EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005016304 (Gene tree)
Gene ID: 101480146
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 13801 bases
Position: chrLG11:17913924-17927724
Accession: 101480146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005021754	Not3	PF04065.15	5.1e-97	1	1
ENSMZEP00005021749	Not3	PF04065.15	5.2e-97	1	1
ENSMZEP00005021754	NOT2_3_5	PF04153.18	2.1e-38	1	1
ENSMZEP00005021749	NOT2_3_5	PF04153.18	2.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005022462	-	6599	XM_012924986	ENSMZEP00005021749	911 (aa)	XP_012780440	UPI00064771E0
ENSMZET00005022467	-	6542	XM_012924987	ENSMZEP00005021754	892 (aa)	XP_012780441	UPI000646BB22

Gene Model

Click here to download ENSMZEG00005016304's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005016304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005016304	cnot3a	68	89.836	ENSG00000088038	CNOT3	100	93.814	Homo_sapiens
ENSMZEG00005016304	cnot3a	58	87.197	ENSAPOG00000015002	cnot3b	76	89.531	Acanthochromis_polyacanthus
ENSMZEG00005016304	cnot3a	59	90.391	ENSAPOG00000015499	CNOT3	92	90.391	Acanthochromis_polyacanthus
ENSMZEG00005016304	cnot3a	68	90.164	ENSAMEG00000004528	CNOT3	85	90.461	Ailuropoda_melanoleuca
ENSMZEG00005016304	cnot3a	68	92.411	ENSACIG00000003652	cnot3b	79	85.772	Amphilophus_citrinellus
ENSMZEG00005016304	cnot3a	100	97.593	ENSACIG00000006635	cnot3a	100	97.593	Amphilophus_citrinellus
ENSMZEG00005016304	cnot3a	99	89.024	ENSAOCG00000023769	cnot3a	99	89.812	Amphiprion_ocellaris
ENSMZEG00005016304	cnot3a	97	59.140	ENSAOCG00000018385	-	88	76.786	Amphiprion_ocellaris
ENSMZEG00005016304	cnot3a	97	61.695	ENSAPEG00000002640	cnot3b	80	85.593	Amphiprion_percula
ENSMZEG00005016304	cnot3a	100	93.194	ENSAPEG00000006624	cnot3a	100	91.987	Amphiprion_percula
ENSMZEG00005016304	cnot3a	100	92.105	ENSATEG00000022737	cnot3a	100	92.654	Anabas_testudineus
ENSMZEG00005016304	cnot3a	69	89.610	ENSACAG00000016085	CNOT3	88	90.132	Anolis_carolinensis
ENSMZEG00005016304	cnot3a	68	89.836	ENSANAG00000025756	CNOT3	84	90.132	Aotus_nancymaae
ENSMZEG00005016304	cnot3a	100	100.000	ENSACLG00000021136	cnot3a	100	100.000	Astatotilapia_calliptera
ENSMZEG00005016304	cnot3a	100	75.268	ENSAMXG00000012359	cnot3a	100	73.369	Astyanax_mexicanus
ENSMZEG00005016304	cnot3a	100	68.259	ENSAMXG00000009447	cnot3b	70	91.351	Astyanax_mexicanus
ENSMZEG00005016304	cnot3a	68	88.746	ENSBTAG00000014900	CNOT3	85	90.132	Bos_taurus
ENSMZEG00005016304	cnot3a	68	89.836	ENSCJAG00000001094	CNOT3	84	90.132	Callithrix_jacchus
ENSMZEG00005016304	cnot3a	68	89.836	ENSCAFG00000002699	CNOT3	84	90.132	Canis_familiaris
ENSMZEG00005016304	cnot3a	68	89.836	ENSCAFG00020018359	CNOT3	84	90.132	Canis_lupus_dingo
ENSMZEG00005016304	cnot3a	63	86.774	ENSCHIG00000015302	CNOT3	77	88.119	Capra_hircus
ENSMZEG00005016304	cnot3a	68	89.836	ENSTSYG00000008058	CNOT3	85	90.132	Carlito_syrichta
ENSMZEG00005016304	cnot3a	100	57.064	ENSCAPG00000009533	CNOT3	85	90.132	Cavia_aperea
ENSMZEG00005016304	cnot3a	76	74.937	ENSCPOG00000020741	CNOT3	85	90.132	Cavia_porcellus
ENSMZEG00005016304	cnot3a	68	89.836	ENSCCAG00000036290	CNOT3	84	90.132	Cebus_capucinus
ENSMZEG00005016304	cnot3a	68	89.836	ENSCATG00000030324	CNOT3	85	90.132	Cercocebus_atys
ENSMZEG00005016304	cnot3a	76	88.746	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSMZEG00005016304	cnot3a	68	89.836	ENSCSAG00000001900	CNOT3	85	90.132	Chlorocebus_sabaeus
ENSMZEG00005016304	cnot3a	69	89.286	ENSCPBG00000011655	CNOT3	88	90.132	Chrysemys_picta_bellii
ENSMZEG00005016304	cnot3a	57	67.769	ENSCING00000000293	-	71	67.769	Ciona_intestinalis
ENSMZEG00005016304	cnot3a	68	88.424	ENSCANG00000013408	CNOT3	85	90.132	Colobus_angolensis_palliatus
ENSMZEG00005016304	cnot3a	63	90.551	ENSCGRG00001000855	Cnot3	85	90.461	Cricetulus_griseus_chok1gshd
ENSMZEG00005016304	cnot3a	100	91.027	ENSCSEG00000003574	cnot3a	100	92.000	Cynoglossus_semilaevis
ENSMZEG00005016304	cnot3a	100	58.082	ENSCSEG00000016892	cnot3b	72	80.921	Cynoglossus_semilaevis
ENSMZEG00005016304	cnot3a	100	87.706	ENSCVAG00000008168	cnot3a	100	87.596	Cyprinodon_variegatus
ENSMZEG00005016304	cnot3a	100	75.136	ENSDARG00000007135	cnot3a	100	74.810	Danio_rerio
ENSMZEG00005016304	cnot3a	68	89.836	ENSDNOG00000045972	CNOT3	85	90.132	Dasypus_novemcinctus
ENSMZEG00005016304	cnot3a	68	89.836	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSMZEG00005016304	cnot3a	50	66.667	FBgn0033029	Not3	50	67.323	Drosophila_melanogaster
ENSMZEG00005016304	cnot3a	52	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSMZEG00005016304	cnot3a	71	72.727	ENSEBUG00000010437	cnot3a	82	70.130	Eptatretus_burgeri
ENSMZEG00005016304	cnot3a	68	89.836	ENSEASG00005021591	CNOT3	84	90.132	Equus_asinus_asinus
ENSMZEG00005016304	cnot3a	68	89.836	ENSECAG00000023181	CNOT3	84	90.132	Equus_caballus
ENSMZEG00005016304	cnot3a	100	80.256	ENSELUG00000014743	cnot3a	100	81.090	Esox_lucius
ENSMZEG00005016304	cnot3a	68	88.746	ENSFCAG00000014042	CNOT3	85	90.132	Felis_catus
ENSMZEG00005016304	cnot3a	100	85.636	ENSFHEG00000023166	cnot3a	96	98.718	Fundulus_heteroclitus
ENSMZEG00005016304	cnot3a	94	81.112	ENSGMOG00000005365	cnot3a	98	80.997	Gadus_morhua
ENSMZEG00005016304	cnot3a	100	88.925	ENSGAFG00000013094	cnot3a	100	88.268	Gambusia_affinis
ENSMZEG00005016304	cnot3a	94	82.867	ENSGACG00000011489	cnot3a	98	83.566	Gasterosteus_aculeatus
ENSMZEG00005016304	cnot3a	65	88.235	ENSGAGG00000012677	CNOT3	87	87.558	Gopherus_agassizii
ENSMZEG00005016304	cnot3a	68	89.836	ENSGGOG00000012996	CNOT3	84	90.132	Gorilla_gorilla
ENSMZEG00005016304	cnot3a	100	99.890	ENSHBUG00000005275	cnot3a	100	99.890	Haplochromis_burtoni
ENSMZEG00005016304	cnot3a	68	88.746	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSMZEG00005016304	cnot3a	61	83.908	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSMZEG00005016304	cnot3a	100	84.316	ENSHCOG00000020968	cnot3a	100	85.651	Hippocampus_comes
ENSMZEG00005016304	cnot3a	100	67.573	ENSIPUG00000000167	cnot3	100	67.422	Ictalurus_punctatus
ENSMZEG00005016304	cnot3a	68	89.836	ENSSTOG00000028248	CNOT3	85	90.132	Ictidomys_tridecemlineatus
ENSMZEG00005016304	cnot3a	68	90.164	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSMZEG00005016304	cnot3a	100	91.048	ENSKMAG00000004863	cnot3a	100	91.048	Kryptolebias_marmoratus
ENSMZEG00005016304	cnot3a	83	95.928	ENSLBEG00000017296	cnot3a	95	95.928	Labrus_bergylta
ENSMZEG00005016304	cnot3a	96	65.646	ENSLBEG00000018278	cnot3b	72	90.789	Labrus_bergylta
ENSMZEG00005016304	cnot3a	69	86.817	ENSLACG00000009742	CNOT3	88	88.487	Latimeria_chalumnae
ENSMZEG00005016304	cnot3a	52	94.611	ENSLOCG00000000005	cnot3b	79	92.308	Lepisosteus_oculatus
ENSMZEG00005016304	cnot3a	68	89.542	ENSLAFG00000022133	CNOT3	84	89.836	Loxodonta_africana
ENSMZEG00005016304	cnot3a	68	89.836	ENSMFAG00000040073	CNOT3	85	90.132	Macaca_fascicularis
ENSMZEG00005016304	cnot3a	61	92.437	ENSMMUG00000009698	CNOT3	100	95.098	Macaca_mulatta
ENSMZEG00005016304	cnot3a	68	89.836	ENSMNEG00000036750	CNOT3	85	90.132	Macaca_nemestrina
ENSMZEG00005016304	cnot3a	68	89.836	ENSMLEG00000036579	CNOT3	84	90.132	Mandrillus_leucophaeus
ENSMZEG00005016304	cnot3a	100	91.218	ENSMAMG00000019397	cnot3a	100	91.548	Mastacembelus_armatus
ENSMZEG00005016304	cnot3a	63	90.551	ENSMAUG00000014996	Cnot3	85	90.461	Mesocricetus_auratus
ENSMZEG00005016304	cnot3a	68	89.836	ENSMICG00000002370	CNOT3	84	90.132	Microcebus_murinus
ENSMZEG00005016304	cnot3a	62	90.171	ENSMMOG00000013086	cnot3b	75	85.944	Mola_mola
ENSMZEG00005016304	cnot3a	100	89.474	ENSMMOG00000016446	cnot3a	100	90.789	Mola_mola
ENSMZEG00005016304	cnot3a	60	89.836	ENSMODG00000004066	CNOT3	73	90.132	Monodelphis_domestica
ENSMZEG00005016304	cnot3a	100	91.109	ENSMALG00000009204	cnot3a	100	90.999	Monopterus_albus
ENSMZEG00005016304	cnot3a	59	87.162	ENSMALG00000004936	cnot3b	77	86.869	Monopterus_albus
ENSMZEG00005016304	cnot3a	77	74.074	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSMZEG00005016304	cnot3a	77	74.074	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSMZEG00005016304	cnot3a	77	74.074	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSMZEG00005016304	cnot3a	77	74.074	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSMZEG00005016304	cnot3a	68	88.746	ENSMPUG00000010352	CNOT3	85	90.132	Mustela_putorius_furo
ENSMZEG00005016304	cnot3a	68	89.836	ENSNGAG00000013266	Cnot3	85	90.132	Nannospalax_galili
ENSMZEG00005016304	cnot3a	100	99.664	ENSNBRG00000002401	cnot3a	100	99.664	Neolamprologus_brichardi
ENSMZEG00005016304	cnot3a	78	86.992	ENSNBRG00000003336	cnot3b	96	87.415	Neolamprologus_brichardi
ENSMZEG00005016304	cnot3a	66	89.928	ENSNLEG00000006272	CNOT3	84	90.132	Nomascus_leucogenys
ENSMZEG00005016304	cnot3a	98	63.988	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSMZEG00005016304	cnot3a	100	98.686	ENSONIG00000006568	cnot3a	100	98.686	Oreochromis_niloticus
ENSMZEG00005016304	cnot3a	68	89.836	ENSOCUG00000007691	CNOT3	85	90.132	Oryctolagus_cuniculus
ENSMZEG00005016304	cnot3a	100	90.340	ENSORLG00000011174	cnot3a	100	89.791	Oryzias_latipes
ENSMZEG00005016304	cnot3a	100	89.814	ENSORLG00020008009	cnot3a	100	89.485	Oryzias_latipes_hni
ENSMZEG00005016304	cnot3a	100	90.231	ENSORLG00015013729	cnot3a	100	89.352	Oryzias_latipes_hsok
ENSMZEG00005016304	cnot3a	100	91.118	ENSOMEG00000010309	cnot3a	100	90.789	Oryzias_melastigma
ENSMZEG00005016304	cnot3a	77	73.945	ENSOGAG00000006945	CNOT3	84	90.132	Otolemur_garnettii
ENSMZEG00005016304	cnot3a	51	91.444	ENSOARG00000002981	CNOT3	66	91.444	Ovis_aries
ENSMZEG00005016304	cnot3a	68	89.836	ENSPPAG00000002748	CNOT3	84	90.132	Pan_paniscus
ENSMZEG00005016304	cnot3a	68	88.746	ENSPPRG00000011705	CNOT3	85	90.132	Panthera_pardus
ENSMZEG00005016304	cnot3a	62	90.268	ENSPTIG00000008781	CNOT3	96	90.268	Panthera_tigris_altaica
ENSMZEG00005016304	cnot3a	68	89.836	ENSPTRG00000046717	-	84	90.132	Pan_troglodytes
ENSMZEG00005016304	cnot3a	68	89.836	ENSPTRG00000011444	CNOT3	84	90.132	Pan_troglodytes
ENSMZEG00005016304	cnot3a	68	89.836	ENSPANG00000009375	CNOT3	85	90.132	Papio_anubis
ENSMZEG00005016304	cnot3a	68	94.872	ENSPKIG00000015967	-	90	89.020	Paramormyrops_kingsleyae
ENSMZEG00005016304	cnot3a	100	66.842	ENSPKIG00000011733	CNOT3	78	55.939	Paramormyrops_kingsleyae
ENSMZEG00005016304	cnot3a	98	60.884	ENSPMGG00000022539	cnot3b	55	48.542	Periophthalmus_magnuspinnatus
ENSMZEG00005016304	cnot3a	63	90.551	ENSPEMG00000024185	Cnot3	85	90.461	Peromyscus_maniculatus_bairdii
ENSMZEG00005016304	cnot3a	68	89.508	ENSPCIG00000023018	CNOT3	90	89.803	Phascolarctos_cinereus
ENSMZEG00005016304	cnot3a	100	88.403	ENSPFOG00000008693	cnot3a	92	96.689	Poecilia_formosa
ENSMZEG00005016304	cnot3a	100	88.816	ENSPLAG00000013324	cnot3a	100	88.268	Poecilia_latipinna
ENSMZEG00005016304	cnot3a	100	89.047	ENSPMEG00000017718	cnot3a	100	88.499	Poecilia_mexicana
ENSMZEG00005016304	cnot3a	100	85.978	ENSPREG00000007592	cnot3a	100	95.142	Poecilia_reticulata
ENSMZEG00005016304	cnot3a	68	89.508	ENSPPYG00000010372	CNOT3	84	89.803	Pongo_abelii
ENSMZEG00005016304	cnot3a	58	91.525	ENSPCAG00000011999	CNOT3	56	91.525	Procavia_capensis
ENSMZEG00005016304	cnot3a	68	89.836	ENSPCOG00000017673	CNOT3	85	90.132	Propithecus_coquereli
ENSMZEG00005016304	cnot3a	68	88.424	ENSPVAG00000015564	CNOT3	85	89.803	Pteropus_vampyrus
ENSMZEG00005016304	cnot3a	100	99.780	ENSPNYG00000002282	cnot3a	100	99.780	Pundamilia_nyererei
ENSMZEG00005016304	cnot3a	100	74.166	ENSPNAG00000017679	cnot3a	100	75.000	Pygocentrus_nattereri
ENSMZEG00005016304	cnot3a	66	90.288	ENSRNOG00000053234	Cnot3	85	90.461	Rattus_norvegicus
ENSMZEG00005016304	cnot3a	77	73.945	ENSRBIG00000031025	CNOT3	85	90.132	Rhinopithecus_bieti
ENSMZEG00005016304	cnot3a	77	74.194	ENSRROG00000003872	CNOT3	85	90.132	Rhinopithecus_roxellana
ENSMZEG00005016304	cnot3a	75	89.836	ENSSBOG00000030268	CNOT3	84	90.132	Saimiri_boliviensis_boliviensis
ENSMZEG00005016304	cnot3a	100	70.378	ENSSFOG00015000248	cnot3	100	69.770	Scleropages_formosus
ENSMZEG00005016304	cnot3a	100	92.375	ENSSMAG00000013235	cnot3a	100	92.702	Scophthalmus_maximus
ENSMZEG00005016304	cnot3a	100	92.560	ENSSDUG00000008181	cnot3a	100	95.547	Seriola_dumerili
ENSMZEG00005016304	cnot3a	96	94.886	ENSSLDG00000014733	cnot3a	99	94.886	Seriola_lalandi_dorsalis
ENSMZEG00005016304	cnot3a	68	89.610	ENSSPUG00000008510	CNOT3	88	90.132	Sphenodon_punctatus
ENSMZEG00005016304	cnot3a	96	94.886	ENSSPAG00000003858	cnot3a	98	95.455	Stegastes_partitus
ENSMZEG00005016304	cnot3a	68	89.836	ENSSSCG00000003264	CNOT3	84	90.132	Sus_scrofa
ENSMZEG00005016304	cnot3a	100	91.109	ENSTRUG00000015732	cnot3a	100	91.218	Takifugu_rubripes
ENSMZEG00005016304	cnot3a	94	87.082	ENSTNIG00000008082	cnot3a	100	86.079	Tetraodon_nigroviridis
ENSMZEG00005016304	cnot3a	68	90.164	ENSUAMG00000005234	CNOT3	85	90.461	Ursus_americanus
ENSMZEG00005016304	cnot3a	61	88.849	ENSUMAG00000010934	CNOT3	89	92.857	Ursus_maritimus
ENSMZEG00005016304	cnot3a	67	89.836	ENSVVUG00000008239	CNOT3	83	90.132	Vulpes_vulpes
ENSMZEG00005016304	cnot3a	69	87.220	ENSXETG00000003166	cnot3	88	89.320	Xenopus_tropicalis
ENSMZEG00005016304	cnot3a	94	92.793	ENSXCOG00000019460	cnot3a	97	99.145	Xiphophorus_couchianus
ENSMZEG00005016304	cnot3a	100	87.816	ENSXMAG00000012273	cnot3a	100	86.404	Xiphophorus_maculatus