EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005016621 (Gene tree)
Gene ID: 101485407
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 3248 bases
Position: chrLG14:20996848-21000095
Accession: 101485407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005022163	MMR_HSR1	PF01926.23	9.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005022905	-	777	XM_004543634	ENSMZEP00005022163	258 (aa)	XP_004543691	-

Gene Model

Click here to download ENSMZEG00005016621's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005016621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005016621	srprb	100	91.892	ENSAPOG00000021219	srprb	93	91.892	Acanthochromis_polyacanthus
ENSMZEG00005016621	srprb	100	93.822	ENSACIG00000014621	srprb	97	93.822	Amphilophus_citrinellus
ENSMZEG00005016621	srprb	100	91.506	ENSAOCG00000017265	srprb	93	91.506	Amphiprion_ocellaris
ENSMZEG00005016621	srprb	100	91.506	ENSAPEG00000024541	srprb	82	91.506	Amphiprion_percula
ENSMZEG00005016621	srprb	99	88.760	ENSATEG00000014016	srprb	93	88.760	Anabas_testudineus
ENSMZEG00005016621	srprb	100	99.228	ENSACLG00000016748	srprb	94	99.228	Astatotilapia_calliptera
ENSMZEG00005016621	srprb	98	75.099	ENSAMXG00000044118	srprb	95	75.099	Astyanax_mexicanus
ENSMZEG00005016621	srprb	100	87.259	ENSCSEG00000017194	srprb	94	87.259	Cynoglossus_semilaevis
ENSMZEG00005016621	srprb	100	87.259	ENSCVAG00000004221	srprb	97	87.259	Cyprinodon_variegatus
ENSMZEG00005016621	srprb	98	71.937	ENSDARG00000030949	srprb	95	71.937	Danio_rerio
ENSMZEG00005016621	srprb	98	82.677	ENSELUG00000009740	srprb	93	82.677	Esox_lucius
ENSMZEG00005016621	srprb	100	88.417	ENSFHEG00000006004	srprb	97	88.417	Fundulus_heteroclitus
ENSMZEG00005016621	srprb	99	82.812	ENSGMOG00000002081	srprb	94	82.812	Gadus_morhua
ENSMZEG00005016621	srprb	100	86.486	ENSGAFG00000012593	srprb	97	86.486	Gambusia_affinis
ENSMZEG00005016621	srprb	100	88.031	ENSGACG00000009891	srprb	95	88.031	Gasterosteus_aculeatus
ENSMZEG00005016621	srprb	100	99.228	ENSHBUG00000002145	srprb	94	99.228	Haplochromis_burtoni
ENSMZEG00005016621	srprb	99	83.333	ENSHCOG00000007732	srprb	96	83.333	Hippocampus_comes
ENSMZEG00005016621	srprb	98	69.170	ENSIPUG00000004177	srprb	94	69.170	Ictalurus_punctatus
ENSMZEG00005016621	srprb	99	85.156	ENSKMAG00000020736	srprb	96	85.156	Kryptolebias_marmoratus
ENSMZEG00005016621	srprb	99	89.535	ENSLBEG00000021483	srprb	93	89.535	Labrus_bergylta
ENSMZEG00005016621	srprb	100	71.815	ENSLOCG00000009740	srprb	87	71.815	Lepisosteus_oculatus
ENSMZEG00005016621	srprb	100	89.189	ENSMAMG00000011876	srprb	94	89.189	Mastacembelus_armatus
ENSMZEG00005016621	srprb	100	87.259	ENSMMOG00000012550	srprb	95	87.259	Mola_mola
ENSMZEG00005016621	srprb	100	88.417	ENSMALG00000012595	srprb	94	88.417	Monopterus_albus
ENSMZEG00005016621	srprb	81	90.909	ENSNBRG00000004699	srprb	88	90.909	Neolamprologus_brichardi
ENSMZEG00005016621	srprb	100	97.683	ENSONIG00000003788	srprb	77	97.683	Oreochromis_niloticus
ENSMZEG00005016621	srprb	100	81.467	ENSORLG00000006430	srprb	94	81.467	Oryzias_latipes
ENSMZEG00005016621	srprb	100	81.853	ENSORLG00020003413	srprb	94	81.853	Oryzias_latipes_hni
ENSMZEG00005016621	srprb	100	81.853	ENSORLG00015000166	srprb	94	81.853	Oryzias_latipes_hsok
ENSMZEG00005016621	srprb	100	84.170	ENSOMEG00000012735	srprb	94	84.170	Oryzias_melastigma
ENSMZEG00005016621	srprb	97	71.825	ENSPKIG00000013147	srprb	95	71.825	Paramormyrops_kingsleyae
ENSMZEG00005016621	srprb	99	84.825	ENSPMGG00000014061	srprb	94	84.825	Periophthalmus_magnuspinnatus
ENSMZEG00005016621	srprb	100	87.259	ENSPFOG00000011347	srprb	93	87.259	Poecilia_formosa
ENSMZEG00005016621	srprb	100	87.259	ENSPLAG00000001156	srprb	100	87.259	Poecilia_latipinna
ENSMZEG00005016621	srprb	100	86.873	ENSPMEG00000012169	srprb	100	86.873	Poecilia_mexicana
ENSMZEG00005016621	srprb	100	86.100	ENSPREG00000001449	srprb	100	86.100	Poecilia_reticulata
ENSMZEG00005016621	srprb	100	99.228	ENSPNYG00000005911	srprb	94	99.228	Pundamilia_nyererei
ENSMZEG00005016621	srprb	98	74.704	ENSPNAG00000009983	srprb	95	74.704	Pygocentrus_nattereri
ENSMZEG00005016621	srprb	98	74.510	ENSSFOG00015019355	srprb	95	74.510	Scleropages_formosus
ENSMZEG00005016621	srprb	100	87.645	ENSSMAG00000013202	srprb	94	87.645	Scophthalmus_maximus
ENSMZEG00005016621	srprb	100	90.347	ENSSDUG00000018746	srprb	88	90.347	Seriola_dumerili
ENSMZEG00005016621	srprb	100	90.734	ENSSLDG00000020560	srprb	94	90.734	Seriola_lalandi_dorsalis
ENSMZEG00005016621	srprb	100	91.892	ENSSPAG00000008898	srprb	93	91.892	Stegastes_partitus
ENSMZEG00005016621	srprb	100	85.328	ENSTRUG00000022463	srprb	94	86.486	Takifugu_rubripes
ENSMZEG00005016621	srprb	99	82.879	ENSTNIG00000007725	srprb	98	82.879	Tetraodon_nigroviridis
ENSMZEG00005016621	srprb	100	87.259	ENSXCOG00000012585	srprb	100	87.259	Xiphophorus_couchianus
ENSMZEG00005016621	srprb	100	86.873	ENSXMAG00000028725	srprb	100	86.873	Xiphophorus_maculatus