otolemur_garnettii
ENSMZEG00005016210	cnot1	100	97.055	ENSOARG00000001567	CNOT1	97	97.055	Ovis_aries
ENSMZEG00005016210	cnot1	100	97.055	ENSPPAG00000022013	CNOT1	97	97.055	Pan_paniscus
ENSMZEG00005016210	cnot1	100	97.055	ENSPPRG00000004867	CNOT1	97	97.055	Panthera_pardus
ENSMZEG00005016210	cnot1	100	97.055	ENSPTIG00000012589	CNOT1	97	97.055	Panthera_tigris_altaica
ENSMZEG00005016210	cnot1	100	96.111	ENSPTRG00000008183	CNOT1	97	96.111	Pan_troglodytes
ENSMZEG00005016210	cnot1	100	84.380	ENSPANG00000020901	CNOT1	100	84.696	Papio_anubis
ENSMZEG00005016210	cnot1	99	86.874	ENSPKIG00000002914	CNOT1	99	87.030	Paramormyrops_kingsleyae
ENSMZEG00005016210	cnot1	100	98.457	ENSPKIG00000023538	CNOT1	97	98.457	Paramormyrops_kingsleyae
ENSMZEG00005016210	cnot1	100	97.055	ENSPSIG00000005499	CNOT1	97	97.055	Pelodiscus_sinensis
ENSMZEG00005016210	cnot1	100	72.693	ENSPMAG00000009381	cnot1	100	72.834	Petromyzon_marinus
ENSMZEG00005016210	cnot1	100	97.195	ENSPCIG00000007343	CNOT1	97	97.195	Phascolarctos_cinereus
ENSMZEG00005016210	cnot1	99	89.451	ENSPFOG00000003497	cnot1	100	89.725	Poecilia_formosa
ENSMZEG00005016210	cnot1	95	97.813	ENSPLAG00000014018	cnot1	100	97.813	Poecilia_latipinna
ENSMZEG00005016210	cnot1	95	97.813	ENSPMEG00000005868	cnot1	100	98.204	Poecilia_mexicana
ENSMZEG00005016210	cnot1	95	98.204	ENSPREG00000018793	cnot1	100	98.204	Poecilia_reticulata
ENSMZEG00005016210	cnot1	100	97.055	ENSPPYG00000007410	CNOT1	97	97.055	Pongo_abelii
ENSMZEG00005016210	cnot1	87	93.662	ENSPCAG00000003241	CNOT1	86	93.662	Procavia_capensis
ENSMZEG00005016210	cnot1	100	96.111	ENSPCOG00000027139	CNOT1	97	96.111	Propithecus_coquereli
ENSMZEG00005016210	cnot1	100	89.762	ENSPVAG00000004243	CNOT1	97	89.762	Pteropus_vampyrus
ENSMZEG00005016210	cnot1	100	97.791	ENSPNYG00000012919	cnot1	100	97.791	Pundamilia_nyererei
ENSMZEG00005016210	cnot1	100	88.753	ENSPNAG00000000246	cnot1	100	88.753	Pygocentrus_nattereri
ENSMZEG00005016210	cnot1	100	96.774	ENSRNOG00000012271	Cnot1	97	96.774	Rattus_norvegicus
ENSMZEG00005016210	cnot1	100	96.111	ENSRBIG00000044598	CNOT1	97	96.111	Rhinopithecus_bieti
ENSMZEG00005016210	cnot1	100	97.055	ENSRROG00000000906	CNOT1	97	97.055	Rhinopithecus_roxellana
ENSMZEG00005016210	cnot1	57	34.074	YCR093W	CDC39	60	34.074	Saccharomyces_cerevisiae
ENSMZEG00005016210	cnot1	100	92.287	ENSSBOG00000029155	CNOT1	97	92.287	Saimiri_boliviensis_boliviensis
ENSMZEG00005016210	cnot1	100	97.195	ENSSHAG00000012187	CNOT1	97	97.195	Sarcophilus_harrisii
ENSMZEG00005016210	cnot1	100	92.847	ENSSFOG00015017614	cnot1	97	92.847	Scleropages_formosus
ENSMZEG00005016210	cnot1	100	94.209	ENSSMAG00000013844	cnot1	100	94.209	Scophthalmus_maximus
ENSMZEG00005016210	cnot1	100	94.864	ENSSDUG00000021491	cnot1	100	94.864	Seriola_dumerili
ENSMZEG00005016210	cnot1	100	95.080	ENSSLDG00000014816	cnot1	100	95.080	Seriola_lalandi_dorsalis
ENSMZEG00005016210	cnot1	86	97.800	ENSSARG00000000762	CNOT1	88	97.800	Sorex_araneus
ENSMZEG00005016210	cnot1	100	90.951	ENSSPAG00000018802	cnot1	100	90.951	Stegastes_partitus
ENSMZEG00005016210	cnot1	100	96.914	ENSSSCG00000002799	CNOT1	97	96.914	Sus_scrofa
ENSMZEG00005016210	cnot1	100	97.055	ENSTGUG00000005919	CNOT1	97	97.055	Taeniopygia_guttata
ENSMZEG00005016210	cnot1	100	99.018	ENSTNIG00000018706	cnot1	97	99.018	Tetraodon_nigroviridis
ENSMZEG00005016210	cnot1	80	97.887	ENSTBEG00000000720	CNOT1	76	97.887	Tupaia_belangeri
ENSMZEG00005016210	cnot1	95	97.055	ENSTTRG00000008460	CNOT1	92	97.055	Tursiops_truncatus
ENSMZEG00005016210	cnot1	100	97.055	ENSUAMG00000009251	CNOT1	97	97.055	Ursus_americanus
ENSMZEG00005016210	cnot1	100	97.055	ENSUMAG00000021291	CNOT1	97	97.055	Ursus_maritimus
ENSMZEG00005016210	cnot1	97	93.689	ENSVPAG00000008846	CNOT1	94	93.689	Vicugna_pacos
ENSMZEG00005016210	cnot1	100	94.825	ENSVVUG00000024037	CNOT1	97	94.825	Vulpes_vulpes
ENSMZEG00005016210	cnot1	100	89.356	ENSXETG00000015900	cnot1	100	74.676	Xenopus_tropicalis
ENSMZEG00005016210	cnot1	100	89.226	ENSXCOG00000013552	cnot1	100	89.268	Xiphophorus_couchianus
ENSMZEG00005016210	cnot1	100	89.268	ENSXMAG00000006031	cnot1	100	89.310	Xiphophorus_maculatus